prot_H-elongata_contig50779.12329.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50779.12329.1
Unique Nameprot_H-elongata_contig50779.12329.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
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BLAST of mRNA_H-elongata_contig50779.12329.1 vs. uniprot
Match: D7G542_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G542_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.080e-11
Identity = 37/42 (88.10%), Postives = 41/42 (97.62%), Query Frame = 0 
Query:   29 VEADVPSGERYEDLSRKVEEEVVAKLARAQMMGMMLKAHRDQ 70
            V+ADVPS ERYED+SR+VEEEVVAKLARAQMMGMMLKAHR+Q
Sbjct:   92 VDADVPSEERYEDMSRRVEEEVVAKLARAQMMGMMLKAHREQ 133
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50779.12329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G542_ECTSI2.080e-1188.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50779contigH-elongata_contig50779:720..1196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50779.12329.1mRNA_H-elongata_contig50779.12329.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50779 720..1198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50779.12329.1 ID=prot_H-elongata_contig50779.12329.1|Name=mRNA_H-elongata_contig50779.12329.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
RGSSRASSTAAVTTSEARSVGGPPAPDEVEADVPSGERYEDLSRKVEEEV
VAKLARAQMMGMMLKAHRDQQHQQQHHGNHALEKRRARGGVRRDGGSISV
SGSGSSTVNNSRRSRAGSSRQRGGPSPNPSATAISPAAAAAPTRRLTSDT
RVGAKIAAG
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