prot_H-elongata_contig50710.12319.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50710.12319.1
Unique Nameprot_H-elongata_contig50710.12319.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length273
Homology
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: D7G786_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G786_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 6.140e-77
Identity = 192/295 (65.08%), Postives = 201/295 (68.14%), Query Frame = 0
Query:    1 MAGAGGDFHDIMRLFFDRNLRFWHRGWLEERRRQREGRWRHSGPIGGGGEVAGDATEVSDGCETAEARDEIATMMEQTGEEKQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------FVDMSTEELLELWGVLRRLGWFSLLQDTFSGVMSSNVHAYVR-SRKETLEWEEDPTDPAIGWSQRLGLAVHQAFCSARIAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPK 273
            MAGA GDFH  MR FFDRNLRFWHR WLEER                     GD  +VSD        D++    E  G + + +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     F DMS EEL  LWGVLRRLGWFSLLQD FSGVM SNV AYVR S         D +  A GW QRLGLAVH+AFCSARIAELFDIIADYPDS V IGELKTALGVTQQH  LAV LRESVRRRLLHPGANTHQI+DVYIATIKVLRILD K
Sbjct:    1 MAGARGDFHGTMRAFFDRNLRFWHRSWLEERXXXXXXXXXXXXXXXXXXVEGGDGMDVSD--------DDLGAGEENRGSDGEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGXXXXGDDFSDMSREELSALWGVLRRLGWFSLLQDAFSGVMFSNVLAYVRRSGGGXGGVPVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDSGVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIMDVYIATIKVLRILDRK 287          
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: A0A7S4UVG3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UVG3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 9.310e-26
Identity = 68/164 (41.46%), Postives = 92/164 (56.10%), Query Frame = 0
Query:  133 LELWGVLRRLGW-----------------FSLLQDTFSGVMS-SNVHAYVRSRKETL--EWEEDPTDPAI----GWSQRLGLAVHQAFCSARIAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP 272
            L+L+  LR LGW                 ++ +Q   +G    S +   + S K+++   W +D   P +     W + L  A  + FC  RI E+FDI+ADYPDS   I EL  AL  T+ H  LAV+LR+S++RRL+HPGANT QIIDVYI TIKV R +DP
Sbjct:  152 LDLYDSLRTLGWIHTKLSRPLGEAIHQTIYTAVQQKIAGEYEDSTLFTSIMSWKDSVVVPWVQDVISPTLYTTLNWDRTLDYAASECFCEIRIKEIFDIVADYPDSLPAIRELAQALDRTRMHGKLAVELRKSLKRRLIHPGANTSQIIDVYINTIKVFREIDP 315          
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: A0A7S4RA98_9STRA (Anaphase-promoting complex subunit 2 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RA98_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.270e-25
Identity = 68/164 (41.46%), Postives = 92/164 (56.10%), Query Frame = 0
Query:  133 LELWGVLRRLGW-----------------FSLLQDTFSGVMS-SNVHAYVRSRKETL--EWEEDPTDPAI----GWSQRLGLAVHQAFCSARIAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP 272
            L+L+  LR LGW                 ++ +Q   +G    S +   + S K+++   W +D   P +     W + L  A  + FC  RI E+FDI+ADYPDS   I EL  AL  T+ H  LAV+LR+S++RRL+HPGANT QIIDVYI TIKV R +DP
Sbjct:  152 LDLYDSLRTLGWIHTKLSRPLGEAIHQTIYTAVQQKIAGEYEDSTLFTSIMSWKDSVVVPWVQDVISPTLYTTLNWDRTLDYAASECFCEIRIKEIFDIVADYPDSLPAIRELAQALDRTRMHGKLAVELRKSLKRRLIHPGANTSQIIDVYINTIKVFREIDP 315          
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: A0A7S2NZF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZF2_9STRA)

HSP 1 Score: 104 bits (259), Expect = 7.740e-24
Identity = 69/169 (40.83%), Postives = 89/169 (52.66%), Query Frame = 0
Query:  142 LGWFSLLQDTFS-------GVMSSNVHAYV----RSRKET-------LEWEEDPTDPAI--------------GWSQRLGLAVHQAFCSARIAE-LFDIIADYPDSAVTIGELKTAL-----GVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP 272
            LGW S    T         G + S +  +V    RS  ET       ++W+E    P +               W  +L LAV +AFC+ RI E +FDII DYPDS   + EL+ AL     G+      L V+LR S+R+RLLHPGA T QI+DVYIATIKVLR++DP
Sbjct:    1 LGWLSSSASTMGSVRKSLLGALHSTIQDFVTNTARSDYETELFTAVIMKWKESVVVPFVRAALRHDMDAFVREDWDNQLNLAVSEAFCNLRITEEMFDIITDYPDSETAVIELRDALFRFHTGMHYFSKRLTVELRASLRKRLLHPGAQTSQILDVYIATIKVLRLIDP 169          
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: A0A7S2WSZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSZ1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 6.260e-23
Identity = 52/89 (58.43%), Postives = 67/89 (75.28%), Query Frame = 0
Query:  184 WSQRLGLAVHQAFCSARIAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP 272
            W   +   V+  FCS+RI EL+DIIA++PDSA  + EL+ AL  TQQH  LA +LRE++ RR LHPGA T QII++YI+TIKVLR+LDP
Sbjct:  135 WEDFVENTVYDMFCSSRIHELYDIIAEFPDSASAVLELRGALTKTQQHAVLASRLRETLTRRSLHPGATTTQIIEIYISTIKVLRLLDP 223          
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: A0A7S2G590_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G590_9STRA)

HSP 1 Score: 101 bits (251), Expect = 8.350e-22
Identity = 45/90 (50.00%), Postives = 65/90 (72.22%), Query Frame = 0
Query:  183 GWSQRLGLAVHQAFCSARIAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP 272
            GW   L L +HQ FC AR   +FD+I ++PDS V + EL+ A+  T Q+  LA  LR ++++R+LHPGA T Q+I++YI+TIKV+R+LDP
Sbjct:   90 GWRASLSLTLHQLFCEARTDSIFDMITEFPDSIVAVKELRDAVEYTAQYTPLAQALRSTLQKRILHPGATTTQVIEIYISTIKVVRLLDP 179          
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: A0A1E7F4J4_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4J4_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.640e-21
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 0
Query:  167 RKETLEWEEDPTDPAI---GWSQRLGLAVHQAFCSARIAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP 272
            ++  L W ED   P+I    WS RL  AV + FC  R+ E+F+++A+YPDS   + ELK  L +T+ H  +A  L+ ++ +RL HPGANT QIIDVYI TIKV R +DP
Sbjct:   10 KRVILPWLEDLVGPSILQEKWSSRLDFAVSECFCLVRMEEIFELVAEYPDSHTAVVELKKVLEITRMHQAMARALKIALVKRLNHPGANTSQIIDVYINTIKVFREIDP 118          
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: F0YL58_AURAN (Anaphase-promoting complex subunit 2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL58_AURAN)

HSP 1 Score: 100 bits (248), Expect = 4.210e-20
Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 0
Query:  188 LGLAVHQAFCSARIAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPK 273
            + L + + +  ARI EL+DIIAD+P+S   + EL+  L  TQQH  LA  LR +++RRLLH GAN+ QIIDVYI+TIKVLRILDP+
Sbjct:  205 VNLVIDENYVRARINELYDIIADFPESMCAVNELRATLSRTQQHQLLARSLRSTLQRRLLHSGANSSQIIDVYISTIKVLRILDPR 290          
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: A0A2D4BN90_PYTIN (Anaphase-promoting complex subunit 2 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN90_PYTIN)

HSP 1 Score: 100 bits (248), Expect = 4.460e-20
Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 0
Query:  184 WSQRLGLAVHQAFCSARIAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPK 273
            WS+RL L V +AF S RI +LFDII +YPDS   + +LK+ L  TQQH+ L  + R+ +  RLLHPGANT  I+D+Y++TIK  R LDP+
Sbjct:  311 WSERLALDVVRAFVSWRIEQLFDIIKEYPDSTPALEDLKSCLDRTQQHVELTQRFRDVLVTRLLHPGANTSAILDIYVSTIKAFRFLDPR 400          
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Match: A0A7S1TR82_9STRA (Anaphase-promoting complex subunit 2 n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR82_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.720e-19
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0
Query:  186 QRLGLAVHQAFCSARIAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP 272
            QR+   +++ FC+ RIAE+F+II D+PDSA  + ELK AL   +    LA  LR + + RLLHPGA T+Q+IDVYIAT+K LR+LDP
Sbjct:  246 QRVEFLLYERFCTVRIAEMFEIITDFPDSACAVEELKVALQRARLQPQLAAALRGAFQARLLHPGATTNQVIDVYIATVKSLRLLDP 332          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50710.12319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G786_ECTSI6.140e-7765.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4UVG3_9STRA9.310e-2641.46Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RA98_9STRA2.270e-2541.46Anaphase-promoting complex subunit 2 n=2 Tax=Dityl... [more]
A0A7S2NZF2_9STRA7.740e-2440.83Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2WSZ1_9STRA6.260e-2358.43Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2G590_9STRA8.350e-2250.00Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A1E7F4J4_9STRA1.640e-2147.71Anaphase-promoting complex subunit 2 n=1 Tax=Fragi... [more]
F0YL58_AURAN4.210e-2056.98Anaphase-promoting complex subunit 2 n=1 Tax=Aureo... [more]
A0A2D4BN90_PYTIN4.460e-2053.33Anaphase-promoting complex subunit 2 n=2 Tax=Pythi... [more]
A0A7S1TR82_9STRA3.720e-1954.02Anaphase-promoting complex subunit 2 n=4 Tax=Phaeo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..122
NoneNo IPR availablePANTHERPTHR45957FAMILY NOT NAMEDcoord: 177..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50710contigH-elongata_contig50710:152..2149 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50710.12319.1mRNA_H-elongata_contig50710.12319.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50710 152..2149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50710.12319.1 ID=prot_H-elongata_contig50710.12319.1|Name=mRNA_H-elongata_contig50710.12319.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=273bp
MAGAGGDFHDIMRLFFDRNLRFWHRGWLEERRRQREGRWRHSGPIGGGGE
VAGDATEVSDGCETAEARDEIATMMEQTGEEKQEQCGGRREEDGEQDTQQ
QQEEEEEEEEDSEEEQEDSEDDDFVDMSTEELLELWGVLRRLGWFSLLQD
TFSGVMSSNVHAYVRSRKETLEWEEDPTDPAIGWSQRLGLAVHQAFCSAR
IAELFDIIADYPDSAVTIGELKTALGVTQQHLWLAVQLRESVRRRLLHPG
ANTHQIIDVYIATIKVLRILDPK
back to top