prot_H-elongata_contig50103.12238.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig50103.12238.1
Unique Name	prot_H-elongata_contig50103.12238.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	36

Homology

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BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: D7G213_ECTSI (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G213_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 6.760e-8
Identity = 23/31 (74.19%), Postives = 29/31 (93.55%), Query Frame = 0

Query:    4 FQFWETRRSDFNQMLVHHLATLFLLSYSWLM 34
            FQFW+TRRSDF QMLVHH+AT+ LL++SWL+
Sbjct:  200 FQFWDTRRSDFAQMLVHHVATISLLTFSWLL 230

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BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: A0A835GDQ9_SPOEX (TLC domain-containing protein (Fragment) n=2 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835GDQ9_SPOEX)

HSP 1 Score: 48.1 bits (113), Expect = 2.460e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    5 QFWETRRSDFNQMLVHHLATLFLLSYSW 32
            QFW+ RR DF QM VHH+AT+ LLS+SW
Sbjct:   98 QFWDVRRKDFWQMFVHHIATILLLSFSW 125

[Close]

BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: A0A2H1VPF7_SPOFR (SFRICE_007394 n=2 Tax=Spodoptera TaxID=7106 RepID=A0A2H1VPF7_SPOFR)

HSP 1 Score: 48.1 bits (113), Expect = 2.510e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    5 QFWETRRSDFNQMLVHHLATLFLLSYSW 32
            QFW+ RR DF QM VHH+AT+ LLS+SW
Sbjct:  109 QFWDVRRKDFWQMFVHHIATILLLSFSW 136

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BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: A0A2W1BKB4_HELAM (TLC domain-containing protein n=2 Tax=Obtectomera TaxID=104431 RepID=A0A2W1BKB4_HELAM)

HSP 1 Score: 48.1 bits (113), Expect = 2.560e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    5 QFWETRRSDFNQMLVHHLATLFLLSYSW 32
            QFW+ RR DF QM VHH+AT+ LLS+SW
Sbjct:  105 QFWDVRRKDFWQMFVHHIATILLLSFSW 132

[Close]

BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: A0A835L8A2_SPOEX (TLC domain-containing protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835L8A2_SPOEX)

HSP 1 Score: 48.1 bits (113), Expect = 2.600e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    5 QFWETRRSDFNQMLVHHLATLFLLSYSW 32
            QFW+ RR DF QM VHH+AT+ LLS+SW
Sbjct:   99 QFWDVRRKDFWQMFVHHIATILLLSFSW 126

[Close]

BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: A0A8N7X8J5_SPOFR (ceramide synthase 6-like isoform X1 n=8 Tax=Spodoptera TaxID=7106 RepID=A0A8N7X8J5_SPOFR)

HSP 1 Score: 48.1 bits (113), Expect = 2.600e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    5 QFWETRRSDFNQMLVHHLATLFLLSYSW 32
            QFW+ RR DF QM VHH+AT+ LLS+SW
Sbjct:  205 QFWDVRRKDFWQMFVHHIATIMLLSFSW 232

[Close]

BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: UPI000B3838A5 (ceramide synthase 6-like isoform X1 n=2 Tax=Helicoverpa TaxID=7112 RepID=UPI000B3838A5)

HSP 1 Score: 48.1 bits (113), Expect = 2.600e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    5 QFWETRRSDFNQMLVHHLATLFLLSYSW 32
            QFW+ RR DF QM VHH+AT+ LLS+SW
Sbjct:  196 QFWDVRRKDFWQMFVHHIATILLLSFSW 223

[Close]

BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: A0A437BFD0_CHISP (Uncharacterized protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A437BFD0_CHISP)

HSP 1 Score: 48.1 bits (113), Expect = 2.600e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    5 QFWETRRSDFNQMLVHHLATLFLLSYSW 32
            QFW+ RR DF QM VHH+AT+ LLS+SW
Sbjct:  196 QFWDVRRKDFWQMFVHHIATILLLSFSW 223

[Close]

BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: A0A8J2MXE2_9NEOP ((African queen) hypothetical protein n=3 Tax=Nymphalidae TaxID=33415 RepID=A0A8J2MXE2_9NEOP)

HSP 1 Score: 48.1 bits (113), Expect = 2.600e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    5 QFWETRRSDFNQMLVHHLATLFLLSYSW 32
            QFW+ RR DF QM VHH+AT+ LLS+SW
Sbjct:  198 QFWDVRRKDFWQMFVHHIATILLLSFSW 225

[Close]

BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Match: A0A2W1BHT5_HELAM (TLC domain-containing protein n=6 Tax=Noctuidae TaxID=7100 RepID=A0A2W1BHT5_HELAM)

HSP 1 Score: 48.1 bits (113), Expect = 2.600e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    5 QFWETRRSDFNQMLVHHLATLFLLSYSW 32
            QFW+ RR DF QM VHH+AT+ LLS+SW
Sbjct:  196 QFWDVRRKDFWQMFVHHIATILLLSFSW 223

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot

BLAST of mRNA_H-elongata_contig50103.12238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G213_ECTSI	6.760e-8	74.19	TLC domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835GDQ9_SPOEX	2.460e-5	67.86	TLC domain-containing protein (Fragment) n=2 Tax=S...	[more]
A0A2H1VPF7_SPOFR	2.510e-5	67.86	SFRICE_007394 n=2 Tax=Spodoptera TaxID=7106 RepID=...	[more]
A0A2W1BKB4_HELAM	2.560e-5	67.86	TLC domain-containing protein n=2 Tax=Obtectomera ...	[more]
A0A835L8A2_SPOEX	2.600e-5	67.86	TLC domain-containing protein n=1 Tax=Spodoptera e...	[more]
A0A8N7X8J5_SPOFR	2.600e-5	67.86	ceramide synthase 6-like isoform X1 n=8 Tax=Spodop...	[more]
UPI000B3838A5	2.600e-5	67.86	ceramide synthase 6-like isoform X1 n=2 Tax=Helico...	[more]
A0A437BFD0_CHISP	2.600e-5	67.86	Uncharacterized protein n=1 Tax=Chilo suppressalis...	[more]
A0A8J2MXE2_9NEOP	2.600e-5	67.86	(African queen) hypothetical protein n=3 Tax=Nymph...	[more]
A0A2W1BHT5_HELAM	2.600e-5	67.86	TLC domain-containing protein n=6 Tax=Noctuidae Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 5..33 e-value: 2.4E-6 score: 27.4
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 1..35 score: 8.685
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..13
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 14..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..35
None	No IPR available	TMHMM	TMhelix		coord: 17..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig50103	contig	H-elongata_contig50103:3996..4103 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig50103.12238.1	mRNA_H-elongata_contig50103.12238.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig50103 3966..4103 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig50103.12238.1 ID=prot_H-elongata_contig50103.12238.1|Name=mRNA_H-elongata_contig50103.12238.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=36bp
MHAFQFWETRRSDFNQMLVHHLATLFLLSYSWLMR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006634	TLC-dom