prot_H-elongata_contig50067.12229.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50067.12229.1
Unique Nameprot_H-elongata_contig50067.12229.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length574
Homology
BLAST of mRNA_H-elongata_contig50067.12229.1 vs. uniprot
Match: A0A6H5JW68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW68_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 2.930e-101
Identity = 150/273 (54.95%), Postives = 198/273 (72.53%), Query Frame = 0
Query:  280 WDNLHFFIGKIAANQFVQNVPSWDAVKRERIAGVVKKFRESFHEFPRPSYDHAPKCSYSQDHGVLDIALHVRLGDRKNYFHDNGLGHFEHLEAFMETVTEAVLAHGYQSPMFHVFSETSLPCPD-DRGIFSEFPIWPVEINQVTECLTAMTPETCPEKLAGAPECNPDRSGIFRVAGKDLYLHVGLDVQNDLSCMIQADGILMGCSTFGQMAGVLGKGIKFFSFECSGKKTPNHYKMMPTLAVAEKGYMWVPISGSWHNPAIASRPIFEAALE 551
            W+     +  + A ++   V SW+A KRE +  V+  F++SFH FPRP  +  P+C++SQ    LDIA+HVRLGDRK+  +D+   +F++LE FMETV  A +A G   P+FH+FSET   CP  + G F EFP WPVE++QV+ C+ A TPE CPEK AGAP CNP RSGIF V G+++ LHVGLDVQNDLSCM  A+G+LMGCSTFGQ+AGVL KGI+FFS EC+G +T   YK++P +A+A +G+MWVP+SGSWH+P IAS  I  A+L+
Sbjct:   15 WNQWLLMMNLMTAPRYFSAVGSWNARKREAVRTVLHTFKQSFHTFPRPWNNIQPECAFSQS--KLDIAIHVRLGDRKDSLNDDS--YFDYLEDFMETVASAAIARGQDHPVFHIFSETHSRCPSAENGAFEEFPKWPVEMDQVSTCMEATTPEECPEKDAGAPSCNPTRSGIFAVDGREMNLHVGLDVQNDLSCMANANGVLMGCSTFGQVAGVLSKGIRFFSTECAGWRTTIQYKLIPPMAIAGRGHMWVPVSGSWHDPVIASESILGASLD 283          
BLAST of mRNA_H-elongata_contig50067.12229.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 1.830e-81
Identity = 168/417 (40.29%), Postives = 234/417 (56.12%), Query Frame = 0
Query:  157 SVRNLATWMVAEEMGCDWAAPTLSSERI--DDKGTLMYCHKTVTVNQLHATAAEDFMGNIDPANFPDRIFRCEVVNWLEYFRFREHGITHIMGGKTKRILLNVKDSNAVLQ-ARREYNSSPEGVRPWDNLHFFIGKI-AANQFVQNVPSWDAVKRERIAGVVKKFRESFHEFPRPSYDHAPKCSYSQDHGVLDIALHVRLGDRKNYFHDNGLG--HFEHLEAFMETVTEAVLAHGYQSPMFHVFSETSLPCP-DDRGIFSEFPIWPVEINQVTECLTAMTPETCPEKLAGAPECNPDRSGIFRVAGKDLYLHVGLDVQNDLSCMIQADGILMGCSTFGQMAGVL-GKGIKFFSFECSGKKTPNHYKMMPTLAVAEKGYMWVPISGSWHNPAIASRPIFEAALENYGKEKQGIPYLSR 565
            ++R+LA  + AEE+GCDW  P+     +  D  G  +YCH   T ++          GN         + RC VVNW EYF      +  +    T R++      N  L+ A +E +++      WD L   + +  A++ F+ ++ SWD  KRE +  V+++FRE+FH+ PRP Y+  P+C Y +    L+ ALHVR+GDR+      G+   +F  LE FM TVT+AV+     +PMFHVFSE   PCP  +   F+EFP WPVE +QV+ C     P    E+    P   PD    FRV G+ + LH+G +    LSCM+ ADG+LMGCSTFGQ+AGVL G GI FFS EC G   P   KM+P LAVAE+G MWVPI+GSW +P + ++ +F A L+   K KQG   + R
Sbjct:    2 TMRHLAAKIFAEEVGCDWLTPSQWGMPVAGDGSGASVYCHSAATYDEQRRG-----FGNATKDEAEIMVHRCSVVNWPEYFNLNASSV-ELPANCTFRVVEADTSRNHDLEMALKETDANGFDNLGWDRLKIVLRQPHASSNFLASLGSWDGWKREVVRKVLRQFRENFHQSPRPWYNDEPECGYEESE--LNFALHVRMGDRREL---EGVTPEYFSLLEGFMATVTQAVVEREQAAPMFHVFSEALYPCPFPENATFTEFPFWPVERDQVSVC-----PRNAAEQ--DGPASRPD---TFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDGISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHVFSAVLDELLKRKQGSTRVPR 397          
BLAST of mRNA_H-elongata_contig50067.12229.1 vs. uniprot
Match: D7G5J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J8_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 4.230e-75
Identity = 115/201 (57.21%), Postives = 147/201 (73.13%), Query Frame = 0
Query:  352 LGDRKNYFHDNGLGHFEHLEAFMETVTEAVLAHGYQSPMFHVFSETSLPCPDD-RGIFSEFPIWPVEINQVTECLTAMTPETCPEKLAGAPECNPDRSGIFRVAGKDLYLHVGLDVQNDLSCMIQADGILMGCSTFGQMAGVLGKGIKFFSFECSGKKTPNHYKMMPTLAVAEKGYMWVPISGSWHNPAIASRPIFEAALE 551
            +GDR+  F+D  L +F ++E  METV +     G   P+FHVFSET  PCP    G+F EFPIWPVE++++ ECL A TP  CPEK AG   C P R+GIFR+  K + LHVG DVQN++SCMIQADG+LMGCSTFGQ+AG+L +GI  FS  CSG+ TP+ Y+ +P LA+AEKG++WVPI GSWH+P + SR IF AAL+
Sbjct:    1 MGDRRA-FYDGSLQYFHNVELIMETVADEFRERGLPEPLFHVFSETLSPCPSTVTGLFDEFPIWPVELDKIEECLAAATPIDCPEKQAGT-FCTPKRAGIFRIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISLFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLTSRSIFSAALD 199          
BLAST of mRNA_H-elongata_contig50067.12229.1 vs. uniprot
Match: A0A6H5L814_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L814_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.630e-56
Identity = 114/242 (47.11%), Postives = 146/242 (60.33%), Query Frame = 0
Query:  329 YDHAPKCSYSQDHGVLDIALHVRLGDRKNYFHDNGLG--HFEHLEAFMETVTEAVLAHGYQSPMFHVFSETSLPCPD-DRGIFSEFPIWPVEINQVT-----ECLTAMTPETCPEKLAGAPE--CNPDRSGIFRVAGKDLYLHVGLDVQNDLSCMIQADGILMGCSTFGQMAGVL-GKGIKFFSFECSGKKTPNHYKMMPTLAVAEKGYMWVPISGSWHNPAIASRPIFEAALENYGKEKQG 559
            Y+  P C Y +    L+ ALHVR+GDR+      G+   +F  LE FM TVT+AV+     +PMFHVFSE   PCP  +   F+EFP+WPVE +QV        L +++ E     L  A E      R G FRV G+ + LH+G +    LSCM+ ADG+LMGCSTFGQ+AGVL G  I FFS EC G   P   KM+P LAVAE+G MWVPI+GSW +P + ++ IF AAL+   K K G
Sbjct:   14 YNDEPGCGYEESQ--LNFALHVRMGDRREL---EGVTPEYFSLLEDFMATVTQAVVEREQAAPMFHVFSEALYPCPSPENATFTEFPLWPVERDQVDLNVSLHRLFSLSNEKVSVCLRNAAEQGAPASRKGTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDRISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHIFSAALDALLKRKAG 250          
BLAST of mRNA_H-elongata_contig50067.12229.1 vs. uniprot
Match: A0A6H5JXM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM8_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 2.360e-50
Identity = 85/186 (45.70%), Postives = 117/186 (62.90%), Query Frame = 0
Query:  374 METVTEAVLAHGYQSPMFHVFSETSLPCPD-DRGIFSEFPIWPVEINQVTECLTAMTPETCPEKLAGAPECNPDRSGIFRVAGKDLYLHVGLDVQNDLSCMIQADGILMGCSTFGQMAGVLGKGIKFFSFECSGKKTPNHYKMMPTLAVAEKGYMWVPISGSWHNPAIASRPIFEAALENYGKEKQ 558
            M+ + + V   G ++P+FH+FSET LPCP  + G+F EFP W V  +++ EC +A  P+ CPEK AG   C P  +GIFRV G+ +  +VG +V   L  MI AD ++MGCS FGQ+AG+L KGIK FS  C G  T    KM P  A+AE G +WVP+ GSW +P + +  IF  A E Y + ++
Sbjct:    1 MKVIAKEVHGLGQRTPLFHIFSETELPCPSLEDGVFPEFPEWAVAPDEIRECHSARPPDDCPEKQAGGDFCYPHHTGIFRVPGEPIIFNVGGNVVQSLMSMISADAVVMGCSAFGQLAGILSKGIKLFSTGCEGNMTWEQNKMAPLFAIAELGELWVPLEGSWADPTLTNVGIFRKAFELYVEREE 186          
BLAST of mRNA_H-elongata_contig50067.12229.1 vs. uniprot
Match: A0A6H5JJ94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ94_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.130e-27
Identity = 58/133 (43.61%), Postives = 78/133 (58.65%), Query Frame = 0
Query:  419 NQVTECLTAMTPETCPEKLAGAPECNPDRSGIFRVAGKDLYLHVGLDVQNDLSCMIQADGILMGCSTFGQMAGVLGKGIKFFSFECSGKKTPNHYKMMPTLAVAEKGYMWVPISGSWHNPAIASRPIFEAALE 551
            +Q+ ECL A TP+ CPEK AG   C P R+GIFR+  K + LH+G DVQN++SC+I+ADG+LM                                + +P L +AEKG++WVPI GSWH+P  +SR IF AAL+
Sbjct:   20 DQIEECLAATTPQDCPEKQAGT-FCTPKRAGIFRIRYKSIVLHMGSDVQNEMSCIIEADGVLM--------------------------------RSIPPLTIAEKGHLWVPIEGSWHDPVWSSRSIFSAALD 119          
BLAST of mRNA_H-elongata_contig50067.12229.1 vs. uniprot
Match: D7G5J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J9_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 6.190e-21
Identity = 56/159 (35.22%), Postives = 85/159 (53.46%), Query Frame = 0
Query:   84 ACGDFHSEDRGVSGWLSSDCRAIWTAWTMTLEDRNFVPNQIRDNFNETSLQLRQEGRPCVVRSRSYEDGAGSASVRNLATWMVAEEMGCDWAAPTLSSERIDDK-GT-LMYCHKTVTVNQLHATAAEDFMGNIDPANFPDRIF---RCEVVNWLEYFRF 237
            AC DF       SGW   DC  +W  +  T+ ++        D + +T+ +LR+ G PC+V S    DGAGS ++R+LATW+ + EMGCDW  P    + +  + GT +MYCH+         TAAE     +DP+   + +    RC +++WL YF+F
Sbjct:  103 ACADFAPGQYTGSGWTPEDCLHVWNDFNDTVWEQFHPRMPDADLWIDTAEELRRAGSPCLVGSIPNGDGAGSTTIRHLATWIFSREMGCDWVTPDWGKKFVGGRSGTAVMYCHRA-------GTAAE-----MDPSKTKEELKAMRRCVIIDWLSYFQF 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50067.12229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JW68_9PHAE2.930e-10154.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT1_ECTSI1.830e-8140.29Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
D7G5J8_ECTSI4.230e-7557.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L814_9PHAE1.630e-5647.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXM8_9PHAE2.360e-5045.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ94_9PHAE2.130e-2743.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5J9_ECTSI6.190e-2135.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..573
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50067contigH-elongata_contig50067:1001..3506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50067.12229.1mRNA_H-elongata_contig50067.12229.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50067 150..4006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50067.12229.1 ID=prot_H-elongata_contig50067.12229.1|Name=mRNA_H-elongata_contig50067.12229.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=574bp
MCRIINALRPLVPLQPFVWQCDIRKAVCSGKMEIVSLVALSKRILLFSLW
VFASSASRGLRRKSSPIKGSMGKDIVRSPYAEQACGDFHSEDRGVSGWLS
SDCRAIWTAWTMTLEDRNFVPNQIRDNFNETSLQLRQEGRPCVVRSRSYE
DGAGSASVRNLATWMVAEEMGCDWAAPTLSSERIDDKGTLMYCHKTVTVN
QLHATAAEDFMGNIDPANFPDRIFRCEVVNWLEYFRFREHGITHIMGGKT
KRILLNVKDSNAVLQARREYNSSPEGVRPWDNLHFFIGKIAANQFVQNVP
SWDAVKRERIAGVVKKFRESFHEFPRPSYDHAPKCSYSQDHGVLDIALHV
RLGDRKNYFHDNGLGHFEHLEAFMETVTEAVLAHGYQSPMFHVFSETSLP
CPDDRGIFSEFPIWPVEINQVTECLTAMTPETCPEKLAGAPECNPDRSGI
FRVAGKDLYLHVGLDVQNDLSCMIQADGILMGCSTFGQMAGVLGKGIKFF
SFECSGKKTPNHYKMMPTLAVAEKGYMWVPISGSWHNPAIASRPIFEAAL
ENYGKEKQGIPYLSRPWPSQPQQ*
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