prot_H-elongata_contig49774.12190.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49774.12190.1
Unique Nameprot_H-elongata_contig49774.12190.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: D8LLA6_ECTSI (Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLA6_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 6.600e-36
Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            ML+ +A QEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEG++ADRNLCLGDLIGVIKTFF+KIGI Q
Sbjct:  343 MLHRIANQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGMIADRNLCLGDLIGVIKTFFHKIGITQ 411          
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: A0A7S3LAA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LAA3_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.040e-33
Identity = 58/69 (84.06%), Postives = 60/69 (86.96%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            MLY LA Q GGFTP RYFSIDRVFRNETMDATHLCEFHQVEGLVAD +L LGDLIG I+TFF KIGI Q
Sbjct:   28 MLYKLANQPGGFTPARYFSIDRVFRNETMDATHLCEFHQVEGLVADYDLSLGDLIGTIETFFNKIGITQ 96          
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: A0A7S1FLS1_9STRA (Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FLS1_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.070e-33
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            MLY LA QEGGF P+RYFSIDRVFRNETMDATHLCEFHQVEGLVAD NL LGDLIG I+TFF KIGI Q
Sbjct:  120 MLYKLANQEGGFKPQRYFSIDRVFRNETMDATHLCEFHQVEGLVADYNLSLGDLIGTIETFFNKIGITQ 188          
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: W7T7M1_9STRA (Phenylalanyl-trna synthetase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7M1_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.200e-33
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            MLY LA Q GGF+P++YFSIDRVFRNE+MDATHLCEFHQVEGLVADRNL LGDLIG IKTFF +IGI  
Sbjct:    1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITD 69          
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: A0A812V904_SYMMI (Phenylalanine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V904_SYMMI)

HSP 1 Score: 123 bits (309), Expect = 4.140e-33
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            ML+ LA QEGGFTP++YFSIDRVFRNETMDATHLCEFHQVEGLVADRNL LG LIG I+TFF KIGI Q
Sbjct:  121 MLHRLANQEGGFTPQKYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLTLGHLIGTIRTFFEKIGITQ 189          
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: A0A7S2Y5I1_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y5I1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 9.840e-33
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            MLY LA QEGGF P+RYFSIDRVFRNETMDATHLCEFHQVEGLVAD +L LGDLIG I+TFF KIGI Q
Sbjct:   77 MLYKLANQEGGFQPQRYFSIDRVFRNETMDATHLCEFHQVEGLVADYDLSLGDLIGTIETFFKKIGITQ 145          
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: A0A6V2DUX8_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2DUX8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.780e-32
Identity = 60/69 (86.96%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            MLY LA QEGGFTP+RYFSIDRVFRNETMDATHLCEFHQVEGLVAD NL LGDLIG I+TFF KIGI Q
Sbjct:  340 MLYKLANQEGGFTPQRYFSIDRVFRNETMDATHLCEFHQVEGLVADYNLSLGDLIGTIETFFKKIGITQ 408          
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: A0A7S2XV42_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2XV42_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.630e-32
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            MLY LA Q+GGFTP+RYFSIDRVFRNETMDATHLCEFHQVEG+VAD +L LGDLIG I+TFF KIGI Q
Sbjct:  169 MLYKLANQKGGFTPQRYFSIDRVFRNETMDATHLCEFHQVEGMVADYDLSLGDLIGTIETFFNKIGITQ 237          
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: A0A835YKG3_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG3_9STRA)

HSP 1 Score: 124 bits (310), Expect = 8.990e-32
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            MLY LA QEGGF PKRYFSIDRVFRNE+MDATHLCEFHQVEGLVADRNL LGDLIG IK FF +IGI Q
Sbjct:  340 MLYKLANQEGGFQPKRYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLSLGDLIGTIKFFFERIGITQ 408          
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Match: A0A7S4J9R1_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J9R1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.760e-31
Identity = 58/69 (84.06%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLCLGDLIGVIKTFFYKIGIKQ 69
            MLY LA QEGGFTP+RYFSIDRVFRNETMDATHLCEFHQVEGLVAD +L LGDLIG I+TFF KIGI++
Sbjct:  340 MLYKLANQEGGFTPQRYFSIDRVFRNETMDATHLCEFHQVEGLVADYDLSLGDLIGTIETFFKKIGIEK 408          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49774.12190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLA6_ECTSI6.600e-3688.41Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxI... [more]
A0A7S3LAA3_9STRA1.040e-3384.06Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S1FLS1_9STRA2.070e-3385.51Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Core... [more]
W7T7M1_9STRA2.200e-3381.16Phenylalanyl-trna synthetase n=1 Tax=Nannochlorops... [more]
A0A812V904_SYMMI4.140e-3384.06Phenylalanine--tRNA ligase n=1 Tax=Symbiodinium mi... [more]
A0A7S2Y5I1_9STRA9.840e-3384.06Phenylalanine--tRNA ligase n=1 Tax=Amphiprora palu... [more]
A0A6V2DUX8_9STRA1.780e-3286.96Phenylalanine--tRNA ligase n=1 Tax=Ditylum brightw... [more]
A0A7S2XV42_9STRA6.630e-3282.61Phenylalanine--tRNA ligase n=2 Tax=Bacillariophyta... [more]
A0A835YKG3_9STRA8.990e-3285.51Phenylalanine--tRNA ligase n=2 Tax=Tribonema minus... [more]
A0A7S4J9R1_9STRA1.760e-3184.06Phenylalanine--tRNA ligase n=2 Tax=Odontella aurit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..70
e-value: 3.0E-22
score: 81.5
NoneNo IPR availablePANTHERPTHR11538:SF40PHENYLALANINE--TRNA LIGASE ALPHA SUBUNITcoord: 1..69
NoneNo IPR availablePANTHERPTHR11538PHENYLALANYL-TRNA SYNTHETASEcoord: 1..69
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 9..68
IPR002319Phenylalanyl-tRNA synthetasePFAMPF01409tRNA-synt_2dcoord: 12..68
e-value: 1.9E-19
score: 70.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49774contigH-elongata_contig49774:115..804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49774.12190.1mRNA_H-elongata_contig49774.12190.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49774 106..804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49774.12190.1 ID=prot_H-elongata_contig49774.12190.1|Name=mRNA_H-elongata_contig49774.12190.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
MLYHLAKQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGLVADRNLC
LGDLIGVIKTFFYKIGIKQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002319Phenylalanyl-tRNA_Synthase