prot_H-elongata_contig49679.12173.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49679.12173.1
Unique Nameprot_H-elongata_contig49679.12173.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: A0A7S2FWS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWS9_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 9.970e-10
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    3 DGSNRVNDFYEFNIATGFWSHVRALGTSPSPRDRHTGVVHGNSFFVLAG 51
            DG+NRVNDFYEF+  T  W     +G  P+PRDRH+ V + NSF+V AG
Sbjct:    1 DGTNRVNDFYEFDFKTREWMTRAPVGQLPTPRDRHSSVCYANSFYVFAG 49          
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: A0A7S4A3I8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3I8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.240e-9
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 GYDGSNRVNDFYEFNIATGFWSHVR-ALGTSPSPRDRHTGVVHGNSFFVLAG 51
            GYDGS+RVND +EF+     WS VR + GT PSPRDRH  VV G SF+V AG
Sbjct:   73 GYDGSHRVNDCWEFDFGKRAWSTVRPSSGTPPSPRDRHVAVVWGGSFYVFAG 124          
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: F0Y4D1_AURAN (BTB domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4D1_AURAN)

HSP 1 Score: 63.5 bits (153), Expect = 1.370e-8
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 GYDGSNRVNDFYEFNIATGFWSHV-RALGTSPSPRDRHTGVVHGNSFFVLAG 51
            GYDGSNRVND +EF+     WS V  A G+ P+PRDRH  VV G+SF+V AG
Sbjct:   33 GYDGSNRVNDCWEFDFGKRSWSLVVPASGSPPTPRDRHVAVVWGSSFYVFAG 84          
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: A0A7S1V2Y6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V2Y6_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 5.040e-8
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    1 GYDGSNRVNDFYEFNIATGFWSHVRALGTS---PSPRDRHTGVVHGNSFFVLAG 51
            GY G  RVNDF+ ++ A   WS V     S   PSPRDRHTGVV+GNSF+V  G
Sbjct:  207 GYSGQTRVNDFHAYSFAEKRWSPVLPSANSGRPPSPRDRHTGVVYGNSFYVYGG 260          
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: A0A7S1XQV5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQV5_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 6.880e-8
Identity = 28/52 (53.85%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    1 GYDGSNRVNDFYEFNIATGFWSHVRAL-GTSPSPRDRHTGVVHGNSFFVLAG 51
            GYDG  RVND YEF++    W    A  G  PSPRDRH GVVHG+  +V  G
Sbjct:   76 GYDGFGRVNDLYEFHLRDQIWRETPATNGIPPSPRDRHIGVVHGSCMYVFGG 127          
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: A0A4D9CMR4_9STRA (BTB domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMR4_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.180e-7
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 GYDGSNRVNDFYEFNIATGFWSHVRAL-GTSPSPRDRHTGVVHGNSFFVLAG 51
            G+DGS RVNDFY F++ T  W  V  L G++P+PR  HTGVV+ + F+VL G
Sbjct:  297 GFDGSQRVNDFYGFSLDTREWRPVVCLTGSAPTPRHSHTGVVYKDKFYVLTG 348          
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: A0A078ALD4_STYLE (Amp-dependent synthetase and ligase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078ALD4_STYLE)

HSP 1 Score: 57.4 bits (137), Expect = 2.120e-6
Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    1 GYDGSNRVNDFYEFNIATGFWSHVRALGTS--PSPRDRHTGVVHGNSFFVLAG 51
            GYDG NRVNDFYE+N+    W  V   G+S  P+PR  H+ VV+ +S +V  G
Sbjct:   61 GYDGFNRVNDFYEYNVDYNTWQEVLCSGSSSPPTPRHSHSAVVYEDSMYVFGG 113          
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: A0A813EXI4_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EXI4_POLGL)

HSP 1 Score: 56.6 bits (135), Expect = 2.760e-6
Identity = 24/42 (57.14%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    1 GYDGSNRVNDFYEFNIATGFWSHVRALGTSPSPRDRHTGVVH 42
            GYDGSNRVNDF++F+     WS +   G SPS RDRH  V H
Sbjct:   14 GYDGSNRVNDFFKFSFKASKWSQLNVAGASPSARDRHVVVNH 55          
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: D8LIL3_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL3_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 2.070e-5
Identity = 131/167 (78.44%), Postives = 134/167 (80.24%), Query Frame = 0
Query:    1 GYDGSNRVNDFYEFNIATGFWSHVRALGTSPSPRDRHTGVVHGNSFFVLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNAAGRVPRARYRATXXXXXXXXXXXXXXXXTRHLNDVHVFDFE 167
            GYDGSNRVNDFYEF I+TG WS V+A GT                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VNAAGRVPRA     XXXXXXXXXXXXXXXXTRHLNDVHVFDF+
Sbjct:   39 GYDGSNRVNDFYEFKISTGSWSKVQASGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQVNAAGRVPRAXXXXXXXXXXXXXXXXXXXXXTRHLNDVHVFDFD 205          
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Match: A0A3R7Y188_9STRA (BTB domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7Y188_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.800e-5
Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 0
Query:    1 GYDGSNRVNDFYEFNIATGFWSHVRALGTSPSP 33
            GYDGSNRVNDF+E+N     WS V ALGT P+P
Sbjct:  142 GYDGSNRVNDFFEYNFKRKVWSQVMALGTPPTP 174          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49679.12173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A7S2FWS9_9STRA9.970e-1055.10Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4A3I8_9STRA2.240e-961.54Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y4D1_AURAN1.370e-859.62BTB domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S1V2Y6_9STRA5.040e-855.56Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1XQV5_9STRA6.880e-853.85Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A4D9CMR4_9STRA3.180e-753.85BTB domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A078ALD4_STYLE2.120e-649.06Amp-dependent synthetase and ligase n=1 Tax=Stylon... [more]
A0A813EXI4_POLGL2.760e-657.14Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
D8LIL3_ECTSI2.070e-578.44BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A3R7Y188_9STRA3.800e-566.67BTB domain-containing protein n=4 Tax=Aphanomyces ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13415Kelch_3coord: 43..92
e-value: 1.1E-9
score: 38.4
NoneNo IPR availablePANTHERPTHR46376FAMILY NOT NAMEDcoord: 1..167
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 133..167
e-value: 1.4E-8
score: 34.1
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 1..78
e-value: 4.8E-15
score: 57.3
coord: 79..168
e-value: 7.5E-22
score: 79.7
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 1..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49679contigH-elongata_contig49679:375..1324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49679.12173.1mRNA_H-elongata_contig49679.12173.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49679 375..1324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49679.12173.1 ID=prot_H-elongata_contig49679.12173.1|Name=mRNA_H-elongata_contig49679.12173.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
GYDGSNRVNDFYEFNIATGFWSHVRALGTSPSPRDRHTGVVHGNSFFVLA
GFDGNQRVNDFFEFNFDTMQWTPVLALSGAPPSPRHSHASVVHGNSMFVF
GGYDGSYRSDFHEFNFGCNSWLPVNAAGRVPRARYRATCVVHSGCMYLFG
GHDGTRHLNDVHVFDFEVVIIIISYYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR015915Kelch-typ_b-propeller