prot_H-elongata_contig49631.12164.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49631.12164.1
Unique Nameprot_H-elongata_contig49631.12164.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
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BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: D7G096_ECTSI (Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G096_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 1.440e-63
Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0 
Query:    1 MLSMSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            MLSMSPSKRRDTDMMKLMMSDFEV+IPDESSMHDFLVAFPGP DTPY+GGVWKVHVTLPKEYPFKSPSIGFENR+FHPNVDEMSGSVCLDVINQTWSPMF
Sbjct:    1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMF 100
[Close]
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: A0A835Z4W6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W6_9STRA)

HSP 1 Score: 183 bits (465), Expect = 8.200e-57
Identity = 83/96 (86.46%), Postives = 92/96 (95.83%), Query Frame = 0 
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            SP+KRRD DMMKLMMSDF V+IPDE SMHDF+VAFPGP +TPYEGGVWKVHV+LP+EYP++SPSIGFENRI+HPNVDEMSGSVCLDVINQTWSPMF
Sbjct:    3 SPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMF 98
[Close]
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: A0A7S2AI11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI11_9STRA)

HSP 1 Score: 172 bits (436), Expect = 8.850e-54
Identity = 79/96 (82.29%), Postives = 87/96 (90.62%), Query Frame = 0 
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            +P+KRR  DMMKLMMSD+EV IPDESSMHDF V F GP DTPYEGGVWK+HVTLP  YPFKSPSIGF+NR+FHPNVD++SGSVCLDVINQTWSPMF
Sbjct:    6 TPNKRRHQDMMKLMMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMF 101
[Close]
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: A0A7S2AI60_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI60_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.270e-52
Identity = 79/96 (82.29%), Postives = 87/96 (90.62%), Query Frame = 0 
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            +P+KRR  DMMKLMMSD+EV IPDESSMHDF V F GP DTPYEGGVWK+HVTLP  YPFKSPSIGF+NR+FHPNVD++SGSVCLDVINQTWSPMF
Sbjct:    6 TPNKRRHQDMMKLMMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMF 101
[Close]
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: A0A7S2BA17_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA17_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.860e-49
Identity = 75/96 (78.12%), Postives = 85/96 (88.54%), Query Frame = 0 
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            +P+KRR  DMMKLMMSD+EV IPDES MHDF V F GP +TPYE G WK+HVTLP +YPFKSPSIGF+NR+FHPNVD++SGSVCLDVINQTWSPMF
Sbjct:   65 NPNKRRHQDMMKLMMSDYEVLIPDESCMHDFFVKFDGPAETPYENGSWKIHVTLPADYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMF 160
[Close]
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: A0A7S3XS74_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS74_HETAK)

HSP 1 Score: 167 bits (422), Expect = 2.140e-49
Identity = 77/99 (77.78%), Postives = 87/99 (87.88%), Query Frame = 0 
Query:    2 LSMSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            LS SPSKRRD D+++LMMSD+EV +PDE  ++DF VAF GP  TPYEGGVW VHVTLP EYP+KSPSIGF NR+FHPNVD+MSGSVCLDVINQTWSPMF
Sbjct:   80 LSSSPSKRRDNDLVRLMMSDYEVTLPDEDKIYDFHVAFHGPEKTPYEGGVWDVHVTLPPEYPYKSPSIGFSNRLFHPNVDDMSGSVCLDVINQTWSPMF 178
[Close]
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: A0A8K1C4X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4X5_PYTOL)

HSP 1 Score: 162 bits (409), Expect = 5.510e-49
Identity = 74/96 (77.08%), Postives = 86/96 (89.58%), Query Frame = 0 
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            S +KRR+TD+MKLMMSD+EV + DE+  +DF V F GP +TPYEGGVWK+HV+LPKEYPFKSPSIGF NRI+HPNVD+MSGSVCLDVINQTWSPMF
Sbjct:    3 SMNKRRETDVMKLMMSDYEVQLTDETKTNDFHVKFHGPAETPYEGGVWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMF 98
[Close]
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: A0A7S2W0L0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L0_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.610e-48
Identity = 73/94 (77.66%), Postives = 85/94 (90.43%), Query Frame = 0 
Query:    7 SKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            SKR   DMMKLMMSD+EV+IP+E S+H+F V F GP +TPYEGGVWKVHV LP++YPFKSPSIGF+NRI+HPNVD++SGSVCLDVINQTWSPMF
Sbjct:   20 SKRMHRDMMKLMMSDYEVHIPNEQSVHEFFVKFHGPAETPYEGGVWKVHVMLPRDYPFKSPSIGFKNRIYHPNVDDLSGSVCLDVINQTWSPMF 113
[Close]
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: M2Y2Q8_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2Q8_GALSU)

HSP 1 Score: 161 bits (407), Expect = 2.930e-48
Identity = 74/96 (77.08%), Postives = 85/96 (88.54%), Query Frame = 0 
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            SPSKRR+TD+MKLMM+++EV + +   + DF V F GPVDTPYEGGVWKVHVTLP+ YP+KSPSIGF NRI+HPNVDEMSGSVCLDVINQTWSPMF
Sbjct:    3 SPSKRRETDLMKLMMAEYEVELAENDRVGDFFVKFCGPVDTPYEGGVWKVHVTLPEAYPYKSPSIGFVNRIYHPNVDEMSGSVCLDVINQTWSPMF 98
[Close]
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Match: A0A2D4C6N9_PYTIN (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6N9_PYTIN)

HSP 1 Score: 160 bits (404), Expect = 3.080e-48
Identity = 73/97 (75.26%), Postives = 87/97 (89.69%), Query Frame = 0 
Query:    4 MSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGVWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF 100
            MS +KRR+ D+MKLMMS+++V++ DES  +DF V F GP DTPYEGG+WK+HV+LPKEYPFKSPSIGF NRI+HPNVD+MSGSVCLDVINQTWSPMF
Sbjct:    1 MSSNKRREKDVMKLMMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMF 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49631.12164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G096_ECTSI1.440e-6396.00Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectoc... [more]
A0A835Z4W6_9STRA8.200e-5786.46Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S2AI11_9STRA8.850e-5482.29Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2AI60_9STRA1.270e-5282.29Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2BA17_9STRA1.860e-4978.13Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3XS74_HETAK2.140e-4977.78Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A8K1C4X5_PYTOL5.510e-4977.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2W0L0_9STRA1.610e-4877.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
M2Y2Q8_GALSU2.930e-4877.08Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
A0A2D4C6N9_PYTIN3.080e-4875.26Ubiquitin-conjugating enzyme E2, putative n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 6..99
e-value: 2.2E-6
score: 37.2
NoneNo IPR availablePANTHERPTHR24068:SF288coord: 4..100
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 4..100
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 5..100
e-value: 1.1E-34
score: 121.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 8..99
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 13..99
e-value: 8.7E-27
score: 93.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 28..100
score: 25.648
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 76..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49631contigH-elongata_contig49631:72..1408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49631.12164.1mRNA_H-elongata_contig49631.12164.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49631 72..1408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49631.12164.1 ID=prot_H-elongata_contig49631.12164.1|Name=mRNA_H-elongata_contig49631.12164.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
MLSMSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGG
VWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS