prot_H-elongata_contig49606.12161.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49606.12161.1
Unique Nameprot_H-elongata_contig49606.12161.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length39
Homology
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BLAST of mRNA_H-elongata_contig49606.12161.1 vs. uniprot
Match: D7G359_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G359_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.970e-7
Identity = 24/38 (63.16%), Postives = 33/38 (86.84%), Query Frame = 0 
Query:    1 LVLLLDEPLEKLPIEACSGLNGMQAVARDFSLNILRHR 38
            LVLL+DE LEKLP+EAC+ + G+ +V+RDFSL++L HR
Sbjct: 2953 LVLLMDEKLEKLPVEACAAVGGISSVSRDFSLHMLCHR 2990
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49606.12161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G359_ECTSI1.970e-763.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49606contigH-elongata_contig49606:2066..2182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49606.12161.1mRNA_H-elongata_contig49606.12161.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49606 2066..2182 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49606.12161.1 ID=prot_H-elongata_contig49606.12161.1|Name=mRNA_H-elongata_contig49606.12161.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=39bp
LVLLLDEPLEKLPIEACSGLNGMQAVARDFSLNILRHR*
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