prot_H-elongata_contig49590.12158.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49590.12158.1
Unique Nameprot_H-elongata_contig49590.12158.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: D8LFP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP2_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.280e-25
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISYL 58
            MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQ VFFG LGD S+N+ISYL
Sbjct:  944 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQVVFFGPLGDNSSNLISYL 1001          
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: A0A6H5K7U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U8_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.850e-24
Identity = 51/58 (87.93%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISYL 58
            MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQ VFFG LG+ S N+I YL
Sbjct:  248 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQVVFFGPLGENSTNLICYL 305          
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: D8LFN4_ECTSI (Pleiotropic drug resistance transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN4_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 2.870e-24
Identity = 51/58 (87.93%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISYL 58
            MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQ VFFG LG+ S N+I YL
Sbjct: 1032 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQVVFFGPLGENSTNLICYL 1089          
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: D7FQN0_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN0_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.760e-23
Identity = 50/58 (86.21%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISYL 58
            MRAIRKVAAT RAVICTIHQPSTYLFEMFD+LLLLKKGGQTVFFG LG +S+ +ISYL
Sbjct:  181 MRAIRKVAATGRAVICTIHQPSTYLFEMFDSLLLLKKGGQTVFFGELGAESSKLISYL 238          
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: A0A835ZIR5_9STRA (ABC-2 type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIR5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.950e-19
Identity = 42/58 (72.41%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISYL 58
            +RAIRKVA+T RAVICTIHQPSTYLFEMFD+LLLLKKGG+ V+FG LG  S+ +I+++
Sbjct:  889 LRAIRKVASTGRAVICTIHQPSTYLFEMFDSLLLLKKGGEVVYFGELGVHSSALIAHI 946          
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: A0A835Z0F1_9STRA (ABC-2 type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.960e-19
Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISYL 58
            +RAIRKVA T R ++CTIHQPSTYLFEMFD +LLLKKGG+TV+FG LG  S+ +IS+L
Sbjct:  963 VRAIRKVATTGRTIVCTIHQPSTYLFEMFDLMLLLKKGGETVYFGELGTHSSALISHL 1020          
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: A0A485KDB1_9STRA (Aste57867_4588 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDB1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.090e-17
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISY 57
            M  IRK+A+T R V+CTIHQPS  +FEMFD+LLLLK+GGQTVFFG LG ++AN+I Y
Sbjct:   35 MSGIRKIASTGRTVVCTIHQPSAEVFEMFDSLLLLKRGGQTVFFGDLGVRAANLIDY 91          
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: A0A1V9ZBF3_9STRA (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBF3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.220e-17
Identity = 38/57 (66.67%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISY 57
            M  IRK+A+T R V+CTIHQPST +FEMFD+LLLLK+GG+TVFFG LG Q++++I Y
Sbjct:  923 MTGIRKIASTGRTVVCTIHQPSTEVFEMFDSLLLLKRGGETVFFGDLGHQASHLIEY 979          
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: A0A485KFN2_9STRA (Aste57867_4589 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KFN2_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.220e-17
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISY 57
            M  IRK+A+T R V+CTIHQPS  +FEMFD+LLLLK+GGQTVFFG LG ++AN+I Y
Sbjct:  926 MSGIRKIASTGRTVVCTIHQPSAEVFEMFDSLLLLKRGGQTVFFGDLGVRAANLIDY 982          
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Match: A0A067CIH3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CIH3_SAPPC)

HSP 1 Score: 84.3 bits (207), Expect = 1.220e-17
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQSANIISY 57
            M  IRK+A+T R V+CTIHQPST +FEMFD+LLLLK+GG+TVFFG LG  + N+ISY
Sbjct:  928 MTGIRKIASTGRTVVCTIHQPSTEVFEMFDSLLLLKRGGETVFFGDLGANAINMISY 984          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49590.12158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFP2_ECTSI1.280e-2591.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7U8_9PHAE2.850e-2487.93ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LFN4_ECTSI2.870e-2487.93Pleiotropic drug resistance transporter n=1 Tax=Ec... [more]
D7FQN0_ECTSI1.760e-2386.21ABC transporter domain-containing protein n=1 Tax=... [more]
A0A835ZIR5_9STRA3.950e-1972.41ABC-2 type transporter-domain-containing protein n... [more]
A0A835Z0F1_9STRA3.960e-1970.69ABC-2 type transporter-domain-containing protein n... [more]
A0A485KDB1_9STRA1.090e-1768.42Aste57867_4588 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1V9ZBF3_9STRA1.220e-1766.67ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ach... [more]
A0A485KFN2_9STRA1.220e-1768.42Aste57867_4589 protein n=1 Tax=Aphanomyces stellat... [more]
A0A067CIH3_SAPPC1.220e-1768.42Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..57
e-value: 5.2E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 2..58
NoneNo IPR availablePANTHERPTHR19241:SF324ABC TRANSPORTER G FAMILY MEMBER 15coord: 2..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49590contigH-elongata_contig49590:2186..2359 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49590.12158.1mRNA_H-elongata_contig49590.12158.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49590 2186..2368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49590.12158.1 ID=prot_H-elongata_contig49590.12158.1|Name=mRNA_H-elongata_contig49590.12158.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
MRAIRKVAATQRAVICTIHQPSTYLFEMFDALLLLKKGGQTVFFGSLGDQ
SANIISYL
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