prot_H-elongata_contig49498.12138.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49498.12138.1
Unique Nameprot_H-elongata_contig49498.12138.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length430
Homology
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: D8LC52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC52_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 5.500e-79
Identity = 209/446 (46.86%), Postives = 253/446 (56.73%), Query Frame = 0
Query:    3 QVSALTATSGSVCLLLMVFSGTILVCIAVVTLGICGMCYSIRQRGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLPLGESALAGALMVAAPSTVGDG-----RGSDRLG---AEGSENLLGGRSGRVASREADPDRDDEERASP-LGQLVWNPLPLLDAPETLPLHESDAARDARQMLSTQGVGVGEGNDPDADDTFAVDRADEEGEEGNPDGKENRDEAEEGKEPRAAVRDRDGVDDEVGHNGGVGGSDRCQPWAGS--PLHSSRSLSPQNDRPDESARASTEANRAHVSAQHHSRGASSASPDSRVMCGKAD-------NPGGNVDGSSARRGPIGVGLMPSAERIVASILQSRVDKALRSAWNLVDERRVRQAALGSGVALAAHVAFSERARRQ 430
            Q S+L   SG +CL++ VFSG+ LV +AV+ +G+CGMCYS+RQRGAL+ LP G+ ELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLS++ET+ VL SLPEDMQ  LTRPG+MHTLPRP Q LLLP   +A AG L+ A       G     RG +  G   A G+                   RD EE  +P LGQLVWNPLP     ET    E +   +       + +    G     D + +VD  +E G   +         A++G   R    D DG DD            R +PW     P H+SRSLSP   R     RA+T+   A       SR  SSA P      G A        N  GN  G +A       G++PSAER+VASILQ RVD A+R+AWN VDE+ VR+AALGSG+ALAAHVAFSERARRQ
Sbjct:  100 QFSSLAVASGGMCLVVSVFSGSALVFLAVIAIGVCGMCYSVRQRGALEYLPSGVTELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSEDETQGVLASLPEDMQYTLTRPGIMHTLPRPFQDLLLP--PNARAGVLIGAPDGREVIGPRRRHRGVETQGLAEAGGAXXXXXXXXXXXXXXXXXXHRDGEEGGAPVLGQLVWNPLPASLGQETTNGEEQEGEGEEHVFPQEEELDRAGG-----DASSSVDSEEERGRSASR-------HADDGGRARRNGVDDDGRDDNA---------TRRRPWEAEAYPPHASRSLSPAAVR----NRAATDV--AEADGARSSRRVSSALPIPARRLGTAGWFGRTHANGSGNPPGPAATTAG---GMVPSAERLVASILQRRVDGAVRTAWNAVDEQGVRRAALGSGIALAAHVAFSERARRQ 513          
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: A0A1V9YKG7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKG7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.260e-14
Identity = 51/126 (40.48%), Postives = 77/126 (61.11%), Query Frame = 0
Query:   21 FSGTILVCIAVVTLGICGMCYS------------IRQRGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLPLGESALA 134
            F+  IL+ + +   G  G+CY+            + +RG +  LP G+  LL RTTLLE+LTDTS F++++ YL F+M LS  E +RV+ SLP + Q ML +PGL++ LP  +Q  LLP  + A++
Sbjct:  133 FTRRILIALVLFGYGAWGLCYAWTVPLWRWYMYDMCERGLIAHLPEGLQTLLLRTTLLEWLTDTSFFESMQKYLPFLMPLSAPEQQRVVRSLPSESQAMLVKPGLINLLPDVVQDALLPSDKQAVS 258          
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: A0A7S1XZ18_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ18_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 9.340e-14
Identity = 41/93 (44.09%), Postives = 65/93 (69.89%), Query Frame = 0
Query:   35 GICGMCYSIRQRGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLP 127
            G  GM   +RQRG L+ +P  +  ++  ++LLE+LTD S F+A++ Y +F++GL++EETE  L++LP ++Q  L RPG++H LP  +Q  LLP
Sbjct:   88 GAAGMVLHVRQRGLLELIPERVRTVMLTSSLLEWLTDFSFFNALRPYAIFLLGLNEEETEYALNALPVEVQTTLMRPGVVHLLPDSMQRALLP 180          
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: A0A485KX30_9STRA (Aste57867_13020 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KX30_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.100e-12
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   41 YSIRQRGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLP 127
            Y +RQ G +  LP G+ + L R TLLE+LTDTS  D ++ Y  F + L+  E +RV+ SLP D Q M+T+PGL++ L   LQ +LLP
Sbjct:  187 YDVRQYGLIAYLPAGLQDTLLRMTLLEWLTDTSFIDNLRQYFPFFLPLNANEQQRVVESLPNDTQAMMTKPGLIYMLSPSLQDMLLP 273          
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: A0A2D4CHS9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHS9_PYTIN)

HSP 1 Score: 75.9 bits (185), Expect = 4.990e-11
Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   46 RGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLP 127
            +G +  LP  +  LL RTTLLE+LTDT+  D ++ +L F++ LSK E  RVL  LP + Q MLTRPG++  LP  +Q +LLP
Sbjct:  416 KGLVTLLPESVQHLLLRTTLLEWLTDTTFMDKLRPFLPFLLPLSKAEQNRVLEQLPVETQLMLTRPGMVTLLPDGVQRVLLP 497          
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: A0A2D4BM40_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM40_PYTIN)

HSP 1 Score: 75.9 bits (185), Expect = 5.070e-11
Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   46 RGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLP 127
            +G +  LP  +  LL RTTLLE+LTDT+  D ++ +L F++ LSK E  RVL  LP + Q MLTRPG++  LP  +Q +LLP
Sbjct:  405 KGLVTLLPESVQHLLLRTTLLEWLTDTTFMDKLRPFLPFLLPLSKAEQNRVLEQLPVETQLMLTRPGMVTLLPDGVQRVLLP 486          
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: K3WUF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUF6_GLOUD)

HSP 1 Score: 72.0 bits (175), Expect = 6.460e-10
Identity = 38/87 (43.68%), Postives = 58/87 (66.67%), Query Frame = 0
Query:   46 RGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLPLGESA 132
            +G +  LP  + ELL RT+LLE++TDT++ D I+ +L F++ LS+ E  R+L  +P + Q +LTRPGL+  LP  +Q  LLP   S+
Sbjct:  204 KGLIAFLPESVQELLLRTSLLEWMTDTTMSDKIQPFLPFLLPLSRAEQTRLLERMPVENQLVLTRPGLLPLLPESVQKALLPSEPSS 290          
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: D0MXH0_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MXH0_PHYIT)

HSP 1 Score: 69.3 bits (168), Expect = 4.460e-9
Identity = 36/86 (41.86%), Postives = 56/86 (65.12%), Query Frame = 0
Query:   46 RGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLPLGES 131
            RG +  LP  + ELL RT+LLE+LTDTS  D +  +L F++ L++ E  +++  +P + Q M+T+PGL+  LP  +Q +LLP   S
Sbjct:  164 RGLVGFLPDSMQELLLRTSLLEWLTDTSFSDKVAPFLPFLLPLTRAEQMKLMEQMPPESQVMMTKPGLLPLLPDSVQNVLLPAAGS 249          
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: A0A5D6XP04_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP04_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.090e-8
Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = 0
Query:   45 QRGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLP 127
            ++G +  LP  + +LL RT+LLE+LTD+S+ + ++ +L F++ LS+ E  R+L  +P + Q  LTRPGL+  LP  +Q +LLP
Sbjct:  179 RKGLVAFLPAPLQQLLLRTSLLEWLTDSSMSERVQPFLPFLLPLSRAEQTRLLERMPVESQLTLTRPGLLPLLPESVQRVLLP 261          
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Match: F0WGE4_9STRA (Uncharacterized protein AlNc14C91G5676 n=2 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGE4_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.220e-6
Identity = 29/83 (34.94%), Postives = 55/83 (66.27%), Query Frame = 0
Query:   45 QRGALKCLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSLPEDMQQMLTRPGLMHTLPRPLQGLLLP 127
            ++G +  LP  +  LL R +L+E+L+D ++F+++K  + F++ L++ E + VL  LP+  Q+++ RPG+++  P  LQ  LLP
Sbjct:   29 KKGLIGYLPDSLQHLLLRCSLIEWLSDRTLFESMKALVPFVLPLTESEQKIVLRQLPKSTQRIMCRPGMINFFPTQLQKALLP 111          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49498.12138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LC52_ECTSI5.500e-7946.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9YKG7_9STRA1.260e-1440.48Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S1XZ18_9STRA9.340e-1444.09Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A485KX30_9STRA1.100e-1247.13Aste57867_13020 protein n=1 Tax=Aphanomyces stella... [more]
A0A2D4CHS9_PYTIN4.990e-1148.78Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2D4BM40_PYTIN5.070e-1148.78Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WUF6_GLOUD6.460e-1043.68Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0MXH0_PHYIT4.460e-941.86Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A5D6XP04_9STRA1.090e-842.17Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
F0WGE4_9STRA4.220e-634.94Uncharacterized protein AlNc14C91G5676 n=2 Tax=Alb... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..430
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..41
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49498contigH-elongata_contig49498:692..3926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49498.12138.1mRNA_H-elongata_contig49498.12138.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49498 692..3926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49498.12138.1 ID=prot_H-elongata_contig49498.12138.1|Name=mRNA_H-elongata_contig49498.12138.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=430bp
LTQVSALTATSGSVCLLLMVFSGTILVCIAVVTLGICGMCYSIRQRGALK
CLPRGIVELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSKEETERVLHSL
PEDMQQMLTRPGLMHTLPRPLQGLLLPLGESALAGALMVAAPSTVGDGRG
SDRLGAEGSENLLGGRSGRVASREADPDRDDEERASPLGQLVWNPLPLLD
APETLPLHESDAARDARQMLSTQGVGVGEGNDPDADDTFAVDRADEEGEE
GNPDGKENRDEAEEGKEPRAAVRDRDGVDDEVGHNGGVGGSDRCQPWAGS
PLHSSRSLSPQNDRPDESARASTEANRAHVSAQHHSRGASSASPDSRVMC
GKADNPGGNVDGSSARRGPIGVGLMPSAERIVASILQSRVDKALRSAWNL
VDERRVRQAALGSGVALAAHVAFSERARRQ
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