prot_H-elongata_contig49484.12137.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49484.12137.1
Unique Nameprot_H-elongata_contig49484.12137.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length197
Homology
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: D7FHC8_ECTSI (Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC8_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 5.800e-97
Identity = 157/196 (80.10%), Postives = 171/196 (87.24%), Query Frame = 0
Query:    3 AHLLLETLPMSFSSLEKAIKAYHQHMPATVGQPLLFTTLPVVEEVAAPVGIVSKGSSKDSRQLQPGGVALADVH-DDPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDPDVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAAFTCELKFQ 197
            AHLLLE LPMSFSSLEKA+KAYHQHMPAT GQPL+ ++LPVVEEVA P GIV+KG+ KD R    G  + A+V  DDPAEH+YKVPEL  LGRVFRSA PVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLR+VTVEVE SDPD+YEV  SV LPELKCGDTGHAYVVLK  EG+AA+PAAF+CELKFQ
Sbjct:  466 AHLLLEALPMSFSSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPTGIVAKGAGKDGRS---GSASAAEVAPDDPAEHVYKVPELERLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHAYVVLKLAEGNAAEPAAFSCELKFQ 658          
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: A0A836CC02_9STRA (Coatomer subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC02_9STRA)

HSP 1 Score: 178 bits (452), Expect = 2.220e-48
Identity = 107/211 (50.71%), Postives = 131/211 (62.09%), Query Frame = 0
Query:    3 AHLLLETLPMSFSSLEKAIKAYHQHMPATVGQ--PLLFTTLPVVEE-VAAPVGIVSKGSSKDSRQLQPGG-------------VALADVHDDPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDPDVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAAFTCELKFQ 197
            AHL+L+ LPMSF+SLE+A+  Y   M +   Q  PLLF+TLPVVEE V AP+   +KG+S  S+ L   G              A A    DP   +YK+PELA LGRVFRS  PV LTESETEYVVRCVKHI D +VVLDF++ NTI +QML   +     S+P++Y V  S+ LP LK   TGH YVVL      A +P  FTCEL F+
Sbjct:  597 AHLMLDGLPMSFASLERAVGLYALSMQSGTAQAQPLLFSTLPVVEEHVPAPL---TKGTSAASKPLAGAGGGFGGGDSRVAPTAASAPATADPTAELYKIPELAALGRVFRSTAPVPLTESETEYVVRCVKHIFDAHVVLDFSVHNTIADQMLTEAS-----SEPELYSVVGSIPLPTLKYDQTGHCYVVLSRATEVAIEPVTFTCELHFK 799          
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: A0A7S2G1B7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1B7_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.620e-46
Identity = 99/204 (48.53%), Postives = 126/204 (61.76%), Query Frame = 0
Query:    3 AHLLLETLPMSFSSLEKAIKAYHQHMPATVGQPLLFTTLPVVEEVAAPVGIVSKGSSKDSR-QLQPGGVAL-------ADVHD-DPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDPDVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAAFTCELKFQ 197
            A +LLE LPMSF+ LEKA+K Y  H     GQPL    LPVVEE  APV   +KG +  S   +  GG A        AD    D A  +Y +PEL  LGRVFRS  PVELTESETEYVV+CVKHI+DG+VVL F ++NTI EQ L  V+++VE S+P++Y+   S+   +L  G  G  +VVL     +    A+F CEL+F+
Sbjct:   28 AAMLLEPLPMSFAHLEKAVKLYAAHGGVEDGQPLSIDALPVVEEPVAPV---AKGDALSSNPSVAAGGAATTSSGGLSADAEVVDAAAAVYAIPELGELGRVFRSCAPVELTESETEYVVKCVKHILDGHVVLQFDVTNTIAEQQLVDVSMKVENSEPELYDEILSIKCDKLVYGVQGSCFVVLARNPEAPISHASFNCELEFR 228          
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: A0A7S2UA50_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA50_9STRA)

HSP 1 Score: 153 bits (387), Expect = 9.110e-42
Identity = 84/199 (42.21%), Postives = 124/199 (62.31%), Query Frame = 0
Query:    3 AHLLLETLPMSFSSLEKAIKAYHQHMPATVG-QPLLFTTLPVVEEVA----APVGIVSKGSSKDSRQLQPGGVALADVHDDPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDPDVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAAFTCELKF 196
            A+++LETLPM+F  LE++I+AY +   A    +PL  +TLP+VE+      A    V     +D+     G         DPA  IY++PELA+LGRVFRS+ PV LTE+ETEYVV+C+KHI   +VVL FT+ NTI++Q L +VTV V+G+D +++EV   +   ++  G+T + + VL     ++  P +F CEL F
Sbjct:   26 AYVMLETLPMTFDKLERSIQAYMKAPYAMESPEPLTLSTLPIVEDTVEDLKAAASAVGDDMEEDTVAALTGAAPEVKPKADPAAVIYEIPELASLGRVFRSSAPVPLTENETEYVVQCIKHIFAEHVVLQFTVQNTIDDQRLENVTVAVDGNDSELFEVSGEIAAEKIPYGETVNCFTVLDRNAEASLGPNSFACELHF 224          
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: A0A7S2S5Q9_9STRA (Coatomer subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5Q9_9STRA)

HSP 1 Score: 157 bits (396), Expect = 8.280e-41
Identity = 93/207 (44.93%), Postives = 119/207 (57.49%), Query Frame = 0
Query:    3 AHLLLETLPMSFSSLEKAIKAYHQHMPATVGQPLLFTTLPVVEEVAAPVGIVSKGSSKDSR---QLQPGGVALADVHD-------DPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDPDVYEVHQSVMLP--ELKCGDTGHAYVVLKPLEGSAADPAAFTCELKFQ 197
            A +L+E LPMSFS+L++A+K Y         QP+    LPVVE+   P    SK  ++         P   A             DPA  +Y VPELA LGRVFRS+ PVELTESETEYVVRCVKHIMD YVVL F ++NTI EQ L  VTV +EG++P++Y   +++ +P   L     G  +V L         PA F+CELKF+
Sbjct:  584 ASVLVEPLPMSFSALDRAVKLYASRGGTGDEQPMTLAALPVVEDTPVPAHASSKPGTQPGAVRTMATPASAASGGAXXXXXXXXXDPAAAVYAVPELAQLGRVFRSSAPVELTESETEYVVRCVKHIMDDYVVLQFDVTNTIAEQRLEEVTVGLEGNEPELYGDEEALSVPCATLVYSTPGSCFVALARNTEVPVVPAIFSCELKFR 790          
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: A0A7S1GPQ2_CYCTE (Coatomer subunit gamma n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPQ2_CYCTE)

HSP 1 Score: 150 bits (379), Expect = 1.090e-38
Identity = 84/198 (42.42%), Postives = 122/198 (61.62%), Query Frame = 0
Query:    3 AHLLLETLPMSFSSLEKAIKAYHQHMPATVG--QPLLFTTLPVVEEVAAPVGIVSKGSSKDSRQLQPGGVALADVHD--DPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDPDVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAAFTCELKF 196
            A++LL+ LPMSF  LE+++KAY    P T+   +P+   +LPVVE+ A  +     G         P G  L +     D A  +Y +PELA+LGR FRS++PV+LTESETEYVV+CVKHI   +VVL F + NTIEEQ L +VTV ++ S+ +V+ V   + +  +  G+T + + VL+    +   P+ FTCEL+F
Sbjct:  386 AYILLDALPMSFDKLERSLKAYVA-TPTTMSSSEPVTVDSLPVVEDTADEIARAMSGGDALELDTAPLGSVLEEKKAPVDAAAVVYDIPELASLGRAFRSSVPVQLTESETEYVVQCVKHIFANHVVLQFIVQNTIEEQRLDNVTVVIDDSESEVFNVSGEIAVDGITYGETKNCFTVLERNGEAPLSPSTFTCELRF 582          
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: A0A6U1MSQ3_9STRA (Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MSQ3_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.930e-37
Identity = 86/202 (42.57%), Postives = 117/202 (57.92%), Query Frame = 0
Query:    4 HLLLETLPMSFSSLEKAIKAYHQHMPATVGQPLLFTTLPVVEEVAAPVGIVSKG---------SSKDSRQLQPGGVALADVHDDPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDPDVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAAFTCELKF 196
            +LLLE LP+SF +LE++++AY  H   + GQPL  +TLPVVEE AAP                ++  S    PGG   A   +DPA  +Y++PELA+LGRVFRS  PV LTESETEYVV+CVKH+   + VL+F ++NTI +Q L+ + V+VE  + ++Y V +S+             YVVL            F CEL F
Sbjct:  593 YLLLEPLPLSFPALERSLRAYQSHPGGSAGQPLQLSTLPVVEEPAAPAPSAQTHKLGAPAPTTATAASXXAAPGG---APGGEDPAAALYQIPELADLGRVFRSTQPVWLTESETEYVVQCVKHVFQNHTVLEFKVNNTIPDQKLQDIKVQVEAQE-ELYSVERSIPAEVALYSQPASCYVVLARQADQEFVGCTFGCELHF 790          
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: A0A1Z5JGT2_FISSO (Coatomer subunit gamma n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGT2_FISSO)

HSP 1 Score: 144 bits (364), Expect = 1.680e-36
Identity = 79/196 (40.31%), Postives = 121/196 (61.73%), Query Frame = 0
Query:    3 AHLLLETLPMSFSSLEKAIKAYHQHMPATVG--QPLLFTTLPVVEEVAAPVGIVSKGSSKDSRQLQPGGVALADVHDDPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDPDVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAAFTCELKF 196
            A ++LE+LP+SF  LE+++K Y    P T+   +P++ + LPVVE+  A     ++    D          + +V D PA  +Y +PELA+LGR FRS+LPV LTESETEYVV+C+KH+   ++VL FT+ NTIE+Q L +VT+ V+ SD +++     +    +K G+T   + VL+        P++FTCEL+F
Sbjct:  606 AFVVLESLPISFDKLERSMKVY-MAAPDTMNNPEPIVISALPVVEDGPATSAATTETDDLDIAATVSVEETVKEVVD-PAAAVYAIPELAHLGRAFRSSLPVPLTESETEYVVQCIKHVFQQHIVLQFTVQNTIEDQRLDNVTLLVDDSDSEIFSASGEIACSGIKYGETKSCFTVLERNTEMPLSPSSFTCELRF 799          
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: A0A7S1C1K4_9STRA (Coatomer subunit gamma n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1K4_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.710e-35
Identity = 84/197 (42.64%), Postives = 114/197 (57.87%), Query Frame = 0
Query:    1 SSAHLLLETLPMSFSSLEKAIKAYHQHMPATVG-QPLLFTTLPVVEEVAAPVGIVSKGSSKDSRQLQPGGVALADVHDDPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDPDVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAAFTCELKF 196
            S+++LLLE LPMSF  L  +IK+Y     A    +P+  + LP+VE V  P+       +  S  L       A    DPA  +Y VP+L  LGRVFRS   V LTESETEYVV CVKHI + Y+VL F + NTI++Q L +VTV +E  +PDV+EV   +    +  G+T + +V+L+    +A  P  F CEL F
Sbjct:  595 SASYLLLEPLPMSFDQLSLSIKSYMAAPHALSSPEPMTLSALPIVETVQDPLVDSKTTGAGPSAPLDGENAKNAAEPADPAAAVYAVPDLNALGRVFRSTKTVALTESETEYVVSCVKHIYEEYIVLQFKVQNTIDDQRLENVTVCMEVDNPDVFEVTGEIPAESIGYGETKNCFVLLQRKPNAALCPLNFNCELHF 791          
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Match: F0Y6T5_AURAN (Coatomer subunit gamma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6T5_AURAN)

HSP 1 Score: 140 bits (354), Expect = 3.710e-35
Identity = 85/196 (43.37%), Postives = 119/196 (60.71%), Query Frame = 0
Query:    5 LLLETLPMSFSSLEKAIKAYHQHMPATVGQPLL-FTTLPVVEEVAAPVGIVSKGSSKDSRQLQPGGVALADVHDDPAEHIYKVPELANLGRVFRSALPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSDP-DVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAA-FTCELKFQ 197
            LL+E LP+ F+ L +++K +           +L F TLP VE+ + P  + +   S     + P G  L    DD A  +YK+PELA LG VFRS LP+ELTESETEYVV CVKH+MD ++VL+F I+NTI +Q+L   +V++E  +P + Y +  SV  P L CG T  +++VL+   GS    AA F  ELKF+
Sbjct:  619 LLVEPLPVPFTRLARSLKKFEMAQDQENADLVLNFETLPHVEDHSPPTQLQATAQSS----VCPNGALL----DDSAVELYKIPELAALGTVFRSTLPLELTESETEYVVSCVKHVMDEHIVLEFAITNTIADQLLVDTSVKLEPVEPIETYSIVSSVGAPSLHCGATARSWIVLRCCPGSRMGAAAHFMAELKFR 806          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49484.12137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHC8_ECTSI5.800e-9780.10Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CC02_9STRA2.220e-4850.71Coatomer subunit gamma n=1 Tax=Tribonema minus Tax... [more]
A0A7S2G1B7_9STRA3.620e-4648.53Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UA50_9STRA9.110e-4242.21Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2S5Q9_9STRA8.280e-4144.93Coatomer subunit gamma n=1 Tax=Rhizochromulina mar... [more]
A0A7S1GPQ2_CYCTE1.090e-3842.42Coatomer subunit gamma n=1 Tax=Cyclophora tenuis T... [more]
A0A6U1MSQ3_9STRA1.930e-3742.57Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica... [more]
A0A1Z5JGT2_FISSO1.680e-3640.31Coatomer subunit gamma n=2 Tax=Fistulifera solaris... [more]
A0A7S1C1K4_9STRA2.710e-3542.64Coatomer subunit gamma n=2 Tax=Corethron hystrix T... [more]
F0Y6T5_AURAN3.710e-3543.37Coatomer subunit gamma n=1 Tax=Aureococcus anophag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037067Coatomer, gamma subunit, appendage domain superfamilyGENE3D2.60.40.1480coord: 73..197
e-value: 3.1E-33
score: 117.1
IPR013040Coatomer, gamma subunit, appendage, Ig-like subdomainPFAMPF08752COP-gamma_platfcoord: 80..197
e-value: 2.7E-35
score: 121.7
IPR017106Coatomer gamma subunitPANTHERPTHR10261COATOMER SUBUNIT GAMMAcoord: 4..196
IPR013041Clathrin adaptor, appendage, Ig-like subdomain superfamilySUPERFAMILY49348Clathrin adaptor appendage domaincoord: 79..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49484contigH-elongata_contig49484:253..3526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49484.12137.1mRNA_H-elongata_contig49484.12137.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49484 253..3526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49484.12137.1 ID=prot_H-elongata_contig49484.12137.1|Name=mRNA_H-elongata_contig49484.12137.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
SSAHLLLETLPMSFSSLEKAIKAYHQHMPATVGQPLLFTTLPVVEEVAAP
VGIVSKGSSKDSRQLQPGGVALADVHDDPAEHIYKVPELANLGRVFRSAL
PVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRSVTVEVEGSD
PDVYEVHQSVMLPELKCGDTGHAYVVLKPLEGSAADPAAFTCELKFQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037067Coatomer_gsu_app_sf
IPR013040Coatomer_gsu_app_Ig-like_dom
IPR017106Coatomer_gsu
IPR013041Clathrin_app_Ig-like_sf