prot_H-elongata_contig49478.12135.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49478.12135.1
Unique Nameprot_H-elongata_contig49478.12135.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length209
Homology
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: D7FKX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX7_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 1.630e-62
Identity = 124/188 (65.96%), Postives = 139/188 (73.94%), Query Frame = 0
Query:    1 MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVK-CHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLSLQETDNMSGYFAPSVSAVEDESPAAHATATAAGTGIEN 187
            MRGTEKYAHETQLSKRVGAWQ+KLEPLM SQEKRQAFDIH YG+SVL++VAS+L P +RARA  A K  H      +A         D + EP++ LV+FG VV G+ERFDVCRLFLASLQLANNGNVRLFHG NAADQ + PFRLELL+LQ +DNMSGYFAPS SA              AGTG EN
Sbjct:  654 MRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGQSVLSRVASVLTPAQRARAHTAAKGVHPKVADDAAASPEEAVQAD-TAEPDVPLVDFGTVVAGKERFDVCRLFLASLQLANNGNVRLFHGDNAADQETTPFRLELLTLQNSDNMSGYFAPSASA--------------AGTGPEN 826          
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: A0A6H5KBI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBI6_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 2.730e-62
Identity = 121/187 (64.71%), Postives = 138/187 (73.80%), Query Frame = 0
Query:    1 MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVKCHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLSLQETDNMSGYFAPSVSAVEDESPAAHATATAAGTGIEN 187
            MRGTEKYAHETQLSKRVGAWQ+KLEPLM SQEKRQAFDIH YG+SVL++VAS+L P +RARA  AVK  +     ++           + EP + LV+FG VV G+ERFDVCRLFLASLQLANNGNVRLFHG NAA+Q + PFRLELL+LQ +DNMSGYFAPS SA              AGTG EN
Sbjct:  525 MRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGQSVLSRVASVLTPAQRARAHTAVKGVQPKMADNSAGSPEEAVQADTAEPEVPLVDFGTVVAGKERFDVCRLFLASLQLANNGNVRLFHGDNAAEQETTPFRLELLTLQNSDNMSGYFAPSASA--------------AGTGPEN 697          
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: A0A836CG43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG43_9STRA)

HSP 1 Score: 126 bits (316), Expect = 6.650e-30
Identity = 74/158 (46.84%), Postives = 94/158 (59.49%), Query Frame = 0
Query:    7 YAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVKCHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLSLQETDNMSGYFAPSV 164
            YA ET LS+RVGAWQD+LEPL+R Q  R AFD+   G +VL    ++L    R R   A     DA       D++           + +V FG VV GRERFDVCR+FLASLQLAN+G V L H A A +QG +PF L++L       ++G+FAPSV
Sbjct:  653 YAQETGLSRRVGAWQDRLEPLLREQSARAAFDMRACGDAVLASAVAVLPRAARERLAAAA----DADAPPPTKDKAAA---------VDVVAFGRVVAGRERFDVCRMFLASLQLANSGCVALRHAATAREQGRVPFELQVLRAAAPQEVAGFFAPSV 797          
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: D0N0Q7_PHYIT (Condensin-2 complex subunit H2, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0Q7_PHYIT)

HSP 1 Score: 120 bits (300), Expect = 7.240e-28
Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 0
Query:    1 MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVKCHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLS 149
            M GTEKY  ET LSK+V  WQDKL PL++ Q+ R  FDIH YG+ ++ ++         AR  K  +  ++     A DD   +            V F  +V+G+ +F+VCRLFLASLQLAN+GNV LFH   AA+ G +PF++ELLS
Sbjct:  476 MSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHLYGREIIGRLEEEQKNSSLARHSKTTQRDKNKRIRLATDDEESE-----------TVPFETLVDGKSQFEVCRLFLASLQLANSGNVALFHARTAAEHGQVPFKMELLS 613          
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: A0A329RXK6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RXK6_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.180e-27
Identity = 65/149 (43.62%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    1 MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVKCHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLS 149
            M GTEKY  ET LSK+V  WQDKL PL++ Q+ R  FDIH YG+ ++ +       LE  +   ++  H    + +  D   R   + + +   S+V F  +V+G+ +F+VCRLFLASLQLANNGNV L H   AA+ G +PF ++LLS
Sbjct:  564 MSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHLYGREIIGR-------LEEEQKNASLAMHS---KTTKRDKNKRARLESASDEEESVVPFETLVDGKSQFEVCRLFLASLQLANNGNVALSHARTAAEHGQVPFEMQLLS 702          
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: H3GF21_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GF21_PHYRM)

HSP 1 Score: 119 bits (299), Expect = 1.320e-27
Identity = 68/150 (45.33%), Postives = 89/150 (59.33%), Query Frame = 0
Query:    1 MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVKCHEDAGRVS-AVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLS 149
            M GTEKY  ET LSK+V  WQ+KL PL++ Q+   AFDIH YG+ ++       D LE  +   ++  H  A R   A + R+R       E  +  V F  +V G+  F+VCRLFLASLQLANNGNV L H    AD G +PF+++LLS
Sbjct:  907 MSGTEKYVRETDLSKQVSDWQEKLTPLLKQQDAHPAFDIHHYGREII-------DRLEEEQKSTSLDKHSRATRKDKATNKRARLDPVPEDEEEIETVPFETLVGGKSPFEVCRLFLASLQLANNGNVALSHAHTTADHGKVPFKMQLLS 1049          
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: W2QP13_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QP13_PHYPN)

HSP 1 Score: 117 bits (292), Expect = 2.070e-27
Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    1 MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVKCHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLS 149
            M GTEKY  ET LSK+V  WQDKL PL++ Q+ R  FDIH+YG+ ++ +       LE  +   +++ H    +  A + R+R     ++E     V F  +V+G+ +F+VCRLFLASLQLAN+GNV L H   AA+ G +PF ++LLS
Sbjct:  269 MSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGR-------LEEEQKNSSLEKHTKTTK-KAQNKRARLA---TEEEETETVPFETLVDGKSQFEVCRLFLASLQLANSGNVALSHARTAAEHGQVPFEMQLLS 406          
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: W2PCM5_PHYPN (Uncharacterized protein (Fragment) n=13 Tax=Phytophthora TaxID=4783 RepID=W2PCM5_PHYPN)

HSP 1 Score: 117 bits (292), Expect = 1.030e-26
Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    1 MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVKCHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLS 149
            M GTEKY  ET LSK+V  WQDKL PL++ Q+ R  FDIH+YG+ ++ +       LE  +   +++ H    +  A + R+R     ++E     V F  +V+G+ +F+VCRLFLASLQLAN+GNV L H   AA+ G +PF ++LLS
Sbjct:  569 MSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGR-------LEEEQKNSSLEKHTKTTK-KAQNKRARLA---TEEEETETVPFETLVDGKSQFEVCRLFLASLQLANSGNVALSHARTAAEHGQVPFEMQLLS 706          
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: A0A421FQY5_9STRA (CNDH2_C domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FQY5_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.280e-26
Identity = 67/149 (44.97%), Postives = 89/149 (59.73%), Query Frame = 0
Query:    1 MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVKCHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLS 149
            M GTEKY  ET LSK+V  WQ+KL PL++ Q+    FDIH YG+ ++ ++       E  R  K  K  + + + + +D      GDG +      V F  +VNG+ +F+VCRLFLASLQLANNGNV L H   AAD   IPF ++LLS
Sbjct:  258 MSGTEKYVRETDLSKQVSDWQEKLTPLLKQQDAHPPFDIHHYGREIIGRLEE-----ENDRISKTPKKDKKSNKRARLD----PAGDGEE---TETVPFEILVNGKSQFEVCRLFLASLQLANNGNVALSHAHKAADHERIPFEMQLLS 394          
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Match: A0A3R7KER4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KER4_9STRA)

HSP 1 Score: 114 bits (286), Expect = 6.560e-26
Identity = 67/149 (44.97%), Postives = 89/149 (59.73%), Query Frame = 0
Query:    1 MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKVASMLDPLERARAQKAVKCHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFGAVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLS 149
            M GTEKY  ET LSK+V  WQ+KL PL++ Q+    FDIH YG+ ++ ++       E  R  K  K  + + + + +D      GDG +      V F  +VNG+ +F+VCRLFLASLQLANNGNV L H   AAD   IPF ++LLS
Sbjct:  566 MSGTEKYVRETDLSKQVSDWQEKLTPLLKQQDAHPPFDIHHYGREIIGRLEE-----ENDRISKTPKKDKKSNKRARLD----PAGDGGE---TETVPFEILVNGKSQFEVCRLFLASLQLANNGNVALSHAHKAADHERIPFEMQLLS 702          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49478.12135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX7_ECTSI1.630e-6265.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBI6_9PHAE2.730e-6264.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CG43_9STRA6.650e-3046.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D0N0Q7_PHYIT7.240e-2844.30Condensin-2 complex subunit H2, putative n=2 Tax=P... [more]
A0A329RXK6_9STRA1.180e-2743.62Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
H3GF21_PHYRM1.320e-2745.33Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W2QP13_PHYPN2.070e-2743.62Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
W2PCM5_PHYPN1.030e-2643.62Uncharacterized protein (Fragment) n=13 Tax=Phytop... [more]
A0A421FQY5_9STRA1.280e-2644.97CNDH2_C domain-containing protein n=1 Tax=Phytopht... [more]
A0A3R7KER4_9STRA6.560e-2644.97Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031737Condensin-2 complex subunit H2, C-terminalPFAMPF16858CNDH2_Ccoord: 1..152
e-value: 4.2E-36
score: 125.4
IPR031739Condensin-2 complex subunit H2PANTHERPTHR14324FAMILY NOT NAMEDcoord: 5..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49478contigH-elongata_contig49478:325..2590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49478.12135.1mRNA_H-elongata_contig49478.12135.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49478 316..2590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49478.12135.1 ID=prot_H-elongata_contig49478.12135.1|Name=mRNA_H-elongata_contig49478.12135.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp
MRGTEKYAHETQLSKRVGAWQDKLEPLMRSQEKRQAFDIHKYGKSVLTKV
ASMLDPLERARAQKAVKCHEDAGRVSAVDDRSRKGGDGSKEPNLSLVEFG
AVVNGRERFDVCRLFLASLQLANNGNVRLFHGANAADQGSIPFRLELLSL
QETDNMSGYFAPSVSAVEDESPAAHATATAAGTGIENAVVASSKASNAKA
KSGRRKGGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031737CNDH2_C
IPR031739Ncaph2