prot_H-elongata_contig4947.12133.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig4947.12133.1
Unique Name	prot_H-elongata_contig4947.12133.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	293

Homology

[Close]

BLAST of mRNA_H-elongata_contig4947.12133.1 vs. uniprot
Match: D7FVV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV8_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 3.260e-79
Identity = 159/314 (50.64%), Postives = 199/314 (63.38%), Query Frame = 0

Query:    1 MRRRVATVVEETMQNRLAGTQQVDGKGKEQGHGTNAPAGGNGQQKQQDPTISAYLQAFQSAIMAKVRSMCDVQNAREQREAEGLMSEMIQFGDEMQAARKRLDATRARIARLSAESCRDSLRITDAVDNRTVAALEAKAEQARKERDEGGTL-LPSDDALGTVDDGDAAVA-----------GVFAGIDGDVLEPKVSLLIGKLSELPGPLKSVLQEIPELTAALAKMVQNVEEAMGVRDSRTEKLLGKAPPTPLP--KGNAAVAGGA--------SSRYPPEDVRATAREVRLEQARKEWEAAGVGVLGGMFS 292
            MR RV+TVV+ET +  LAG +     G   G    APA        QD   +AYL+AFQ+A+  KVR +C+VQ+ARE RE + L+ E+ QF  +++AAR RL ATRAR+ARLSA++CRD+LR+++A D+R  A LEA    AR+E + GG L L  DDA                       G+F G++  V+EPKVS LIGK++ELPGPLKSVLQEIPELTA+LA  VQ  E A+    SRTE LLGKAPPTPL   KG  A               RYPPED RA ARE R++QARKEWEA GVGV+GG+F+
Sbjct:    1 MRYRVSTVVDETTKKSLAGKK----SGSSAGVAVVAPA--------QDAATTAYLRAFQAAVADKVRDLCEVQDARESREEDELVGEIFQFSHDLRAARSRLYATRARVARLSADTCRDALRVSEAADDRACAVLEASTAHARRESETGGPLPLRIDDAAXXXXXXXXXXXXXXXXXXXXXXGIFQGLETGVVEPKVSALIGKMAELPGPLKSVLQEIPELTASLAVSVQEAEAAIKAGQSRTEALLGKAPPTPLSSKKGKGAXXXXXXXXANVVEDERYPPEDARAAAREARVQQARKEWEAIGVGVVGGIFN 302

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig4947.12133.1 vs. uniprot

BLAST of mRNA_H-elongata_contig4947.12133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FVV8_ECTSI	3.260e-79	50.64	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig4947	contig	H-elongata_contig4947:1495..2373 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig4947.12133.1	mRNA_H-elongata_contig4947.12133.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig4947 1495..2373 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig4947.12133.1 ID=prot_H-elongata_contig4947.12133.1|Name=mRNA_H-elongata_contig4947.12133.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=293bp
MRRRVATVVEETMQNRLAGTQQVDGKGKEQGHGTNAPAGGNGQQKQQDPT
ISAYLQAFQSAIMAKVRSMCDVQNAREQREAEGLMSEMIQFGDEMQAARK
RLDATRARIARLSAESCRDSLRITDAVDNRTVAALEAKAEQARKERDEGG
TLLPSDDALGTVDDGDAAVAGVFAGIDGDVLEPKVSLLIGKLSELPGPLK
SVLQEIPELTAALAKMVQNVEEAMGVRDSRTEKLLGKAPPTPLPKGNAAV
AGGASSRYPPEDVRATAREVRLEQARKEWEAAGVGVLGGMFS*