prot_H-elongata_contig49433.12132.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: A0A6H5L4C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C0_9PHAE) HSP 1 Score: 176 bits (447), Expect = 9.360e-52 Identity = 86/104 (82.69%), Postives = 96/104 (92.31%), Query Frame = 0
Query: 1 MGLPLRLPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGDAICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAKAK 104
MGLPL LP DAHHTLYVEGIP D SERELAHIFRPFPGYISLRLRAKGGR ++G++S++ +AICFVEFESSYHATIAKMG ADYRLDK+DRN+ VLRIEYAK+K
Sbjct: 175 MGLPLGLPSDAHHTLYVEGIPGDVSERELAHIFRPFPGYISLRLRAKGGR-SLGSASANVEAICFVEFESSYHATIAKMGAADYRLDKIDRNSAVLRIEYAKSK 277
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: A0A835Z002_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z002_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.950e-31 Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 0
Query: 1 MGLPLRLPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGD----AICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAKAKGG 106
MGLPL+LP DA TLYVEGIP DASERE+AHIFRPFPGY SLR+R K S+ GD A+CFVEF+++Y A++AK+ DY++D+ D L + YA+ + G
Sbjct: 1 MGLPLQLPPDASSTLYVEGIPKDASEREVAHIFRPFPGYQSLRIRHK--------ESARGDGAQRAMCFVEFDNAYQASVAKIACGDYQIDRTDPQAGTLIVHYARGRRG 102
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: A0A6J0KMJ8_RAPSA (nuclear speckle RNA-binding protein A-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0KMJ8_RAPSA) HSP 1 Score: 93.6 bits (231), Expect = 6.650e-22 Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = 0
Query: 5 LRLPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGDAICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAKAKGGGXRXXXRGGDR 117
LRLP DA TL+VEG+PSD S RE+AHIFRPFPGY +RL K + G+ +CFV+FE+ A A+ + YR+D+ +R++ +LRI++++ G R RGG R
Sbjct: 45 LRLPPDASSTLFVEGLPSDCSMREVAHIFRPFPGYKEVRLVTKDSKHRNGDLI----ILCFVDFENPACAATARNALQGYRMDEEERDSKILRIQFSRNPG--PRPGQRGGRR 151
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: A0A6L2J5P6_TANCI (RNA-binding protein 1-like n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2J5P6_TANCI) HSP 1 Score: 90.9 bits (224), Expect = 6.690e-20 Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 0
Query: 5 LRLPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGD--AICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAKAKGGGXRXXXRGGDRDR 119
+ LP DA +TL+VEG+PS+ S RE+AHIFRPF GY +RL K R SSGD +CFV+FES A AK + Y+ D+ DR++ +LR+++A+ G R G R R
Sbjct: 137 IALPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESR------HSSGDPLVLCFVDFESPAEAATAKDALHGYKFDEHDRDSGILRMQFARNPGVRTGGSGRSGGRSR 247
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: A0A833QTM7_9POAL (RRM domain-containing protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QTM7_9POAL) HSP 1 Score: 91.7 bits (226), Expect = 1.020e-19 Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0
Query: 4 PLRLPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGDAICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAKAKG 105
PL LP DA TLYVEG+PS+ + RE++HIFRPF GY +RL K + G++ +CFV+F S HA +A + YRLD DR++ VLR+++A+ G
Sbjct: 214 PLSLPPDASSTLYVEGLPSNCTRREVSHIFRPFVGYREVRLVNKEPKHVKGST----HILCFVDFASPAHAAVALDALQGYRLDDHDRDSSVLRLQFARNPG 311
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: UPI0010A4754B (RNA-binding protein 1-like isoform X4 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4754B) HSP 1 Score: 89.0 bits (219), Expect = 1.060e-19 Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0
Query: 7 LPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGDAICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAK----AKGGGXR 109
LP DA +TLYVEG+PS+ + RE+AHIFRPF GY +RL +K R G+ +CFV+F S HA A + Y+ D+LDRN+ LR ++A+ GGG R
Sbjct: 84 LPPDATNTLYVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPL----VLCFVDFVSPAHAATAMDALQGYKFDELDRNSVNLRFQFARYPGARSGGGHR 186
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: A0A5N6LL43_9ASTR (RRM domain-containing protein n=3 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LL43_9ASTR) HSP 1 Score: 89.7 bits (221), Expect = 1.400e-19 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 0
Query: 7 LPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGDAICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAKAKG 105
LP DA +TL++EG+PSD S RE+AHIFRPF GY +RL KG + + G+ +CFV+F+S A AK + Y+ D+ DR++ LR+++A+ G
Sbjct: 127 LPPDASNTLFIEGLPSDCSRREVAHIFRPFVGYKEVRLVTKGSKHSNGDPF----VLCFVDFDSPAEAATAKDALQGYKFDEHDRDSVSLRMQFARNPG 221
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: UPI001CB91082 (RNA-binding protein 1-like isoform X1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB91082) HSP 1 Score: 89.4 bits (220), Expect = 2.500e-19 Identity = 53/117 (45.30%), Postives = 71/117 (60.68%), Query Frame = 0
Query: 7 LPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGDAICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAK----AKGGGXRXXXRGGDRDR 119
LP DA +TL+VEG+PS+ S RE+AHIFRPF GY +RL K R +SS +CFV+FES A AK + Y+ D+ DR++ LR+++A+ GGG R GG R R
Sbjct: 137 LPADASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESR----HSSKDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRMQFARYPGARTGGGARSS--GGSRGR 247
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: A0A5N6LL59_9ASTR (RRM domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LL59_9ASTR) HSP 1 Score: 89.7 bits (221), Expect = 5.040e-19 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 0
Query: 7 LPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGDAICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAKAKG 105
LP DA +TL++EG+PSD S RE+AHIFRPF GY +RL KG + + G+ +CFV+F+S A AK + Y+ D+ DR++ LR+++A+ G
Sbjct: 208 LPPDASNTLFIEGLPSDCSRREVAHIFRPFVGYKEVRLVTKGSKHSNGDPF----VLCFVDFDSPAEAATAKDALQGYKFDEHDRDSVSLRMQFARNPG 302
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Match: V4KAG6_EUTSA (RRM domain-containing protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4KAG6_EUTSA) HSP 1 Score: 88.2 bits (217), Expect = 6.560e-19 Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 0
Query: 5 LRLPGDAHHTLYVEGIPSDASERELAHIFRPFPGYISLRLRAKGGRGNVGNSSSSGDAICFVEFESSYHATIAKMGVADYRLDKLDRNTPVLRIEYAKAKGGGXRXXXRGGDR 117
LRLP DA +TL+VEG+PS+ S RE+AHIFRPF GY +RL K + G+ +CFV+F++S A A+ + YR+D+ D ++ +L+I++++ G R RGG R
Sbjct: 139 LRLPPDASNTLFVEGLPSNCSRREVAHIFRPFLGYREVRLVTKDSKQRNGDPI----VLCFVDFDNSACAATARTALQGYRMDEDDPDSKILQIQFSRNPG--PRPGQRGGRR 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49433.12132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig49433.12132.1 ID=prot_H-elongata_contig49433.12132.1|Name=mRNA_H-elongata_contig49433.12132.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bpback to top |