prot_H-elongata_contig4929.12114.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4929.12114.1
Unique Nameprot_H-elongata_contig4929.12114.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1238
Homology
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BLAST of mRNA_H-elongata_contig4929.12114.1 vs. uniprot
Match: D7FVD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD6_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 6.720e-74
Identity = 192/469 (40.94%), Postives = 268/469 (57.14%), Query Frame = 0 
Query:  782 MASMQQELHLLRRTPVQQLEKIYFLRASAMANRIQRFWR-NLRGEARFQHPSREHSVGRGSQPSKRDTFGEKWVGVRRKEKITAPEMNWLRSDREPTSVLTLEALRLRVAAQQRAKQHDALEAPNVDVDAGRTLGTI-DSIYDLVGALHRSEMERIATAKRRGERLAKFRRLQNQLLNPPRLASVDSFHPKTDVSTDTSFDGSQGWCRLRVEEVCDKWQVTPDSAEQRRGERAHVLAAAVARGEGSKWWIVSLPGDVG-YDELVDIRSVEPPWATTSI--------CKGW-RHQSAGTTTDMGDNVAGGRDYDSDEASLWWYTYASTDTGKATTQRREDAVFTELVEKAKPSSARRRERLEDQERKRRLRIARKSQRIVNEVIRQQGATRCLELSCWRGSVSATQRIAAIVIQRRVRGVLQRKKTVVLRSEMRVFGALQILMNELRRPELERTVSDNPLITLPDVLAEH 1238
            M  + QEL+LL +TP +   +I  LRA A A  IQR WR + +G   +  PS   SV   ++P          +G+  K   TAPE++  RSD  PT  +TLEAL  RVA++Q+AK+H  L     +   G T     D  + L  A ++S   R + AKRR  RLA FR+LQ+QLL PP+L S      +T VS     +GSQ    +    V   W  T D A++ R +RAH LA A A+  G K W  SLP DVG YD+L+DIR + P W T ++          G+ R+Q     T  G +  G R +DSDEASLWWY Y++     +  Q+ +D VF EL+E+AK +  RR+E  E  E++ +L +ARK Q I++++I ++    C  LSC++  V+  QR AAI IQ  +RG L+RK+  +LR+E RVFGALQ+L+ ELR+PELE   +  PL TL  +LA+H
Sbjct:    1 MTYITQELNLLLKTPAEHCLRIDELRAEASARHIQRVWRCHSQG---YSCPSTGASVRDSARP----------IGLG-KTFFTAPEIS-SRSDHIPTLDITLEALGRRVASRQQAKEH--LRDTKQERSGGMTNKMAQDRAWQLTAAFNQSHTGRCSAAKRRSTRLANFRKLQDQLLRPPKLNSTG----RTSVSAKRR-EGSQRHQMVMDTAVDKNWYETEDPAQRDRAQRAHKLALAAAKDSGIKPWATSLPSDVGGYDDLLDIRRLVPAWPTHTVGGRGALDFVDGFIRNQH----TSDGGSGTGDRKFDSDEASLWWYVYSTNGAQTSGLQQEQDGVFVELLERAKTTPKRRKEHAERDEQQHQLMVARKRQIIIDKMIHRRKVASCPSLSCFKQRVTLAQRRAAITIQAFIRGCLERKQASLLRAEARVFGALQVLLTELRQPELEAEDTTRPLQTLGVILADH 443
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4929.12114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVD6_ECTSI6.720e-7440.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 1173..1195
e-value: 0.18
score: 20.9
coord: 714..736
e-value: 0.073
score: 22.2
coord: 737..759
e-value: 1.8
score: 17.6
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 718..736
e-value: 0.047
score: 13.5
coord: 1177..1193
e-value: 0.0091
score: 15.7
coord: 740..758
e-value: 0.066
score: 13.0
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 715..743
score: 7.529
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1174..1202
score: 8.023
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 739..766
score: 8.517
NoneNo IPR availableGENE3D1.20.5.190coord: 717..757
e-value: 1.4E-7
score: 33.2
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 93..239
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 85..242
e-value: 5.1E-7
score: 31.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4929contigH-elongata_contig4929:4161..11084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4929.12114.1mRNA_H-elongata_contig4929.12114.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4929 4161..11084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4929.12114.1 ID=prot_H-elongata_contig4929.12114.1|Name=mRNA_H-elongata_contig4929.12114.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1238bp
QALSSLDVARSIKTTTARLKMALSSPTLTATLKGFGWPKSRGKDEITENQ
DRGLRPSQADKVACRDQVNTSKHSPLWPGMGQISSDIPTSSAHCEVSAAK
NTLRVTVFRASGLSENIVKGGFGRTTQNVTQDTYIKLKMCDVAVATSAVM
GEGQECIWGKRNEGECVEISIPASVLSQGGALGSLPLVLEMWNRSNKERE
KDNFLGSTEIQLKDWLGRRATWAELEFNGSLGGYVELSVGMSPSRTADAF
IGSGDVSLKYILGIGATWIDISRENATTGRVKVYVESPDLHRIGLDGRHA
GDYEGNEQRAGETKTIWKASRADLDINLQGDIIEGDESGRIELGPAEEDE
ERNIGIAIAPERVASDELTISSPGHIARHDPELMQLNNIFASAVEERLSP
NSEIGVASQVADDQPQPRDSWDEQTPALAKTEDSESAMISHDEDNTVGME
KHKKTGGIDGRDDARGGKEFTSREFGRATIKLASAGLQRRLQGGAATTLE
LASTETPARHVKTAPGDENMATTFNSSADATTVNSHVSLTTESLKAQTKE
HIFKPHQNRRLGVGESSDDESINRRNFKSPGESLSETNHQHTVICTKRAS
NMHKIVDEDGDGNVKYLGTEVINQPSSFTQAFNKENQAQLSDGPTDPTTR
VDSSSVIPSAGFVVRDKIKRIARARDIAGRRGRANQAHGILSRGHAGLVS
NQASSGVVAVERKDRVRLVTIIQRALRGWSARRSLRRCQRAAAYIQAAFR
GHRERVYFLGLRARTRCVRAEEQRACKRRSRMASMQQELHLLRRTPVQQL
EKIYFLRASAMANRIQRFWRNLRGEARFQHPSREHSVGRGSQPSKRDTFG
EKWVGVRRKEKITAPEMNWLRSDREPTSVLTLEALRLRVAAQQRAKQHDA
LEAPNVDVDAGRTLGTIDSIYDLVGALHRSEMERIATAKRRGERLAKFRR
LQNQLLNPPRLASVDSFHPKTDVSTDTSFDGSQGWCRLRVEEVCDKWQVT
PDSAEQRRGERAHVLAAAVARGEGSKWWIVSLPGDVGYDELVDIRSVEPP
WATTSICKGWRHQSAGTTTDMGDNVAGGRDYDSDEASLWWYTYASTDTGK
ATTQRREDAVFTELVEKAKPSSARRRERLEDQERKRRLRIARKSQRIVNE
VIRQQGATRCLELSCWRGSVSATQRIAAIVIQRRVRGVLQRKKTVVLRSE
MRVFGALQILMNELRRPELERTVSDNPLITLPDVLAEH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR035892C2_domain_sf