prot_H-elongata_contig49258.12108.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49258.12108.1
Unique Nameprot_H-elongata_contig49258.12108.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length435
Homology
BLAST of mRNA_H-elongata_contig49258.12108.1 vs. uniprot
Match: D8LP19_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP19_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 7.920e-111
Identity = 234/428 (54.67%), Postives = 278/428 (64.95%), Query Frame = 0
Query:    8 QGLCRVLELMLSGDSDGRVVSVPVPLILALVERVQRMTPNL-KVKGPQAFVPVAQGALSHGALRTIYSALSIVACRLLDALAATPRPTVLRNGRRYCRALIQGIARPSTAGSLRAAGYRSVARALLQLGAGASLDLAMPALPALLEEVRVIVEASEPQITADVRGSNTASGMTVSTAWTGATVPRYMSSPVGTTASGGMRIEPTMSARKSSQKKQRKLREREVGRALAAADAAVAASATGLMSASNGAQGGRGSMEVGLVTGASALAEREAVCAALACTARLVGCCRGHLPLAGRQAVEDVLYRGLDILARAGEKSFVESLGAGTKRAPSRAGSL-------RLVEPLVAREFVRLAQECLVTPLADGTRSGALSIALAACRSLESHPDERLAAASQRALTSCGSILYPRAAPLHLPHAVTSQARAWG 427
            QGLC VLELML+GDS+GR V+VPV LILALVERVQRM  ++ K +GPQ F+PVAQGALSHGAL TI  +L + A RLL ALA T   TVLR  RR+CRAL+QG+A+PS AGSLRAAGYR+V+RA+LQLG GA+  LA PALPA+L EVR  V ASEP+             +    A TGA  P   +  VG  +  GM IEP MSARKSSQK                                               TGA+ALAE +AVCA L+C +R+V CC+GHLPL GR AVE+VL+RGL++L+ AG  +   S G G                  RL +P VAREF+ LA  CL+TPLADGTRSG+LS+A+AA RS  SHPD+RLAAASQ+AL  CG++LYPRAAPLHLPHAVTSQARAWG
Sbjct:  306 QGLCHVLELMLTGDSNGRPVAVPVGLILALVERVQRMVSSVVKGQGPQVFIPVAQGALSHGALSTIRPSLGLAASRLLHALATTEASTVLRIARRFCRALVQGMAKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRSAVAASEPEAXXXXXXXXXXXSVEFVAA-TGA--PGVAA--VGGGSKKGMGIEPAMSARKSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXRTGAAALAEEQAVCAGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLSHAGGAAK-GSRGDGXXXXXXXXXXXXXXRRCARLEDPRVAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLAAASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWG 718          
BLAST of mRNA_H-elongata_contig49258.12108.1 vs. uniprot
Match: A0A6H5JJU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU2_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 2.850e-98
Identity = 210/432 (48.61%), Postives = 249/432 (57.64%), Query Frame = 0
Query:    8 QGLCRVLELMLSGDSDGRVVSVPVPLILALVERVQRMTPNL-KVKGPQAFVPVAQGALSHGALRTIYSALSIVACRLLDALAATPRPTVLRNGRRYCRALIQGIARPSTAGSLRAAGYRSVARALLQLGAGASLDLAMPALPALLEEVRVIVEASEPQITADVRGSNTASGMTVSTAWTGATVPRYMSSPVGTTASGGMRIEPTMSARKSSQKKQRKLREREVGRALAAADAAVAASATGLMSASNGAQGGRGSMEVGLVTGASALAEREAVCAALACTARLVGCCRGHLPLAGRQAVEDVLYRGLDILARA--------GEKSFVESLGA---GTKRAPSRAGSLRLVEPLVAREFVRLAQECLVTPLADGTRSGALSIALAACRSLESHPDERLAAASQRALTSCGSILYPRAAPLHLPHAVTSQARAWG 427
            +GLC VLELML+GDS+GR V+VPV LILALVERVQRM  ++ K +GPQ F+PVAQGALSHGAL  I  +L + A RLL ALA T   TVLRN RR+CRAL+QG+ +PS AGSLRAAGYR+V+RA+LQLG GA+  LA PALPA+L EVR  V ASEP+                                                                                                          AL+E +AVCA L+C +R+V CC+GHLPL GR AVE+VL+RGL++L+ A        G        GA   G + AP       L +P VAREF  LA  CL+TPLADGTRSG+LS+A+AA RSL SH DERLAAASQ+AL  CG+ILYPRAAPLHLPHAVTSQARAWG
Sbjct:  396 KGLCHVLELMLTGDSNGRPVAVPVGLILALVERVQRMVSSVVKGQGPQVFIPVAQGALSHGALSVIRPSLGLAASRLLHALATTEASTVLRNARRFCRALVQGMGKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRAAVAASEPEXXXXXXXXXX------------------------------------------------------------------------------------------XXXXXXALSEEQAVCAGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLSHAAGAAKGSRGNXXXXXXXGASGEGRRCAP-------LEDPRVAREFFGLAHACLMTPLADGTRSGSLSVAIAAFRSLASHSDERLAAASQQALAGCGAILYPRAAPLHLPHAVTSQARAWG 730          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49258.12108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP19_ECTSI7.920e-11154.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JJU2_9PHAE2.850e-9848.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49258contigH-elongata_contig49258:1825..4037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49258.12108.1mRNA_H-elongata_contig49258.12108.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49258 1825..4037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49258.12108.1 ID=prot_H-elongata_contig49258.12108.1|Name=mRNA_H-elongata_contig49258.12108.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=435bp
MVTVACSQGLCRVLELMLSGDSDGRVVSVPVPLILALVERVQRMTPNLKV
KGPQAFVPVAQGALSHGALRTIYSALSIVACRLLDALAATPRPTVLRNGR
RYCRALIQGIARPSTAGSLRAAGYRSVARALLQLGAGASLDLAMPALPAL
LEEVRVIVEASEPQITADVRGSNTASGMTVSTAWTGATVPRYMSSPVGTT
ASGGMRIEPTMSARKSSQKKQRKLREREVGRALAAADAAVAASATGLMSA
SNGAQGGRGSMEVGLVTGASALAEREAVCAALACTARLVGCCRGHLPLAG
RQAVEDVLYRGLDILARAGEKSFVESLGAGTKRAPSRAGSLRLVEPLVAR
EFVRLAQECLVTPLADGTRSGALSIALAACRSLESHPDERLAAASQRALT
SCGSILYPRAAPLHLPHAVTSQARAWGTDRHGTQ*
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