prot_H-elongata_contig49051.12081.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49051.12081.1
Unique Nameprot_H-elongata_contig49051.12081.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length287
Homology
BLAST of mRNA_H-elongata_contig49051.12081.1 vs. uniprot
Match: D8LHC6_ECTSI (Allergen V5/Tpx-1 related n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHC6_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 5.030e-44
Identity = 159/313 (50.80%), Postives = 175/313 (55.91%), Query Frame = 0
Query:    1 MERRKAVNQLRGNR-SNASSPAGSTCHSPAAAALSRGVNSSRTGLGGGSPVKT--PTSPL---FSTLERXXXXXXXXXXXA-----------LTAN--HPLSPKRSTTGTLGWGTPPRSLARSID--QTDPASXXXXXXXXXXXXXXXXXXXXASTIGQAVPGRGYETGVPSKSDRTEEGQEDEK-----VGGGTPETVLAEINELRADPMAYATKLEGLLQHYDKTMYNSPTGPPVQTTEGTLPLLEAIEVLKATPPLXXXXXXXGMQQAAADHVKDLATTSRXXXXXXXXXXAADRMNRYGQFFQVSACVC 287
            ++RR AVNQLRG + SN SSPAGS   +P     SRG+  S  G   GSPV++  P S     FSTLER        XXX            LT N  HPLSP R  +     G  P   A   +  Q+ P  XXXXXXXXXXXXXXXXXXXX             + GV +                  VGGGTPETVLAEINELRADP  YATKLE L + YDK MY SPTGPPVQTTEG  PLLE + +LK T  L       GMQQAAADHVKDLA TSR          AADRMNRYGQFFQV+  VC
Sbjct:  769 LDRRNAVNQLRGGKLSNVSSPAGSANTTPRGT-NSRGITHSGAG---GSPVRSRSPASRFPSGFSTLERNLEREGGGXXXXXXXXXXXXGGPLTPNAKHPLSPNRPPSSATTAGLSPADSASIAELLQSSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGVMTPXXXXXXXXXXXXXXXXXVGGGTPETVLAEINELRADPKGYATKLEALEEFYDKGMYQSPTGPPVQTTEGVKPLLEVVAMLKTTEALAPLESKEGMQQAAADHVKDLAETSRTGHSGSDGSGAADRMNRYGQFFQVAGEVC 1077          
BLAST of mRNA_H-elongata_contig49051.12081.1 vs. uniprot
Match: A0A2W4UNP3_9CYAN (CAP domain-containing protein n=1 Tax=Leptolyngbya foveolarum TaxID=47253 RepID=A0A2W4UNP3_9CYAN)

HSP 1 Score: 72.4 bits (176), Expect = 3.950e-11
Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 0
Query:  171 ETVLAEINELRADPMAYATKLEGLLQHYDKTMYNSPTGPPVQTTEGTLPLLEAIEVLKATPPLXXXXXXXGMQQAAADHVKDLATTSRXXXXXXXXXXAADRMNRYGQF 279
            E ++AE N++RA+P AYA +LE +  +Y+  +   P  P VQ  EG   L EAI VL+ +PPL       GM   A DH  DL +                R+NRYGQ+
Sbjct:   92 EELIAETNKMRANPAAYAQRLEAIRDYYEGNLVKVPGRPAVQVVEGVGALDEAIAVLRGSPPLGALAFSPGMSFGANDHAADLGSKGITGHFGSDGSDPFARINRYGQW 200          
BLAST of mRNA_H-elongata_contig49051.12081.1 vs. uniprot
Match: A0A6P1AK26_9CYAN (Uncharacterized protein n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AK26_9CYAN)

HSP 1 Score: 60.5 bits (145), Expect = 9.710e-7
Identity = 37/106 (34.91%), Postives = 51/106 (48.11%), Query Frame = 0
Query:  173 VLAEINELRADPMAYATKLEGLLQHYDKTMYNSPTGPPVQTTEGTLPLLEAIEVLKATPPLXXXXXXXGMQQAAADHVKDLATTSRXXXXXXXXXXAADRMNRYGQ 278
            ++ E+N+ RA+P AYA KLE L  +Y+  + + P   P+ T EG   + EAI  L+   PL       GM QAA D V+                   DR+ RYGQ
Sbjct:   99 IVEEMNKARANPNAYADKLEALKPYYEGNLLSLPGKTPLVTEEGLAAVEEAIAFLRDAEPLPPLNVSRGMSQAARDLVQYQGPRGETGHSGRDGSQTWDRIGRYGQ 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49051.12081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHC6_ECTSI5.030e-4450.80Allergen V5/Tpx-1 related n=2 Tax=Ectocarpus TaxID... [more]
A0A2W4UNP3_9CYAN3.950e-1137.61CAP domain-containing protein n=1 Tax=Leptolyngbya... [more]
A0A6P1AK26_9CYAN9.710e-734.91Uncharacterized protein n=1 Tax=Kamptonema sp. SIO... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31157UNCHARACTERIZEDcoord: 178..278
NoneNo IPR availablePANTHERPTHR31157:SF1coord: 178..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49051contigH-elongata_contig49051:195..4135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49051.12081.1mRNA_H-elongata_contig49051.12081.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49051 174..4135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49051.12081.1 ID=prot_H-elongata_contig49051.12081.1|Name=mRNA_H-elongata_contig49051.12081.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=287bp
MERRKAVNQLRGNRSNASSPAGSTCHSPAAAALSRGVNSSRTGLGGGSPV
KTPTSPLFSTLERSSSGLGGTSPAALTANHPLSPKRSTTGTLGWGTPPRS
LARSIDQTDPASPGSSVPELPPAPSAAMAAFAASTIGQAVPGRGYETGVP
SKSDRTEEGQEDEKVGGGTPETVLAEINELRADPMAYATKLEGLLQHYDK
TMYNSPTGPPVQTTEGTLPLLEAIEVLKATPPLEPLESKEGMQQAAADHV
KDLATTSRTGHSGSDGSGAADRMNRYGQFFQVSACVC
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