prot_H-elongata_contig49021.12079.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49021.12079.1
Unique Nameprot_H-elongata_contig49021.12079.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: A0A6H5JJD6_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJD6_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.010e-18
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 0
Query:    1 ISFSSRQIIEAVRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLLLSRGANPGAKTMRDLSP 74
            +  +S  +  AV+ GDV+ VR +LE+GVD N+++P TGRTLLH ACRQG   + SLLLS GANPGA T+R L+P
Sbjct:    3 LKLNSDAVRHAVKDGDVDAVREYLESGVDANLANPNTGRTLLHIACRQGYPAMASLLLSNGANPGATTLRQLTP 76          
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: A0A423U6D9_PENVA (Uncharacterized protein n=2 Tax=Penaeus vannamei TaxID=6689 RepID=A0A423U6D9_PENVA)

HSP 1 Score: 67.0 bits (162), Expect = 6.590e-10
Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    2 SFSSRQIIEAVRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLLLSRGANPGAKTMRDLSPL 75
            S S +++I AVR+ D   VRA L+ G D+++  P+ G TLLH A +   G+I+ +LLSRGA+  A T +  +PL
Sbjct:  202 SHSDKRLIAAVRRSDAEEVRAALDEGADLSLQGPEDGGTLLHLASQDSSGQILEMLLSRGASVDATTSQGFTPL 275          
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: UPI0018A70CB3 (ankyrin-3-like isoform X1 n=2 Tax=Penaeus monodon TaxID=6687 RepID=UPI0018A70CB3)

HSP 1 Score: 65.5 bits (158), Expect = 2.340e-9
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    2 SFSSRQIIEAVRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLLLSRGANPGAKTMRDLSPL 75
            S S + +I AVR+ D   VRA L  G D+++  P+ G TLLH A +   G+++ +LLSRGA+  AKT +  +PL
Sbjct:  202 SHSDKLLIVAVRRNDAAEVRAALNEGADLSVQGPEDGGTLLHLASQGSSGQVLQILLSRGASVDAKTSQGFTPL 275          
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: UPI0018A7CA30 (ankyrin-1-like isoform X1 n=2 Tax=Penaeus monodon TaxID=6687 RepID=UPI0018A7CA30)

HSP 1 Score: 63.5 bits (153), Expect = 1.140e-8
Identity = 31/74 (41.89%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    2 SFSSRQIIEAVRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLLLSRGANPGAKTMRDLSPL 75
            S   + +I AVR+ D   VRA L+ G D+++  P+ G TLLH A +   G+++ +LLSRGA+  AKT +  +PL
Sbjct:  202 SHLDKLLIVAVRRNDAAEVRAALDEGADLSLQGPEDGGTLLHLASQGSSGQVLQILLSRGASVDAKTSQGFTPL 275          
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: A0A0L1KW18_9EUGL (Ankyrin repeat containing protein n=1 Tax=Perkinsela sp. CCAP 1560/4 TaxID=1314962 RepID=A0A0L1KW18_9EUGL)

HSP 1 Score: 57.0 bits (136), Expect = 4.270e-7
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    1 ISFSSRQIIEAVRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLL 57
            +S  +  + E+ RQGDV  +RAFLE+   +N   PKTG TLLH+AC     +IV LL
Sbjct:    5 VSMKNESLYESSRQGDVERIRAFLESSSALNEPDPKTGMTLLHYACHGEQAKIVELL 61          
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: UPI001FB6A518 (ankyrin-1-like n=1 Tax=Penaeus chinensis TaxID=139456 RepID=UPI001FB6A518)

HSP 1 Score: 58.9 bits (141), Expect = 4.500e-7
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    8 IIEAVRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLLLSRGANPGAKTMRDLSP 74
            +I AVR+ D   V+A L+ G D+++  P+ G TLLH A +   G+++ +LLSRGA+  A+T +  +P
Sbjct:  208 LIVAVRRNDAAEVQAALDKGADLSLQGPEDGGTLLHLASQGSSGQVLQMLLSRGASVDARTSQGFTP 274          
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: UPI001FB85A89 (ankyrin-1-like isoform X1 n=3 Tax=Penaeus chinensis TaxID=139456 RepID=UPI001FB85A89)

HSP 1 Score: 56.2 bits (134), Expect = 3.860e-6
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    8 IIEAVRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLLLSRGANPGAKTMRDLSP 74
            +I AVR+ D   VR  L+   D+++  P+ G TLLH A +   G+++ +LLSRGA+  A+T +  +P
Sbjct:  221 LIAAVRRNDAAEVRTALDKEADLSLQGPEDGGTLLHLASQGSSGQVLQMLLSRGASVDARTSQGFTP 287          
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: UPI0004198A13 (ankyrin repeat domain-containing protein n=1 Tax=Adhaeribacter aquaticus TaxID=299567 RepID=UPI0004198A13)

HSP 1 Score: 52.0 bits (123), Expect = 7.330e-6
Identity = 26/67 (38.81%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    9 IEAVRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLLLSRGANPGAKTMRDLSPL 75
            IEAV+ G++  V++ L+   D+  +    G TLLH A ++G G+++ LLL RGA+  A T    SP+
Sbjct:    8 IEAVKSGNLEEVKSLLDNEPDIVNTKDNKGYTLLHLAAQEGNGDLIKLLLERGADINALTEDGQSPM 74          
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: UPI0018643570 (ankyrin repeat domain-containing protein 50-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018643570)

HSP 1 Score: 55.1 bits (131), Expect = 1.050e-5
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 0
Query:   18 NGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLLLSRGANPGAKTMRDLSPL 75
            + VR  L++G  VN + P  GRTLL  A + G G++V LLLSRGA+PG    +  +PL
Sbjct:  498 DSVRLLLDSGASVNQADPADGRTLLAGAAQTGAGDVVELLLSRGADPGIGDHQGQTPL 555          
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Match: A0A1Z8WY38_9BACT (Uncharacterized protein (Fragment) n=2 Tax=Verrucomicrobia TaxID=74201 RepID=A0A1Z8WY38_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 2.730e-5
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   12 VRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGCGEIVSLLLSRGA 62
            VR GD+ GV+A+L+AGVD+N +  + G T LH+A  +G  +IV LL++RGA
Sbjct:  159 VRDGDLAGVQAYLDAGVDIN-ARDENGSTPLHWAALEGHKDIVELLINRGA 208          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49021.12079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JJD6_9PHAE2.010e-1856.76RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A423U6D9_PENVA6.590e-1043.24Uncharacterized protein n=2 Tax=Penaeus vannamei T... [more]
UPI0018A70CB32.340e-943.24ankyrin-3-like isoform X1 n=2 Tax=Penaeus monodon ... [more]
UPI0018A7CA301.140e-841.89ankyrin-1-like isoform X1 n=2 Tax=Penaeus monodon ... [more]
A0A0L1KW18_9EUGL4.270e-747.37Ankyrin repeat containing protein n=1 Tax=Perkinse... [more]
UPI001FB6A5184.500e-740.30ankyrin-1-like n=1 Tax=Penaeus chinensis TaxID=139... [more]
UPI001FB85A893.860e-638.81ankyrin-1-like isoform X1 n=3 Tax=Penaeus chinensi... [more]
UPI0004198A137.330e-638.81ankyrin repeat domain-containing protein n=1 Tax=A... [more]
UPI00186435701.050e-546.55ankyrin repeat domain-containing protein 50-like n... [more]
A0A1Z8WY38_9BACT2.730e-550.98Uncharacterized protein (Fragment) n=2 Tax=Verruco... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 104..119
score: 35.51
coord: 152..166
score: 27.68
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 3..32
e-value: 390.0
score: 8.0
coord: 37..66
e-value: 0.0058
score: 25.9
coord: 136..165
e-value: 3.1E-6
score: 36.7
coord: 103..132
e-value: 0.0091
score: 25.2
coord: 70..99
e-value: 12.0
score: 14.9
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 137..162
e-value: 2.4E-6
score: 27.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 70..102
score: 11.381
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..135
score: 13.918
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 37..69
score: 11.701
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 136..168
score: 13.945
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 62..131
e-value: 5.6E-13
score: 49.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 11..168
score: 51.117
NoneNo IPR availablePFAMPF13637Ank_4coord: 11..58
e-value: 6.3E-7
score: 29.8
NoneNo IPR availablePANTHERPTHR24203FAMILY NOT NAMEDcoord: 37..167
coord: 6..131
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..168
e-value: 2.1E-54
score: 185.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 8..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49021contigH-elongata_contig49021:3214..4047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49021.12079.1mRNA_H-elongata_contig49021.12079.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49021 3214..4047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49021.12079.1 ID=prot_H-elongata_contig49021.12079.1|Name=mRNA_H-elongata_contig49021.12079.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
ISFSSRQIIEAVRQGDVNGVRAFLEAGVDVNISSPKTGRTLLHFACRQGC
GEIVSLLLSRGANPGAKTMRDLSPLHLACNQGHFKVSRLLLEAWAAVDEQ
DQAGTTPLHLSSQKGYSDIVRLLLQCGADRNGLDKSGWTPLHYAAWRGHA
EVARMLMQAGANAKVSNL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf