prot_H-elongata_contig48965.12066.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48965.12066.1
Unique Nameprot_H-elongata_contig48965.12066.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
BLAST of mRNA_H-elongata_contig48965.12066.1 vs. uniprot
Match: D7FPT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT2_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 2.210e-12
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    5 DVRASPRWENLWSEGIRKGDKWDAGVVSPALQNLLDSG 42
            +VRASP WE  WS GI KGD+WD GVVSPALQ LLD G
Sbjct:    8 EVRASPAWEGYWSGGISKGDQWDTGVVSPALQKLLDEG 45          
BLAST of mRNA_H-elongata_contig48965.12066.1 vs. uniprot
Match: A0A836CD04_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD04_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.670e-8
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    2 TARDVRASPRWENLWSEGIRKGDKWDAGVVSPALQNLLDS 41
            T +  +  PRWEN+W+ G++KGD +D G VSPALQ LLD+
Sbjct:    9 TPQQEQGHPRWENIWAAGLKKGDAFDTGRVSPALQQLLDA 48          
BLAST of mRNA_H-elongata_contig48965.12066.1 vs. uniprot
Match: A0A250X9Y7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X9Y7_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 3.400e-7
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    9 SPRWENLWSEGIRKGDKWDAGVVSPALQNLLDSGEFY 45
            S RWE +WS+GI KG  +DAG  SPAL+NLL SG+ +
Sbjct:   20 SSRWEAMWSQGIVKGQAFDAGASSPALKNLLSSGKMH 56          
BLAST of mRNA_H-elongata_contig48965.12066.1 vs. uniprot
Match: A0A835VYK9_9CHLO (Uncharacterized protein n=2 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835VYK9_9CHLO)

HSP 1 Score: 47.4 bits (111), Expect = 6.530e-5
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 0
Query:    9 SPRWENLWSEGIRKGDKWDAGVVSPALQNLLDSGE 43
            S RWE+ WS G+ KG +WD    SP+L +LL SG+
Sbjct:   33 SDRWEDEWSAGVGKGQRWDCAAPSPSLVDLLKSGK 67          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48965.12066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FPT2_ECTSI2.210e-1273.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CD04_9STRA1.670e-855.00S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A250X9Y7_9CHLO3.400e-759.46Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A835VYK9_9CHLO6.530e-551.43Uncharacterized protein n=2 Tax=Chlamydomonas schl... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48965contigH-elongata_contig48965:3988..4122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48965.12066.1mRNA_H-elongata_contig48965.12066.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48965 3988..4122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48965.12066.1 ID=prot_H-elongata_contig48965.12066.1|Name=mRNA_H-elongata_contig48965.12066.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
MTARDVRASPRWENLWSEGIRKGDKWDAGVVSPALQNLLDSGEFY
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