prot_H-elongata_contig48945.12065.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48945.12065.1
Unique Nameprot_H-elongata_contig48945.12065.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length161
Homology
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BLAST of mRNA_H-elongata_contig48945.12065.1 vs. uniprot
Match: A0A6H5KCZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ8_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 2.570e-24
Identity = 63/115 (54.78%), Postives = 77/115 (66.96%), Query Frame = 0 
Query:   43 DRYGYPLHGKESLGR----TGYAGERDRLLYMPMIKGLPDFYESRPKRASK----LSNNSSGFTREKSSSGQLIPLYERAMDWQAKKTEVRAHKLAQREEEEISVCTFQPNVPRR 149
            DR+GYPLH +E LG      G +G R    Y PMIKGLPDFYESRP+R S+    L   + G  RE + +G+   LY+R  +WQAK +EVRA KLAQREE+E+  CTFQPNVP R
Sbjct:  185 DRFGYPLHERECLGSYGAGAGLSGGRGPR-YSPMIKGLPDFYESRPRRQSRDDESLGRRTHGNNRE-AQAGRSASLYQRTTEWQAKASEVRARKLAQREEQELKDCTFQPNVPPR 297
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BLAST of mRNA_H-elongata_contig48945.12065.1 vs. uniprot
Match: D7G313_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G313_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 6.070e-24
Identity = 78/165 (47.27%), Postives = 95/165 (57.58%), Query Frame = 0 
Query:    6 RHREGNGESPATAQGRPSSSDMFCSLDSGRCSRKA-GIDRYGYPLHGKESLGR----TGYAGERDRLLYMPMIKGLPDFYESRPKRASK----LSNNSSGFTREKSSSGQLIPLYERAMDWQAKKTEVRAHKLAQREEEEISVCTFQPNVPRRRMEASPRCTSAA 161
            RHRE  G  P   +   +S+    S DS R    A   DR+GYPLH +E LG      G +G R    Y PMIKGLPDFYESRPKR S+    L   + G  RE + + +   LY+R  +W+AK +EVRA KLAQREE+E+  CTFQPNVP R    S   T AA
Sbjct:  147 RHREPRG--PPRRRHSGNSTGSVGSFDSDRYFTTAVRCDRFGYPLHERECLGSYGAGAGLSGGRGPR-YSPMIKGLPDFYESRPKRQSRDDESLGRRTHGNNRE-AQACRSASLYQRTTEWRAKASEVRARKLAQREEQELRDCTFQPNVPLRGALVSGSVTRAA 307
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48945.12065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCZ8_9PHAE2.570e-2454.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G313_ECTSI6.070e-2447.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48945contigH-elongata_contig48945:3379..4050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48945.12065.1mRNA_H-elongata_contig48945.12065.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48945 3379..4050 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48945.12065.1 ID=prot_H-elongata_contig48945.12065.1|Name=mRNA_H-elongata_contig48945.12065.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
MKRTRRHREGNGESPATAQGRPSSSDMFCSLDSGRCSRKAGIDRYGYPLH
GKESLGRTGYAGERDRLLYMPMIKGLPDFYESRPKRASKLSNNSSGFTRE
KSSSGQLIPLYERAMDWQAKKTEVRAHKLAQREEEEISVCTFQPNVPRRR
MEASPRCTSAA
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