prot_H-elongata_contig48907.12060.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48907.12060.1
Unique Nameprot_H-elongata_contig48907.12060.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length94
Homology
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: A0A6H5L7D8_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7D8_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.790e-47
Identity = 74/88 (84.09%), Postives = 83/88 (94.32%), Query Frame = 0
Query:    1 MRRIMNEWKQVQAEGQAMGEGPCSARGNSSDTFRLKPVGSMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            MRRIM+EWKQVQA+G AMG+G  S++GNSS+TFRLKPVG+MFEWHFTFLGAKDSPFEGGLYHGSI+LP +YPQSGPSVRLLNTN RFK
Sbjct:   41 MRRIMSEWKQVQADGLAMGQGHWSSKGNSSETFRLKPVGNMFEWHFTFLGAKDSPFEGGLYHGSISLPENYPQSGPSVRLLNTNMRFK 128          
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: W7TJJ9_9STRA (Ubiquitin-conjugating enzyme e2 j1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJJ9_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.170e-17
Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    2 RRIMNEWKQVQAEGQAM---GEGPCSARGNSSDTFRLKPV-GSMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            RR++ EW+ + AEG  +   GEG CS   N+++  RL P  G++ EWHF+  G   S +EGG+YHG + LP +YPQ+ P +++LN + RF+
Sbjct:   55 RRLIKEWRGIMAEGLVLMDSGEGNCSLS-NNTEHIRLAPCRGNLHEWHFSVAGPPGSVYEGGIYHGRVILPANYPQTAPRLQMLNPSGRFE 144          
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: F6T7J7_CIOIN (Ubiquitin-conjugating enzyme E2 J1-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6T7J7_CIOIN)

HSP 1 Score: 79.7 bits (195), Expect = 9.180e-16
Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 0
Query:   33 FRLKPVG-SMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            +  KP+  ++FEWHFTF G KDS F+GGLYHG I LPP+YP   PS+ LLN N RF+
Sbjct:   29 YSAKPLDDNLFEWHFTFRGPKDSDFDGGLYHGRIILPPEYPMKPPSIMLLNANGRFE 85          
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: H2ZKI2_CIOSA (UBC core domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZKI2_CIOSA)

HSP 1 Score: 76.3 bits (186), Expect = 1.390e-14
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   40 SMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            ++FEWHFTF G K+S F+GG+YHG I LPP+YP   PS+ LLN N RF+
Sbjct:   37 NLFEWHFTFRGPKESDFDGGVYHGRIILPPEYPMKPPSIMLLNANGRFE 85          
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: C3Z989_BRAFL (UBC core domain-containing protein n=4 Tax=Branchiostoma TaxID=7737 RepID=C3Z989_BRAFL)

HSP 1 Score: 72.8 bits (177), Expect = 2.740e-14
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   40 SMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            ++FEWHFT  G  DS F+GG+YHG ITLPP+YP   PS+ LL  N RF+
Sbjct:   37 NLFEWHFTVRGPPDSDFQGGMYHGRITLPPEYPMKPPSIMLLTPNGRFE 85          
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: A0A183HI47_9BILA (UBIQUITIN_CONJUGAT_2 domain-containing protein n=1 Tax=Onchocerca flexuosa TaxID=387005 RepID=A0A183HI47_9BILA)

HSP 1 Score: 72.4 bits (176), Expect = 3.450e-14
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   28 NSSDTFRLKPV-GSMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            N +D +  +P+  ++FEWHFT  G KD+ FEGG+YHG I LP DYP   PSV +L  N RF+
Sbjct:    9 NPTDMYYAQPLEDNLFEWHFTVRGPKDTDFEGGIYHGRILLPIDYPMKPPSVIMLTPNGRFQ 70          
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: A0A7J7JIQ2_BUGNE (UBE2J1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JIQ2_BUGNE)

HSP 1 Score: 74.7 bits (182), Expect = 5.620e-14
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   28 NSSDTFRLKPV-GSMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            N ++ +  +P+  ++FEWHFT  G  DS F+GG+YHG I LPPDYP   PS+  L TN RF+
Sbjct:   24 NPTEQYFAQPLEDNLFEWHFTIRGPSDSDFDGGIYHGRIILPPDYPMKPPSIMFLTTNGRFE 85          
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: A0A7J7IT47_BUGNE (UBE2J1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7IT47_BUGNE)

HSP 1 Score: 74.7 bits (182), Expect = 6.530e-14
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   28 NSSDTFRLKPV-GSMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            N ++ +  +P+  ++FEWHFT  G  DS F+GG+YHG I LPPDYP   PS+  L TN RF+
Sbjct:   24 NPTEQYFAQPLEDNLFEWHFTIRGPSDSDFDGGIYHGRIILPPDYPMKPPSIMFLTTNGRFE 85          
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: A0A2I0VNA7_9ASPA (Ubiquitin-conjugating enzyme E2 32 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VNA7_9ASPA)

HSP 1 Score: 71.2 bits (173), Expect = 7.710e-14
Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 0
Query:    1 MRRIMNEWKQVQAEGQAMGEGPCSARGNSSDTFRLKPVG-SMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            ++RI+ E K++Q+              N SD F   P+  ++FEW F  LG +DS FEGG+YHG I LP DYP   PS  LL  N RF+
Sbjct:   13 VKRILQEVKEMQS--------------NPSDDFMSLPLEENIFEWQFAILGPRDSEFEGGIYHGRIQLPADYPFKPPSFMLLTPNGRFE 87          
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Match: A0A5S6QQZ0_TRIMR (UBIQUITIN_CONJUGAT_2 domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QQZ0_TRIMR)

HSP 1 Score: 74.3 bits (181), Expect = 7.740e-14
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   28 NSSDTFRLKPVG-SMFEWHFTFLGAKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFK 88
            N+++ F   P+  ++FEWHFT  G  DS F+GG++HG ITLPPDYP   PS+ +L  N RF+
Sbjct:   24 NATELFVAAPLNDNLFEWHFTIRGPADSDFDGGIFHGRITLPPDYPMKPPSIIMLTPNGRFE 85          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48907.12060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7D8_9PHAE1.790e-4784.09UBC core domain-containing protein n=2 Tax=Ectocar... [more]
W7TJJ9_9STRA2.170e-1742.86Ubiquitin-conjugating enzyme e2 j1 n=2 Tax=Nannoch... [more]
F6T7J7_CIOIN9.180e-1659.65Ubiquitin-conjugating enzyme E2 J1-like n=1 Tax=Ci... [more]
H2ZKI2_CIOSA1.390e-1461.22UBC core domain-containing protein n=1 Tax=Ciona s... [more]
C3Z989_BRAFL2.740e-1459.18UBC core domain-containing protein n=4 Tax=Branchi... [more]
A0A183HI47_9BILA3.450e-1451.61UBIQUITIN_CONJUGAT_2 domain-containing protein n=1... [more]
A0A7J7JIQ2_BUGNE5.620e-1450.00UBE2J1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A... [more]
A0A7J7IT47_BUGNE6.530e-1450.00UBE2J1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A... [more]
A0A2I0VNA7_9ASPA7.710e-1442.70Ubiquitin-conjugating enzyme E2 32 n=1 Tax=Dendrob... [more]
A0A5S6QQZ0_TRIMR7.740e-1450.00UBIQUITIN_CONJUGAT_2 domain-containing protein n=1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 28..81
e-value: 9.6E-10
score: 38.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 2..93
score: 11.95
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..91
e-value: 1.5E-19
score: 72.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..86
NoneNo IPR availablePANTHERPTHR24068:SF168UBIQUITIN-CONJUGATING ENZYME E2 J1coord: 28..88
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 28..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48907contigH-elongata_contig48907:1115..2040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48907.12060.1mRNA_H-elongata_contig48907.12060.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48907 1085..2040 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48907.12060.1 ID=prot_H-elongata_contig48907.12060.1|Name=mRNA_H-elongata_contig48907.12060.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
MRRIMNEWKQVQAEGQAMGEGPCSARGNSSDTFRLKPVGSMFEWHFTFLG
AKDSPFEGGLYHGSITLPPDYPQSGPSVRLLNTNQRFKARMGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD