prot_H-elongata_contig48811.12050.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48811.12050.1
Unique Nameprot_H-elongata_contig48811.12050.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length285
Homology
BLAST of mRNA_H-elongata_contig48811.12050.1 vs. uniprot
Match: D8LC29_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC29_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 2.280e-62
Identity = 100/147 (68.03%), Postives = 122/147 (82.99%), Query Frame = 0
Query:   34 RWEGTRAVVSHPKIRGLPHVRISQPPPRSRYWRWHSAGDGHICTAEATYLVLKDFERASGVTTEGGRLEDLLFLFALMSSRIKDAYNTDPNKVGKELPVSEEAKQRRRMKAVRLNSLVKPKYRGLNAVREAQGEAVAVEEFFRRRRG 180
            RW  T AVV HPK++GL HVRI +PP  S++WRWH+ G+GHICTAEATYLVLKDFE A+G+ T GGRLED+LFLFALM SRIK AY +DP+K+GK  P SEEAKQRRR++ V+L+ LVK KY+GL+A+RE  G+  A+EEFFRRRRG
Sbjct:  147 RWVNTGAVVGHPKLKGLRHVRIREPPAVSQFWRWHTEGEGHICTAEATYLVLKDFEEATGLVTRGGRLEDILFLFALMGSRIKAAYESDPSKLGKSCPSSEEAKQRRRVRLVQLDRLVKAKYKGLDALRERDGDEAAIEEFFRRRRG 293          
BLAST of mRNA_H-elongata_contig48811.12050.1 vs. uniprot
Match: A0A484EFL7_BRELC (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFL7_BRELC)

HSP 1 Score: 79.0 bits (193), Expect = 3.660e-13
Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 0
Query:   25 VISYLNCRDRWEGTRAVVSHPKIRGLPHVRISQPPPRSRYWRWHSAGDGHICTAEATYLVLKDFERAS-------GVTTEGGRLEDLLFLFALMSSRIKDAYN--TDPNKVGKELPVSEEAKQRRRM 142
             + +++C   W+    +++HP +  L HVR+SQPP  S +WR+H AG G + T EA  L+L+++   +        V +E  +L DLLF F L   RI D +N   DP++   + P+    K+RRR+
Sbjct:  121 TLIFIDCP--WQKAPVIMNHPSLANLRHVRLSQPPKESNFWRYHKAGAGCVSTIEAIKLMLEEYTAVAKTANIETAVGSENTQLSDLLFFFKLQFLRIVDHFNHEADPDR---KPPMDAAEKERRRL 242          
BLAST of mRNA_H-elongata_contig48811.12050.1 vs. uniprot
Match: A0A1V9YI10_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YI10_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.990e-12
Identity = 40/129 (31.01%), Postives = 75/129 (58.14%), Query Frame = 0
Query:   19 DIGLDYVISYLNCRDRWEGTRAVVSHPKIRGLPHVRISQPPPRSRYWRWHSAGDGHICTAEATYLVLKDFERASGVTTEGGRLED----LLFLFALMSSRIKDAYNTDPNKVGKELPVSEEAKQRRRMK 143
            DI     + +++C   W+    +++HP +  L  V++++PP  S++WR+HS+G+G I T EA YL+L+++  A         + D    LL+ F ++   I + + TDPN+  +  P+SE AK+ +R++
Sbjct:  115 DIDQIETLIFIDCP--WQKGPTILNHPSVAHLRAVKLAKPPLHSKFWRYHSSGEGCISTIEAVYLMLEEYLTALQKRNLTPSMTDPVGGLLYFFNIVHDVILETHKTDPNRQLERAPMSEAAKELQRLR 241          
BLAST of mRNA_H-elongata_contig48811.12050.1 vs. uniprot
Match: A0A1W0A5Q3_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5Q3_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.290e-11
Identity = 42/146 (28.77%), Postives = 80/146 (54.79%), Query Frame = 0
Query:    1 MVLEDSDRSQPAYRRACCDIGLDYVISYLNCRDRWEGTRAVVSHPKIRGLPHVRISQPPPRSRYWRWHSAGDGHICTAEATYLVLKDFERASGVT----TEGGRLEDLLFLFALMSSRIKDAYNTDPNKVGKELPVSEEAKQRRRM 142
            +VLE+ D           D+     + +++C   W+   A+++   I  L  V++++PP  S++WR+HS+G+G I T EA YL+L+++  A        +    + DLL+ F ++   I + + ++PN+  +  P+SEE K R+R+
Sbjct:   98 LVLEELD-----------DLASIDTLIFIDCP--WQKGPAILNDSSISHLRSVKLAKPPLHSKFWRYHSSGEGCISTIEAVYLMLEEYSAACHARDIPLSSTDNVADLLYFFHMIHDVILETHKSNPNRQLERAPMSEEEKNRQRI 230          
BLAST of mRNA_H-elongata_contig48811.12050.1 vs. uniprot
Match: A0A067D5L9_SAPPC (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D5L9_SAPPC)

HSP 1 Score: 72.8 bits (177), Expect = 4.450e-11
Identity = 36/122 (29.51%), Postives = 71/122 (58.20%), Query Frame = 0
Query:   25 VISYLNCRDRWEGTRAVVSHPKIRGLPHVRISQPPPRSRYWRWHSAGDGHICTAEATYLVLKDFERASGVT----TEGGRLEDLLFLFALMSSRIKDAYNTDPNKVGKELPVSEEAKQRRRM 142
             + +++C   W+   A+++   +  L  V++++PP  S++WR+HS+GDG + T EA YL+L+++  A        T    + ++L+ F L+   I + + +DPN+     P+SE  K+R+R+
Sbjct:  114 TLIFIDCP--WQKGPAILNDKSLSHLRTVKLAKPPLHSKFWRYHSSGDGCVSTIEAVYLMLEEYTAAMHARNLALTSTDDVSEILYYFNLVHDTILETHKSDPNRQLDRAPMSEAEKERQRL 233          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48811.12050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LC29_ECTSI2.280e-6268.03tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A484EFL7_BRELC3.660e-1334.65tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A1V9YI10_9STRA3.990e-1231.01tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A1W0A5Q3_9STRA2.290e-1128.77tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A067D5L9_SAPPC4.450e-1129.51tRNA-uridine aminocarboxypropyltransferase n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15627NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1coord: 34..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48811contigH-elongata_contig48811:47..2276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48811.12050.1mRNA_H-elongata_contig48811.12050.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48811 2..3957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48811.12050.1 ID=prot_H-elongata_contig48811.12050.1|Name=mRNA_H-elongata_contig48811.12050.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bp
MVLEDSDRSQPAYRRACCDIGLDYVISYLNCRDRWEGTRAVVSHPKIRGL
PHVRISQPPPRSRYWRWHSAGDGHICTAEATYLVLKDFERASGVTTEGGR
LEDLLFLFALMSSRIKDAYNTDPNKVGKELPVSEEAKQRRRMKAVRLNSL
VKPKYRGLNAVREAQGEAVAVEEFFRRRRGGRYCIAPPNYRRHIINTPDA
SEAWPQISTDECPRLRPNRLYSHERSCCRLMFIFTLSFSSLQRIRSYQFK
RKKACEPARRRSCCGRNQQWRARHMKMCRKWPRR*
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