prot_H-elongata_contig48770.12045.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48770.12045.1
Unique Nameprot_H-elongata_contig48770.12045.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length511
Homology
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BLAST of mRNA_H-elongata_contig48770.12045.1 vs. uniprot
Match: D8LI67_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI67_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 9.480e-92
Identity = 250/585 (42.74%), Postives = 299/585 (51.11%), Query Frame = 0 
Query:   10 VALPASTPLHSAAEAGDAAAVVVLIRNG-QAANSRAEWPNYENGATALHLAAQRGYLEVVLALLSAGAEPKGCETT-----------------------STDWDA------------DLXXXXXXXXXXXXXXXXXXXXXXERSDSVASGRKVGDLRVGSHGREV----------------FSEWDGGHTPLHLASAFGHVNVVRALVESGASVHARSGDNDDXXXXXXXXXXXXXXXXXXXXXXXXXDAGDNSGNTALHVAADASSTEFLLAAGANPNLVAQSPYGTCTPLGSYCALIHRLETTEEGVENATLQVKILLSNGADARLQASRND-----------SQGGKSPIISCAAKNGVPGILSALLGAGADPGERDQEGWAPLHDAARGDHVEVVRLLLRAGASIEARTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR----GYDPHDDAWLGYQPFDARR---LGVSKRS----------------GETPVEVIGLRHRAAA---PPVKGGS---ADSSQDEDEQMEVFDE----DTGEPDTGASARNAIRRALRREESWRRRRGVILFKASFDRQ 498
            VALP  T LH AA   DA  + +L+R G    NSR E PN + GATALHLAAQ+G+LE VLALL  GA P G ++T                       S +WD             DL                      E +D +ASGRKV D     HG                           TPLHLASA G    VRALV +GA VH R GD DDXXXXXXXXXXXXXXXXXXXXXXX  +AGD  GNT LHVA DA + EFLL+ GANPNLVA S YG  TPLGSYC LIHRLET + G+ NAT +V+ LL  GA   ++ +              +    SPI+SCAAKNGVPGI+SALLGAG DP ERD++GWAP+HDA +GDHV+V+RLLLRAGA  +A T                                      ++   +    ++P +       GV+                   G+TP EV+GL++ AAA   P   GGS   AD S DE             +TG+ +TG   RNAIRRALRRE +WRRRRG +L K   +RQ
Sbjct:   18 VALP--TELHKAAHRNDAGTITMLLRGGGMDPNSRVECPNCDEGATALHLAAQQGHLEAVLALLDGGARPGGRDSTDPGRPRSENNRVVSGSSSPSSSSSEEWDISDSDDVSEQEHDDLTPLHLACVGGHTAVVQALLSAGEPTDRLASGRKVSD-HAAVHGNNAAPXXXXXXXXXXXXXXXXXXXXXXTPLHLASACGAAGAVRALVGAGACVHRREGDCDDXXXXXXXXXXXXXXXXXXXXXXXDINAGDEIGNTPLHVARDAETLEFLLSRGANPNLVAMSRYGGGTPLGSYCTLIHRLETDDRGMRNATAKVEALLRYGASVHIRPTTAGDLSFLPHASPATVAAASPILSCAAKNGVPGIVSALLGAGLDPNERDRDGWAPIHDAVQGDHVDVLRLLLRAGAERDAPTRSGGWTPLHLACRYTSVECVVELLRWNASLGPAERPSSFNARAEGSAVHRPGNNETKPIFGVALEDYPPEXXXXXXXXXNGYGKTPAEVVGLKNLAAASTGPAGSGGSGHRADPSLDEXXXXXXXXXXXXXETGDRNTGVGERNAIRRALRREAAWRRRRGAVLVKVCLERQ 599
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BLAST of mRNA_H-elongata_contig48770.12045.1 vs. uniprot
Match: A0A7S3PSQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PSQ2_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.090e-5
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 0 
Query:  311 ILSALLGAGADPGERDQEGWAPLHDAARGDHVEVVRLLLRAGASIEAR 358
            +  AL+ AGAD    +Q+ W PLH AA   H E+VRLLL AGA I+AR
Sbjct:    1 VTEALISAGADVNASEQDNWTPLHHAASVGHPEIVRLLLIAGAEIDAR 48
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BLAST of mRNA_H-elongata_contig48770.12045.1 vs. uniprot
Match: A0A835EC50_9POAL (Uncharacterized protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835EC50_9POAL)

HSP 1 Score: 58.2 bits (139), Expect = 2.620e-5
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:  295 GKSPIISCAAKNGVPGILSALLGAGADPGERDQEGWAPLHDAARGDHVEVVRLLLRAGASIE 356
            G +P+IS AA  G    +  LL  GADP ++D EG+APLHDAA+G   E+ RLLL  GA ++
Sbjct:  154 GMTPLIS-AASEGQIAAVRYLLDKGADPNKQDHEGYAPLHDAAKGGFDEIARLLLSGGAIVD 214
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BLAST of mRNA_H-elongata_contig48770.12045.1 vs. uniprot
Match: A0A835FAW6_9POAL (Uncharacterized protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835FAW6_9POAL)

HSP 1 Score: 57.4 bits (137), Expect = 4.440e-5
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:  295 GKSPIISCAAKNGVPGILSALLGAGADPGERDQEGWAPLHDAARGDHVEVVRLLLRAGASIE 356
            G +P+IS AA  G    +  LL  GADP ++D EG+APLHDAA+G   E+ RLLL  GA ++
Sbjct:  225 GITPLIS-AASEGQIAAVRYLLDKGADPNKQDHEGYAPLHDAAKGGFDEIARLLLSGGAIVD 285
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BLAST of mRNA_H-elongata_contig48770.12045.1 vs. uniprot
Match: A0A3L6SBW0_PANMI (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6SBW0_PANMI)

HSP 1 Score: 57.0 bits (136), Expect = 4.450e-5
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 0 
Query:  295 GKSPIISCAAKNGVPGILSALLGAGADPGERDQEGWAPLHDAARGDHVEVVRLLLRAGASIE 356
            G +P+IS A   G    +  LL  GADP ++D EG+APLHDAA+G   E+ RLLL  GA ++
Sbjct:  132 GMTPLIS-AVSEGQVAAVRYLLDKGADPNKQDHEGYAPLHDAAKGGFDEIARLLLSGGAIVD 192
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48770.12045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LI67_ECTSI9.480e-9242.74Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
A0A7S3PSQ2_9STRA2.090e-554.17Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A835EC50_9POAL2.620e-550.00Uncharacterized protein n=1 Tax=Digitaria exilis T... [more]
A0A835FAW6_9POAL4.440e-550.00Uncharacterized protein n=1 Tax=Digitaria exilis T... [more]
A0A3L6SBW0_PANMI4.450e-548.39Uncharacterized protein n=1 Tax=Panicum miliaceum ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 344..358
score: 40.18
coord: 52..67
score: 46.7
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 13..42
e-value: 42.0
score: 13.0
coord: 51..80
e-value: 7.0E-4
score: 28.9
coord: 211..237
e-value: 4.3
score: 16.3
coord: 178..207
e-value: 5.4E-4
score: 29.3
coord: 144..173
e-value: 4.5E-6
score: 36.2
coord: 90..119
e-value: 0.056
score: 22.6
coord: 294..324
e-value: 200.0
score: 10.2
coord: 328..357
e-value: 5.7E-5
score: 32.5
coord: 362..391
e-value: 0.019
score: 24.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 90..122
score: 10.766
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 362..394
score: 10.82
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 144..176
score: 14.292
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 328..360
score: 13.277
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 13..45
score: 9.618
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 178..210
score: 13.384
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 51..83
score: 12.182
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 15..78
e-value: 1.1E-8
score: 35.5
coord: 89..174
e-value: 6.8E-11
score: 42.6
coord: 178..237
e-value: 3.7E-8
score: 33.8
coord: 303..390
e-value: 1.5E-14
score: 54.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 13..394
score: 72.05
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 129..258
e-value: 1.2E-29
score: 105.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 9..125
e-value: 1.6E-22
score: 81.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 259..401
e-value: 2.9E-29
score: 103.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 17..388
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 15..116
coord: 272..394
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 92..238
NoneNo IPR availablePANTHERPTHR24189:SF50coord: 15..116
coord: 272..394
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 146..290
NoneNo IPR availablePANTHERPTHR24189:SF50coord: 146..290
coord: 92..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48770contigH-elongata_contig48770:1970..3817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48770.12045.1mRNA_H-elongata_contig48770.12045.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48770 1970..3817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48770.12045.1 ID=prot_H-elongata_contig48770.12045.1|Name=mRNA_H-elongata_contig48770.12045.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=511bp
MACEKPPVAVALPASTPLHSAAEAGDAAAVVVLIRNGQAANSRAEWPNYE
NGATALHLAAQRGYLEVVLALLSAGAEPKGCETTSTDWDADLTPLHEASA
RGHVEVVRALLSAGERSDSVASGRKVGDLRVGSHGREVFSEWDGGHTPLH
LASAFGHVNVVRALVESGASVHARSGDNDDTPLHLAASGGRLGAMAVLVE
AGADVDAGDNSGNTALHVAADASSTEFLLAAGANPNLVAQSPYGTCTPLG
SYCALIHRLETTEEGVENATLQVKILLSNGADARLQASRNDSQGGKSPII
SCAAKNGVPGILSALLGAGADPGERDQEGWAPLHDAARGDHVEVVRLLLR
AGASIEARTVREGWTPLHVACRFTSVACVRELLKWGGDLSARGYDPHDDA
WLGYQPFDARRLGVSKRSGETPVEVIGLRHRAAAPPVKGGSADSSQDEDE
QMEVFDEDTGEPDTGASARNAIRRALRREESWRRRRGVILFKASFDRQFA
TASSPAEGAAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf