prot_H-elongata_contig48534.12012.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48534.12012.1
Unique Nameprot_H-elongata_contig48534.12012.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length311
Homology
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: A0A6H5JJZ7_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ7_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 2.140e-42
Identity = 133/352 (37.78%), Postives = 177/352 (50.28%), Query Frame = 0
Query:    1 QTLLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVPSGRVVSVLEGGYSLHPRVSRAKAAQQARANAKRATKPEVASARGFGPVGSSSSGP----------ALRERRNRPITRGKNA-----------------------------SSSAGCLPTTTATKTRPRPPLV--TPPSSDSFSSASLMKALPAASDLEATTSSNAFGSSEIRGAECFGGVASPSAMSMGNVIAAPARGVEGGGIPATTVHEEEHHVASIIAADHSAPAPADASAAETTPITGNRLAVPIGNPSSKASAEGRIGGIATQTEEEEFAMLRPEDGGLVRGVVSHVTALVMASGRKK 311
            +TLL+RLK+FSPDLLIISAGFDGHVEDYYHYLS+E+YEW+TLAL DC P+GRVVSVLEGGYSL  R+SRAKAAQQARAN KRA KPE A+                        ALRERRNRP TRG                                SSS G   T     ++    ++   P +  + +   L+ + PA S+  AT  +++   S+ R   CFG  +S ++  +G   A P   V G  +                                ++ + G      IG+ + K ++  ++  +A    E E A +R  DGGLVRGVVSHV+AL+  + R++
Sbjct:  689 RTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARMSRAKAAQQARANNKRAYKPETAAXXXXXXXXXXXXXXXXXXXXXXXXALRERRNRPATRGSXXXXXXXXXXXXXXXXXXXXXXXAASFPQPHSSSVGAPGTGNKADSKAAGAMLHTVPAAVPTAAGVPLLSSAPAGSNTIATMGASSLSPSDQRPGGCFGATSSGASSVVGEDPAVPVAVVCGASV--------------------------------SSGVGG------IGDGNRKKTSR-KVPVVAAAKGEGEDAAIRAWDGGLVRGVVSHVSALMTCASRQQ 1001          
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: D8LN83_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN83_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 2.970e-42
Identity = 138/336 (41.07%), Postives = 175/336 (52.08%), Query Frame = 0
Query:    1 QTLLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVPSGRVVSVLEGGYSLHPRVSRAKAAQQARANAKRATKPEVASARGFGPVGSSSSG---------PALRERRNRPITRGKNASSSAGCLPTTTATKT------------RPRPPLVTPPSS----DSFSSASLMKALPAASDLEATTSSNAFGSSEIRGAECFGGVASPSAMSMGNVIAAPARGVEGGGIPATTVHEEEHHVASIIAADHSAPAPADASAAETTPITGNRLAVPIGNPS-SKASAEGRIGGIATQTEEEEFAMLRPEDGGLVRGVVSHVTALVMASGRK 310
            +TLL+RLK+FSPDLLIISAGFDGHVEDYYHYLS+E+YEW+TLAL DC P+GRVVSVLEGGYSL  RVSRAKAAQQARAN KRA KPE A+                      PALRERRNRP TRG                              +P    V  P +    DS S+A+++  +PAA     T +     SS   G+     V + S          P+    GGG  AT         +S++  D + P            + G  ++  +G  +  KAS +  +   A + E E+ A +R  DGGLVRGVVSHV+AL+  + R+
Sbjct:  749 RTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQARANNKRANKPETAAXXXXXXXXXXXXXXXXXXXXXXPALRERRNRPATRGSXXXXXXXXXXXXXXXXXXXXXXXXXXFPPQPHSSSVGAPGAGNQADSKSAAAMLHTVPAA---VRTAAGAPLLSSAPAGSNTIAAVGASSLS--------PSDKPPGGGFGATG-----SGASSVVGEDPAVP---------VAVVCGPPVSSGVGGGNRKKASRKVPVAASAAKGEGEDAA-IRAWDGGLVRGVVSHVSALMTCASRQ 1058          
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: W7T8J0_9STRA (Histone deacetylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T8J0_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.940e-16
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    2 TLLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVP--SGRVVSVLEGGYSLHP 65
            TLL +LK F+PDLL ISAGFDGHVED+YHYL++E Y WIT  L       SG+V+SVLEGGY + P
Sbjct:  164 TLLPKLKAFAPDLLFISAGFDGHVEDHYHYLTEEDYAWITRELVAVAEGTSGKVISVLEGGYHVRP 229          
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: A0A4D9CVT0_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVT0_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 6.960e-15
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 0
Query:    3 LLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVP--SGRVVSVLEGGYSLHP 65
            LL +LK F+PDLL ISAGFDGHVED+YHYL++E Y WIT  L       SG+V+SVLEGGY + P
Sbjct:  762 LLPKLKAFAPDLLFISAGFDGHVEDHYHYLTEEDYAWITRELVAVAEGTSGKVISVLEGGYHVRP 826          
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: A0A067CKY5_SAPPC (Hist_deacetyl domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CKY5_SAPPC)

HSP 1 Score: 83.6 bits (205), Expect = 3.210e-14
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    1 QTLLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVPS---GRVVSVLEGGYSLHP 65
            + LL  L+ F+PDL++IS+GFDGHV+DYYH L++  YEWIT  L +   +   GR+VSVLEGGYSL P
Sbjct:  427 EILLPALRAFAPDLILISSGFDGHVDDYYHCLTEWDYEWITQRLVEIADNCCDGRIVSVLEGGYSLEP 494          
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: A0A7S2CKY7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CKY7_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.640e-14
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    3 LLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVP--SGRVVSVLEGGYSLHPRVS 68
            LL RL +F+PDLL ISAGFDGH +D+YHYLS+  Y W+T  L + +    G++VS+LEGGYSL P ++
Sbjct:  463 LLRRLDEFAPDLLFISAGFDGHYDDFYHYLSETDYGWLTDRLVEIMAPRGGKIVSILEGGYSLKPAIT 530          
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: T0R736_SAPDV (Hist_deacetyl domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R736_SAPDV)

HSP 1 Score: 82.8 bits (203), Expect = 6.030e-14
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    1 QTLLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVPS---GRVVSVLEGGYSLHP 65
            + LL  L+ F+PDL++IS+GFDGHV+DYYH L++  YEWIT  L +   +   GR+VSVLEGGYSL P
Sbjct:  450 EVLLPALRAFAPDLILISSGFDGHVDDYYHGLTEWDYEWITQRLVEIADNCCDGRIVSVLEGGYSLAP 517          
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: A0A836CER0_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 6.930e-14
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 0
Query:    1 QTLLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVPSG--RVVSVLEGGYSLHPR 66
            + LL RL  F+PD+L +SAGFDGH ED YH+ +++ Y W+T  L +C  +G  RVVSVLEGGYSL PR
Sbjct:  605 EALLPRLAAFAPDVLFVSAGFDGHHEDMYHWNTNDDYAWLTRRLMECAAAGGGRVVSVLEGGYSLAPR 672          
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: A0A1W0ABG1_9STRA (Histone deacetylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABG1_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 4.650e-13
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    3 LLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVPS---GRVVSVLEGGYSL 63
            L   L  F+PDL++ISAGFDGHV+DYYH+L++  YEWIT  L D       GR+VSVLEGGY+L
Sbjct:  424 LFPSLLAFNPDLILISAGFDGHVDDYYHFLTEWDYEWITEKLVDIADECCCGRIVSVLEGGYNL 487          
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Match: A0A3F2RKP9_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKP9_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.760e-12
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    3 LLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWIT----LALEDCVPSGRVVSVLEGGYSLHP 65
            L+  L KF PDL++ISAGFDGH +D+Y++L+++ Y WIT       EDC   GRVVSVLEGGY++ P
Sbjct:  493 LIPALTKFRPDLIMISAGFDGHADDFYYFLTEDDYSWITEQVTAVAEDCC-DGRVVSVLEGGYNVVP 558          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48534.12012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJZ7_9PHAE2.140e-4237.78Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
D8LN83_ECTSI2.970e-4241.07Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
W7T8J0_9STRA2.940e-1663.64Histone deacetylase n=1 Tax=Nannochloropsis gadita... [more]
A0A4D9CVT0_9STRA6.960e-1563.08Hist_deacetyl domain-containing protein n=1 Tax=Na... [more]
A0A067CKY5_SAPPC3.210e-1457.35Hist_deacetyl domain-containing protein n=1 Tax=Sa... [more]
A0A7S2CKY7_9STRA4.640e-1455.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
T0R736_SAPDV6.030e-1457.35Hist_deacetyl domain-containing protein n=1 Tax=Sa... [more]
A0A836CER0_9STRA6.930e-1457.35Histone deacetylase domain-containing protein n=1 ... [more]
A0A1W0ABG1_9STRA4.650e-1359.38Histone deacetylase n=1 Tax=Thraustotheca clavata ... [more]
A0A3F2RKP9_9STRA1.760e-1255.22Uncharacterized protein n=5 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 1..94
e-value: 7.1E-15
score: 56.7
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 3..71
e-value: 2.7E-11
score: 43.5
NoneNo IPR availablePANTHERPTHR45634:SF14coord: 3..76
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 3..76
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 3..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48534contigH-elongata_contig48534:552..3612 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48534.12012.1mRNA_H-elongata_contig48534.12012.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48534 552..3612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48534.12012.1 ID=prot_H-elongata_contig48534.12012.1|Name=mRNA_H-elongata_contig48534.12012.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=311bp
QTLLSRLKKFSPDLLIISAGFDGHVEDYYHYLSDEIYEWITLALEDCVPS
GRVVSVLEGGYSLHPRVSRAKAAQQARANAKRATKPEVASARGFGPVGSS
SSGPALRERRNRPITRGKNASSSAGCLPTTTATKTRPRPPLVTPPSSDSF
SSASLMKALPAASDLEATTSSNAFGSSEIRGAECFGGVASPSAMSMGNVI
AAPARGVEGGGIPATTVHEEEHHVASIIAADHSAPAPADASAAETTPITG
NRLAVPIGNPSSKASAEGRIGGIATQTEEEEFAMLRPEDGGLVRGVVSHV
TALVMASGRKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037138His_deacetylse_dom_sf
IPR023801His_deacetylse_dom
IPR023696Ureohydrolase_dom_sf