prot_H-elongata_contig48507.12009.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48507.12009.1
Unique Nameprot_H-elongata_contig48507.12009.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length292
Homology
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: D8LR94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR94_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 1.010e-130
Identity = 217/306 (70.92%), Postives = 241/306 (78.76%), Query Frame = 0
Query:    1 IAQALAALNAVYNGSGASHSEADRWLQEFQRSQEAWSISDTMLRLEGAELHVTFFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVGASAVITRLCLALSALALQVNWPDVVNDLSRRLMRVGSAEQHNHAARVLLEFMKVDGGGRGRIV---FHLNQNNIISQLISEVNCGGNPVLGRIKSYLLP-----------HLLPEEAVNHRIVVPEATRKAFLYQLCASSGFLLSSLEQIASGPLGAEVMVQETVFQCLQSWVRHVDVPGDELARNPLLPAAFDALEKQELFETAVDFLVEV 292
            +A+ALAALNAVYNGSG SH EADRWLQEFQRSQEAWS++D MLR+E AEL+VTFFAAQTIHAKIRSNFRELPQESIP+LRDSL+DH+ RW G G SAVITRLCLALS LALQ+NWPDV+ DL+ RLMR GS EQ   AARVLLEFMK  G GR   V    H+    I  +L  +V    +    R +SYL              +LPEEAVNHRIVVPEAT+ AFL QLC SSGFLL+SLEQIA+GPLGAE+MVQETVFQCLQSWVRHV+VPGDE+ RNPLL AAFDAL  QELFETAVD LVEV
Sbjct:   12 VAEALAALNAVYNGSGPSHKEADRWLQEFQRSQEAWSVADAMLRMESAELNVTFFAAQTIHAKIRSNFRELPQESIPSLRDSLVDHLERWGGAGKSAVITRLCLALSGLALQLNWPDVLRDLTGRLMRAGSVEQQKQAARVLLEFMKEAGAGRPSYVHRALHVTCRYIWVRLGDDVVSRSS----RQQSYLRSTAASVLVLDECQVLPEEAVNHRIVVPEATQVAFLQQLCESSGFLLTSLEQIAAGPLGAEIMVQETVFQCLQSWVRHVNVPGDEVVRNPLLSAAFDALGNQELFETAVDLLVEV 313          
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: A0A835Z666_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z666_9STRA)

HSP 1 Score: 246 bits (627), Expect = 3.550e-71
Identity = 132/288 (45.83%), Postives = 173/288 (60.07%), Query Frame = 0
Query:    7 ALNAVYNGSGASHSEADRWLQEFQRSQEAWSISDTMLRLEGAELHVTFFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVG--ASAVITRLCLALSALALQVNWPDVVNDLSRRLMRVGSAEQHNHAARVLLEFMKVDGGGRGRIVFHLNQNNIISQLISEVNCGGNPVLGRIKSYLLPHLLPEEAVNHRIVVPEATRKAFLYQLCASSGFLLSSLEQIASGPLGAEVMVQETVFQCLQSWVRHVDVPGDELARNPLLPAAFDALEKQELFETAVDFLVEV 292
            AL+ VYNGSGA H +AD+WLQ+FQ++ EAW ++D++L +  AEL VTFF A TIH+KIR +F ELP  ++P+L+ SL  H+ RWA       AV+TRLCLAL+ALA+Q NW   V +LS  +M+    +Q   AARV+LE MKV                                            LPEE  N  + V +  R+AF   L AS+  LL  L ++A+GPLG +VMVQET+FQCLQSWVR+  +P  +LA +PL PAAFDAL   +LFE A D LV+V
Sbjct:   11 ALDLVYNGSGADHRKADKWLQQFQQTAEAWQVADSLLMMPDAELQVTFFGAMTIHSKIRFDFHELPSATLPSLKSSLTAHLTRWATAKDLRPAVVTRLCLALAALAVQTNWTGAVQELSSAIMQSAPRDQQGRAARVVLELMKV--------------------------------------------LPEECCNKNVAVADDLREAFRQHLDASAPLLLGFLSEVAAGPLGQDVMVQETIFQCLQSWVRYTSIPPADLAAHPLFPAAFDALRTPDLFEAAADLLVQV 254          
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: A0A261XZ23_9FUNG (Importin N-terminal domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XZ23_9FUNG)

HSP 1 Score: 103 bits (257), Expect = 5.200e-21
Identity = 85/306 (27.78%), Postives = 138/306 (45.10%), Query Frame = 0
Query:    2 AQALAALNAVYNGSGASHSE-ADRWLQEFQRSQEAWSISDTMLRLEGAELHVTFFAAQTIHAK------------IRSNFRELPQESIPALRDSLIDHILRWAGVGASAVITRLCLALSALALQ-VNWPDVVNDLSRRLMRVGSAEQHNHAARVLLEFMKVDGGGRGRIVFHLNQNNIISQLISEVNCGGNPVLGRIKSYLLPHLLPEEA-VNHRIVVPEATRKAFLYQLCASSGFLLSSLEQIASGPLGAEVMVQETVFQCLQSWVRHVDVPGDELARNPLLPAAFDALEKQELFETAVDFLVEV 292
            AQ + AL A+Y  +  +H E A +WL+EFQ+S EAW+ +D +L+    +     FAAQT+  K            I  + ++L + +  +LRDSL+  + ++A  G   V+T+LCL ++ LALQ  +W +V+ D+      V    +    A  LLEF+ +                                            LPEE   + RI + +   +    +L  ++   +  +  +     G    +Q  VF CL SW+R  D+  ++LA NPLLP  F +L    LF+ AVD + E+
Sbjct:    4 AQMVKALEALYGSADKAHREQAGKWLEEFQKSPEAWTTADLLLKQRDTQQEAKLFAAQTLRQKASRMATGSLIAMIIYDLQDLDETARTSLRDSLLALLSQYA-TGPKLVVTQLCLGIADLALQFTSWQNVLTDM------VNLYGKTPETAICLLEFLTI--------------------------------------------LPEEINASSRIPMSDDVYQQRSSELLTNNSDAVLKMLVMYMQTAGHSTDLQAKVFSCLLSWLRTGDLDVNDLAANPLLPLTFQSLAVPALFDVAVDVICEI 258          
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: D8TW05_VOLCA (Importin N-terminal domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TW05_VOLCA)

HSP 1 Score: 91.7 bits (226), Expect = 1.150e-19
Identity = 47/108 (43.52%), Postives = 75/108 (69.44%), Query Frame = 0
Query:    7 ALNAVYNGSGAS-HSEADRWLQEFQRSQEAWSISDTMLRLEGAELHVTFFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVGASAVITRLCLALSALALQV 113
            ALNA+Y+        EADRWL+++Q+S EAWS++D +L    + +   +F AQT+  K++ +F ELP +++ +LRDSL+  ++R++  GA  V T+LCLAL+ALA+ V
Sbjct:    1 ALNALYHHDDPKVKDEADRWLEQWQQSLEAWSVADGVLHDPNSSMEAQYFCAQTLRTKVQRDFEELPSDAVDSLRDSLLQLLIRFSK-GAPPVRTQLCLALAALAVHV 107          
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: A0A2K3E212_CHLRE (Importin N-terminal domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E212_CHLRE)

HSP 1 Score: 99.4 bits (246), Expect = 1.400e-19
Identity = 91/316 (28.80%), Postives = 145/316 (45.89%), Query Frame = 0
Query:    3 QALAALNAVYNGSGAS-HSEADRWLQEFQRSQEAWSISDTMLRLEGAELHVTFFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVGASAVITRLCLALSALALQV---NWPDVVNDLSRRLMRVGSAEQHNHAARVLLEFMKVDGGGRGRIVFHLNQNNIISQLISEVNCGGNPVLGRIKSYL-LPHLLPEEAVNHRIVVPEATRKAFLYQLCASSGFLLSSLEQIASGPLGAEVMVQETVFQCLQSWVRHVD----------------VPGDE----LARNPLLPAAFDALEKQ-ELFETAVDFLVEV 292
            Q LAAL A+Y+        EADRWL+++Q+S EAWS++D +L      +   +F AQT+  K++ +F ELP E++ +LR+SL+  ++R++  GA  V T+LCL L+ALA+ V    W          L   GS+                 G              ++    ++   G  P    +   L L  +LP+E  +++I V    R++F  +L A++G     L    S P G     Q  V +   SW++  +                  G++    LAR+PL+ AA + L+   E F  AVD + EV
Sbjct:    5 QLLAALQALYHHDDPKVKDEADRWLEQWQQSVEAWSVADAVLHDPTTSMEAQYFCAQTLRTKVQRDFEELPPEAVDSLRESLLQLLIRFSK-GAPPVRTQLCLGLAALAVHVPVDRWT---------LPAPGSSXXXXXXXXXXXXXXXXAG--------------VVRWFAAKF--GALPPDTALPCMLELLTVLPQEVHSYKIAVRPERRRSFAAELMANTGAAFDILSSCLSQP-GERTRTQ--VLEAFGSWLKLNEGRPLPSIAAAVAAGAVAAGEDAAATLARHPLVAAALEGLQNTGETFHAAVDAICEV 291          
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: A0A7S4D915_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D915_HETAK)

HSP 1 Score: 91.3 bits (225), Expect = 1.400e-19
Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 0
Query:   17 ASHSEADRWLQEFQRSQEAWSISDTMLRLEGAELHVTFFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVGAS 96
            A   EADRWLQEFQ+S EAW ++D +L    A     FFAAQT+HAK++ +F ELP E++ ALR SL+DH+ R A  GA+
Sbjct:   19 AQRKEADRWLQEFQKSSEAWQVADALLGAADAPAAARFFAAQTLHAKLQYDFHELPAEAVGALRRSLLDHLKRAAAAGAA 98          
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: A0A383V7P9_TETOB (Importin N-terminal domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V7P9_TETOB)

HSP 1 Score: 99.0 bits (245), Expect = 1.870e-19
Identity = 59/150 (39.33%), Postives = 91/150 (60.67%), Query Frame = 0
Query:    3 QALAALNAVYNGSGAS-HSEADRWLQEFQRSQEAWSISDTMLRLEGAELHVTFFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVGASAVITRLCLALSALALQV---NWPDVVNDLSRRLMRVGSAEQHNHAARVLLEFMKV 148
            Q +AA+ A+Y    A+  SEADRWL+ +Q S EAW++++ +L    +    T+F AQT+  K++ ++ ELP ES+P LRDSL+  +LR+ G G+ AV T+LCLA++ALA  +    W +    + R LM   S +    A   +LE + V
Sbjct:    4 QVVAAITALYGSDDAAVRSEADRWLERWQSSSEAWTVANAILHNPSSGAEYTYFCAQTLKTKVQRDYEELPAESVPQLRDSLLQLLLRF-GHGSPAVRTQLCLAMAALAAHLPAAQWSE--GGVLRWLMERFSGQDPAVAMSCMLELLTV 150          
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: B8BVT4_THAPS (Xpo1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT4_THAPS)

HSP 1 Score: 99.0 bits (245), Expect = 1.880e-19
Identity = 94/303 (31.02%), Postives = 133/303 (43.89%), Query Frame = 0
Query:   22 ADRWLQEFQRSQEAWSISDTMLRL------------EGAELHVT--FFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVGASA----------VITRLCLALSALALQVNWPDVVNDLSRRLMRVGSAEQHNHAARVLLEFMKV-DGGGRGRIVFHLNQNNIISQLISEVNCGGNPVLGRIKSYLLPHLLPEEAVNHRIVVPEATRKAFLYQLCASSGFLLSSLEQIASGPLGAEVMVQ-----ETVFQCLQSWVRHVDVPGDELARNPLLPAAFDALEKQEL--FETAVDFLVEV 292
            ADR+L  FQR+  AW + D +L              E + L     FFAAQT+HAK RS+  +LP  S+P+LR SL+ H +  A     A          ++TRL +A+++LA+Q++W  ++ND+S  ++             VL  F  + +     R+V    ++    + +    C    VLG          L E AV       EA  +        S G         AS P G  +  Q     E V  CLQSW+R VD+P   L +  LLP  FD L       FE AVD LVE+
Sbjct:   92 ADRYLTSFQRTAVAWIVCDRLLSTADIATPSATTTSEDSTLRTQRQFFAAQTLHAKCRSDVHQLPPSSLPSLRTSLLSHFVHHASDSVRASVENRPPNRPLVTRLAMAIASLAVQMSWYSILNDVSSTVL----TPNPELGPAVLELFRSIPEEADSTRLVMQNEEDLWHYRDVLRRECA--VVLG----------LCEHAVR---ASHEACHRGHRDNNINSGG---------ASFPPGVVMQTQDVATTEAVLSCLQSWIRIVDMPPSLLEKTVLLPWMFDLLTDSTNGGFEMAVDVLVEM 366          
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: A0A162Y2H9_PHYB8 (Importin N-terminal domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162Y2H9_PHYB8)

HSP 1 Score: 97.8 bits (242), Expect = 4.450e-19
Identity = 58/150 (38.67%), Postives = 95/150 (63.33%), Query Frame = 0
Query:    1 IAQALAALNAVYNGSGA-SHSEADRWLQEFQRSQEAWSISDTMLRLEGAELHVTFFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVGASAVITRLCLALSALALQ-VNWPDVVNDLSRRLMRVGSAEQHNHAARVLLEFMKV 148
            ++Q L AL+A+Y+ S + +  EA RWL++FQ+  EAW++++ +L +E +      FAAQT+  KI  + REL  E+  +LRDSL+  +L  +  G+ A++ +LCLA++ LA+Q + W  VV DL   + + G   +   +A  LLEF+KV
Sbjct:    6 VSQVLEALSALYSSSNSQAKKEASRWLEDFQKQPEAWTVANYLLTMENSNTETRLFAAQTLRQKITYDLRELNPEARRSLRDSLV-QLLWVSATGSKAIMVQLCLAVADLAIQFMEWNTVVQDL---IAKFGKTPE---SATCLLEFLKV 148          
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Match: A0A0L6VEM2_9BASI (Importin N-terminal domain-containing protein n=1 Tax=Puccinia sorghi TaxID=27349 RepID=A0A0L6VEM2_9BASI)

HSP 1 Score: 97.4 bits (241), Expect = 6.050e-19
Identity = 83/288 (28.82%), Postives = 133/288 (46.18%), Query Frame = 0
Query:    8 LNAVYNGSGAS-HSEADRWLQEFQRSQEAWSISDTMLRLEGAELHVTFFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVGASAVITRLCLALSALALQV-NWPDVVNDLSRRLMRVGSAEQHNHAARVLLEFMKVDGGGRGRIVFHLNQNNIISQLISEVNCGGNPVLGRIKSYLLPHLLPEEAVNHRIVVPEATRKAF-LYQLCASSGFLLSSLEQIASGPLGAEVMVQETVFQCLQSWVRHVDVPGDELARNPLLPAAFDALEKQELFETAVDFLVEV 292
            L+A+Y    A+  S A++WLQ FQ++++AW  SD +L+ + A +    FAAQT  AKI  +  +LP+     LRDSL+  + + + + +  ++ +LCL+L+ LALQ+  WP V+ DL  +    G   Q      +LLEF+ V                   ++I      GN  +       L +    + + H   +   T K+  L Q+     FL+          L           +C  SW+R  ++         +L  AF ALE   LFETAVDF+V++
Sbjct:   12 LSALYTNPDATIKSNANQWLQSFQKTEQAWITSDLILKSQEAPIECKLFAAQTFRAKITFDLDQLPEPDRLQLRDSLLAALTQDSIISSKIILVQLCLSLADLALQLPQWPTVIADLVEKF---GKEPQ---TVPILLEFLTV----------------FPQEII------GNSKIKITHLDTLDYHPSTDQLFHSSRINGVTLKSLSLSQIPCP--FLIXXXXXXXXXXL-------TPFLECTSSWLRAGEIQTSSAGSQFILRCAFSALEDDSLFETAVDFIVDL 262          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48507.12009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR94_ECTSI1.010e-13070.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z666_9STRA3.550e-7145.83Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A261XZ23_9FUNG5.200e-2127.78Importin N-terminal domain-containing protein n=1 ... [more]
D8TW05_VOLCA1.150e-1943.52Importin N-terminal domain-containing protein (Fra... [more]
A0A2K3E212_CHLRE1.400e-1928.80Importin N-terminal domain-containing protein n=4 ... [more]
A0A7S4D915_HETAK1.400e-1953.75Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A383V7P9_TETOB1.870e-1939.33Importin N-terminal domain-containing protein n=2 ... [more]
B8BVT4_THAPS1.880e-1931.02Xpo1 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A162Y2H9_PHYB84.450e-1938.67Importin N-terminal domain-containing protein n=1 ... [more]
A0A0L6VEM2_9BASI6.050e-1928.82Importin N-terminal domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001494Importin-beta, N-terminal domainPFAMPF03810IBN_Ncoord: 22..88
e-value: 4.9E-5
score: 23.2
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 157..292
e-value: 3.1E-17
score: 63.9
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..148
e-value: 1.0E-40
score: 141.7
IPR013598Exportin-1/Importin-beta-likePFAMPF08389Xpo1coord: 192..289
e-value: 1.5E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR12363:SF33IMPORTIN-13coord: 3..292
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 3..292
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48507contigH-elongata_contig48507:709..3901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48507.12009.1mRNA_H-elongata_contig48507.12009.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48507 709..3901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48507.12009.1 ID=prot_H-elongata_contig48507.12009.1|Name=mRNA_H-elongata_contig48507.12009.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bp
IAQALAALNAVYNGSGASHSEADRWLQEFQRSQEAWSISDTMLRLEGAEL
HVTFFAAQTIHAKIRSNFRELPQESIPALRDSLIDHILRWAGVGASAVIT
RLCLALSALALQVNWPDVVNDLSRRLMRVGSAEQHNHAARVLLEFMKVDG
GGRGRIVFHLNQNNIISQLISEVNCGGNPVLGRIKSYLLPHLLPEEAVNH
RIVVPEATRKAFLYQLCASSGFLLSSLEQIASGPLGAEVMVQETVFQCLQ
SWVRHVDVPGDELARNPLLPAAFDALEKQELFETAVDFLVEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001494Importin-beta_N
IPR011989ARM-like
IPR013598Exportin-1/Importin-b-like
IPR016024ARM-type_fold