prot_H-elongata_contig48377.11989.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48377.11989.1
Unique Nameprot_H-elongata_contig48377.11989.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: D7FP33_ECTSI (E3 ubiquitin-protein ligase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP33_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 3.630e-7
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0
Query:   19 SDQRLPPGWVVRIDDQGRTYYMNTILKATQWQRPTQRVPSNRRISV---QAVDTPAARS 74
            S   LPPGW+ R DD G+TY+ +T+ K TQW+RPTQ  P +  +S    + +D P A +
Sbjct:  462 SGDPLPPGWISRTDDSGKTYFQDTVSKTTQWERPTQH-PRSSSVSSGRPEVIDMPMAHT 519          
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: A0A1B6CLZ1_9HEMI (E3 ubiquitin-protein ligase n=4 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6CLZ1_9HEMI)

HSP 1 Score: 52.0 bits (123), Expect = 8.360e-6
Identity = 25/56 (44.64%), Postives = 31/56 (55.36%), Query Frame = 0
Query:   23 LPPGWVVRIDDQGRTYYMNTILKATQWQRPTQRVPSNRRISVQAVDTPAARSHESF 78
            LP GW  R D  GRTYY+N ILK T W+RPT    +    + Q +D+ A   H  F
Sbjct:  221 LPRGWEERQDANGRTYYVNHILKTTHWERPTISNTAENGTNSQNIDSAATEFHRRF 276          
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: A0A182JCA4_9DIPT (2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182JCA4_9DIPT)

HSP 1 Score: 50.4 bits (119), Expect = 2.900e-5
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    1 PLVRSHRAYDEKVNIPDESDQRLPPGWVVRIDDQGRTYYMNTILKATQWQRPT 53
            P+      Y ++   P+     LPPGW VR D  GRTYY+N + + TQW+RP+
Sbjct:  222 PVHHPQHHYHQRQQQPEP----LPPGWEVRQDPVGRTYYVNHVARTTQWERPS 270          
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: A0A182ITS4_9DIPT (HECT-type E3 ubiquitin transferase n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182ITS4_9DIPT)

HSP 1 Score: 50.4 bits (119), Expect = 2.950e-5
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    1 PLVRSHRAYDEKVNIPDESDQRLPPGWVVRIDDQGRTYYMNTILKATQWQRPT 53
            P+      Y ++   P+     LPPGW VR D  GRTYY+N + + TQW+RP+
Sbjct:  222 PVHHPQHHYHQRQQQPEP----LPPGWEVRQDPVGRTYYVNHVARTTQWERPS 270          
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: A0A084WSZ0_ANOSI (HECT-type E3 ubiquitin transferase n=1 Tax=Anopheles sinensis TaxID=74873 RepID=A0A084WSZ0_ANOSI)

HSP 1 Score: 50.4 bits (119), Expect = 2.950e-5
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    1 PLVRSHRAYDEKVNIPDESDQRLPPGWVVRIDDQGRTYYMNTILKATQWQRPT 53
            P+      Y ++   P+     LPPGW VR D  GRTYY+N + + TQW+RP+
Sbjct:  266 PVHHPQHHYHQRQQQPEP----LPPGWEVRQDPVGRTYYVNHVARTTQWERPS 314          
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: A0A2M4CJ69_ANODA (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CJ69_ANODA)

HSP 1 Score: 50.1 bits (118), Expect = 3.990e-5
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0
Query:   23 LPPGWVVRIDDQGRTYYMNTILKATQWQRPT 53
            LPPGW VR D  GRTYY+N I + TQW+RP+
Sbjct:  299 LPPGWEVRQDPVGRTYYVNHIARTTQWERPS 329          
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: A0A2M3Z473_9DIPT (HECT-type E3 ubiquitin transferase (Fragment) n=8 Tax=Nyssorhynchus TaxID=44543 RepID=A0A2M3Z473_9DIPT)

HSP 1 Score: 50.1 bits (118), Expect = 4.010e-5
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0
Query:   23 LPPGWVVRIDDQGRTYYMNTILKATQWQRPT 53
            LPPGW VR D  GRTYY+N I + TQW+RP+
Sbjct:   83 LPPGWEVRQDPVGRTYYVNHIARTTQWERPS 113          
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: A0A2M4CMV3_ANODA (HECT-type E3 ubiquitin transferase (Fragment) n=2 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CMV3_ANODA)

HSP 1 Score: 50.1 bits (118), Expect = 4.020e-5
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0
Query:   23 LPPGWVVRIDDQGRTYYMNTILKATQWQRPT 53
            LPPGW VR D  GRTYY+N I + TQW+RP+
Sbjct:  144 LPPGWEVRQDPVGRTYYVNHIARTTQWERPS 174          
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: A0A7M7KUP3_VARDE (HECT-type E3 ubiquitin transferase n=3 Tax=Varroa TaxID=62624 RepID=A0A7M7KUP3_VARDE)

HSP 1 Score: 50.1 bits (118), Expect = 4.040e-5
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0
Query:   23 LPPGWVVRIDDQGRTYYMNTILKATQWQRPT 53
            LPPGW  R+D  GR YY+N IL+ TQW+RPT
Sbjct:  335 LPPGWEERMDANGRNYYVNHILRYTQWRRPT 365          
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Match: A0A183N9D5_9TREM (Uncharacterized protein n=2 Tax=Schistosoma TaxID=6181 RepID=A0A183N9D5_9TREM)

HSP 1 Score: 49.7 bits (117), Expect = 4.930e-5
Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 0
Query:   20 DQRLPPGWVVRIDDQGRTYYMNTILKATQWQRPT 53
            +  LPPGW  R+D  GRTYYM+ + K TQW RP+
Sbjct:  265 ENSLPPGWDERVDQNGRTYYMDHVNKRTQWDRPS 298          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48377.11989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FP33_ECTSI3.630e-744.07E3 ubiquitin-protein ligase, putative n=1 Tax=Ecto... [more]
A0A1B6CLZ1_9HEMI8.360e-644.64E3 ubiquitin-protein ligase n=4 Tax=Clastoptera ar... [more]
A0A182JCA4_9DIPT2.900e-541.512-oxoisovalerate dehydrogenase subunit alpha n=1 T... [more]
A0A182ITS4_9DIPT2.950e-541.51HECT-type E3 ubiquitin transferase n=1 Tax=Anophel... [more]
A0A084WSZ0_ANOSI2.950e-541.51HECT-type E3 ubiquitin transferase n=1 Tax=Anophel... [more]
A0A2M4CJ69_ANODA3.990e-564.52HECT-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A2M3Z473_9DIPT4.010e-564.52HECT-type E3 ubiquitin transferase (Fragment) n=8 ... [more]
A0A2M4CMV3_ANODA4.020e-564.52HECT-type E3 ubiquitin transferase (Fragment) n=2 ... [more]
A0A7M7KUP3_VARDE4.040e-564.52HECT-type E3 ubiquitin transferase n=3 Tax=Varroa ... [more]
A0A183N9D5_9TREM4.930e-555.88Uncharacterized protein n=2 Tax=Schistosoma TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 22..54
e-value: 3.5E-10
score: 49.8
IPR001202WW domainPFAMPF00397WWcoord: 23..52
e-value: 6.2E-11
score: 42.2
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 27..52
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 21..54
score: 15.368
NoneNo IPR availableGENE3D2.20.70.10coord: 19..79
e-value: 2.1E-13
score: 51.8
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 18..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48377contigH-elongata_contig48377:402..1506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48377.11989.1mRNA_H-elongata_contig48377.11989.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48377 402..1506 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48377.11989.1 ID=prot_H-elongata_contig48377.11989.1|Name=mRNA_H-elongata_contig48377.11989.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
PLVRSHRAYDEKVNIPDESDQRLPPGWVVRIDDQGRTYYMNTILKATQWQ
RPTQRVPSNRRISVQAVDTPAARSHESFAPPFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf