prot_H-elongata_contig48333.11982.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48333.11982.1
Unique Nameprot_H-elongata_contig48333.11982.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length36
Homology
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: D8LKZ6_ECTSI (Endo/excinuclease amino terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ6_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.990e-14
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 KFFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            KFFHCYLLQSQDP+H RSTYIGFTVDP RRIRQH
Sbjct:    9 KFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQH 42          
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: A0A7S1YNL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YNL2_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.780e-9
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 KFFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            K FHCYLL+S +P HP  TYIGFT +PSRRIRQH
Sbjct:   22 KHFHCYLLRSLNPDHPLKTYIGFTTNPSRRIRQH 55          
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: A0A1J7GC68_LUPAN (Structure-specific endonuclease subunit SLX1 homolog n=6 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A1J7GC68_LUPAN)

HSP 1 Score: 59.3 bits (142), Expect = 2.960e-9
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    2 FFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            FF CYLL S +PRH RSTYIGFTV+P RRIRQH
Sbjct:   58 FFACYLLTSLNPRHKRSTYIGFTVNPRRRIRQH 90          
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: A0A6A4NQ54_LUPAL (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4NQ54_LUPAL)

HSP 1 Score: 59.3 bits (142), Expect = 2.970e-9
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    2 FFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            FF CYLL S +PRH RSTYIGFTV+P RRIRQH
Sbjct:   85 FFACYLLTSLNPRHKRSTYIGFTVNPRRRIRQH 117          
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: A0A7S0C8U8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8U8_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.930e-9
Identity = 21/31 (67.74%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    4 HCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            HCYLL+S  P+HPR+TY+G+T DP RR+RQH
Sbjct:   48 HCYLLRSTSPKHPRTTYVGYTCDPKRRLRQH 78          
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: K0SR11_THAOC (GIY-YIG domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SR11_THAOC)

HSP 1 Score: 58.2 bits (139), Expect = 7.560e-9
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    1 KFFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            K +HCYLL+S DP HP  TYIGFT +P RR+RQH
Sbjct:  184 KHYHCYLLRSLDPGHPLKTYIGFTTNPERRLRQH 217          
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: UPI00098DF1E5 (structure-specific endonuclease subunit SLX1 homolog 2-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098DF1E5)

HSP 1 Score: 57.4 bits (137), Expect = 1.410e-8
Identity = 25/33 (75.76%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    2 FFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            FF CYLL SQ PRH   TYIGFTV+P RRIRQH
Sbjct:   57 FFACYLLSSQSPRHKGRTYIGFTVNPRRRIRQH 89          
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: UPI001C35EDEC (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C35EDEC)

HSP 1 Score: 54.7 bits (130), Expect = 1.730e-8
Identity = 24/34 (70.59%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    1 KFFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            +FF CYLL S  PRH   TYIGFTV+P RRIRQH
Sbjct:   35 RFFACYLLVSLSPRHKGHTYIGFTVNPRRRIRQH 68          
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: A0A8J2SCH5_9STRA (Structure-specific endonuclease subunit SLX1 homolog n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCH5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.870e-8
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    2 FFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            F  CYLL+S DP HPRS+YIGFTV+P RR+RQH
Sbjct:   30 FCGCYLLRSCDPAHPRSSYIGFTVNPLRRVRQH 62          
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Match: A0A1J7IIT6_LUPAN (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A1J7IIT6_LUPAN)

HSP 1 Score: 57.0 bits (136), Expect = 1.930e-8
Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    2 FFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQH 34
            FF CYLL S +P H RSTYIGFTV+P RRIRQH
Sbjct:   47 FFACYLLTSLNPSHKRSTYIGFTVNPRRRIRQH 79          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48333.11982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKZ6_ECTSI2.990e-1491.18Endo/excinuclease amino terminal domain-containing... [more]
A0A7S1YNL2_9STRA1.780e-973.53Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A1J7GC68_LUPAN2.960e-978.79Structure-specific endonuclease subunit SLX1 homol... [more]
A0A6A4NQ54_LUPAL2.970e-978.79Structure-specific endonuclease subunit SLX1 homol... [more]
A0A7S0C8U8_9STRA5.930e-967.74Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
K0SR11_THAOC7.560e-967.65GIY-YIG domain-containing protein n=1 Tax=Thalassi... [more]
UPI00098DF1E51.410e-875.76structure-specific endonuclease subunit SLX1 homol... [more]
UPI001C35EDEC1.730e-870.59Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A8J2SCH5_9STRA1.870e-872.73Structure-specific endonuclease subunit SLX1 homol... [more]
A0A1J7IIT6_LUPAN1.930e-875.76Structure-specific endonuclease subunit SLX1 homol... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035901GIY-YIG endonuclease superfamilyGENE3D3.40.1440.10coord: 1..35
e-value: 6.1E-6
score: 27.9
NoneNo IPR availablePANTHERPTHR20208FAMILY NOT NAMEDcoord: 1..34
IPR000305GIY-YIG endonucleasePROSITEPS50164GIY_YIGcoord: 1..35
score: 12.027

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48333contigH-elongata_contig48333:451..558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48333.11982.1mRNA_H-elongata_contig48333.11982.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48333 451..558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48333.11982.1 ID=prot_H-elongata_contig48333.11982.1|Name=mRNA_H-elongata_contig48333.11982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=36bp
KFFHCYLLQSQDPRHPRSTYIGFTVDPSRRIRQHK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035901GIY-YIG_endonuc_sf
IPR000305GIY-YIG_endonuc