prot_H-elongata_contig48227.11971.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48227.11971.1
Unique Nameprot_H-elongata_contig48227.11971.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: D8LTG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTG6_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 4.390e-40
Identity = 76/95 (80.00%), Postives = 79/95 (83.16%), Query Frame = 0
Query:   19 SVGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 113
            +VG+ GSDKRTRN+LPNGFYKFLVHNVKELELLLMHNR               KYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA
Sbjct:   58 NVGY-GSDKRTRNILPNGFYKFLVHNVKELELLLMHNR---------------KYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 136          
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: A0A835YGQ7_9STRA (Ribosomal protein L32e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGQ7_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.010e-32
Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 0
Query:   19 SVGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 113
            ++G+ GS+K+TRN+LPNGFYKFLVHNVK+LELL+MHNR               KYAAEIAHNVS+RKRKEIVERA QL I+VTNA A+L  EEDA
Sbjct:   58 NIGY-GSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNR---------------KYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136          
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: A0A7S2XAB1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XAB1_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 1.780e-31
Identity = 64/95 (67.37%), Postives = 73/95 (76.84%), Query Frame = 0
Query:   18 SSVGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEED 112
            ++VG+ GS+K+TRNLLPNGFYKFLVHNVKELELL+MHNR               KY AE+AH VSS+KRKEIVERA QL I+VTNA AKL AEED
Sbjct:   41 ANVGY-GSNKKTRNLLPNGFYKFLVHNVKELELLMMHNR---------------KYCAEVAHAVSSKKRKEIVERADQLGIKVTNANAKLRAEED 119          
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: A0A7S0L5M3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5M3_9EUKA)

HSP 1 Score: 111 bits (277), Expect = 5.150e-29
Identity = 62/95 (65.26%), Postives = 70/95 (73.68%), Query Frame = 0
Query:   19 SVGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 113
            S+G+ GSDK TRNLLPNGFYKFLVHN KELE+L+MHNR               KY AEIAHNVSS+ RK IVERA QL+I+VTNA AKL  EE+A
Sbjct:   69 SIGY-GSDKATRNLLPNGFYKFLVHNPKELEMLMMHNR---------------KYCAEIAHNVSSKTRKVIVERANQLNIKVTNAIAKLRVEENA 147          
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: A0A7S1UMM3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMM3_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.860e-29
Identity = 61/98 (62.24%), Postives = 71/98 (72.45%), Query Frame = 0
Query:   16 VRSSVGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 113
            V   VG+ GSDK+TRN+LPNGFYKFLVHNV ELELL+MHN+                Y AEIA  VS+RKRKEIVERA QL I+VTNA AKL+AE++A
Sbjct:   46 VEVKVGY-GSDKKTRNMLPNGFYKFLVHNVNELELLMMHNKT---------------YCAEIAKGVSARKRKEIVERAEQLAIKVTNASAKLAAEDEA 127          
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: A0A6U4LKX9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4LKX9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 7.580e-29
Identity = 61/98 (62.24%), Postives = 71/98 (72.45%), Query Frame = 0
Query:   16 VRSSVGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 113
            V   VG+ GSDK+TRN+LPNGFYKFLVHNV ELELL+MHN+                Y AEIA  VS+RKRKEIVERA QL I+VTNA AKL+AE++A
Sbjct:   55 VEVKVGY-GSDKKTRNMLPNGFYKFLVHNVNELELLMMHNKT---------------YCAEIAKGVSARKRKEIVERAEQLAIKVTNASAKLAAEDEA 136          
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: W7T4V3_9STRA (Ribosomal protein l32 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4V3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.110e-28
Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 0
Query:   19 SVGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 113
            ++G+ GSD +TRNLLPNGFYKF+V+N KE+ELLL+HNR               KY+AEIAHNVSSRKRK IVE+A QL ++VTNA AKL AEEDA
Sbjct:   59 NIGY-GSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNR---------------KYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEEDA 137          
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: A0A7S0EVQ0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EVQ0_9EUKA)

HSP 1 Score: 109 bits (273), Expect = 1.400e-28
Identity = 59/94 (62.77%), Postives = 74/94 (78.72%), Query Frame = 0
Query:   19 SVGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEED 112
            +VG+ GSDKRTR++LP+GFYKF+VHNVKELE+L+M NR               KYAAEIAHNVS+RKRKEIVERA QL+I+VTNA A++ +EE+
Sbjct:   55 NVGY-GSDKRTRHMLPSGFYKFVVHNVKELEVLMMQNR---------------KYAAEIAHNVSARKRKEIVERANQLNIKVTNATARVRSEEN 132          
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: A0A7S2SH78_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH78_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.520e-28
Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 0
Query:   20 VGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 113
            VG+ GSDKRTRNLLPNGFYKFLV NV++LELL+MHNR               KY AEIAHNVS+ KR+EIV RA QL I+VTNA AKL  EEDA
Sbjct:   59 VGY-GSDKRTRNLLPNGFYKFLVSNVEDLELLMMHNR---------------KYCAEIAHNVSTLKRQEIVTRANQLAIKVTNANAKLREEEDA 136          
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Match: A0A482UR32_9ARCH (50S ribosomal protein L32e n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UR32_9ARCH)

HSP 1 Score: 108 bits (269), Expect = 2.250e-28
Identity = 60/94 (63.83%), Postives = 66/94 (70.21%), Query Frame = 0
Query:   20 VGFVGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 113
            + F GSDK TRNLLPNGFYKF+VHN KELE+LLMHNR               KY AEIAHNVSSR RK IVERA QL+++VTNA AKL   E A
Sbjct:   21 IFFSGSDKATRNLLPNGFYKFVVHNAKELEMLLMHNR---------------KYCAEIAHNVSSRTRKLIVERAEQLNVKVTNAVAKLRKVESA 99          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48227.11971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTG6_ECTSI4.390e-4080.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YGQ7_9STRA7.010e-3266.32Ribosomal protein L32e n=1 Tax=Tribonema minus Tax... [more]
A0A7S2XAB1_9EUKA1.780e-3167.37Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S0L5M3_9EUKA5.150e-2965.26Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S1UMM3_9STRA5.860e-2962.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4LKX9_9STRA7.580e-2962.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7T4V3_9STRA1.110e-2863.16Ribosomal protein l32 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S0EVQ0_9EUKA1.400e-2862.77Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S2SH78_9STRA1.520e-2865.96Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A482UR32_9ARCH2.250e-2863.8350S ribosomal protein L32e n=1 Tax=archaeon TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 3..102
e-value: 7.3E-21
score: 85.3
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 65..102
e-value: 1.1E-11
score: 45.0
coord: 20..56
e-value: 1.8E-10
score: 41.2
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 66..112
coord: 19..57
NoneNo IPR availablePRODOMPD003823coord: 6..102
e-value: 7.0E-21
score: 242.0
IPR036351Ribosomal protein L32e superfamilySUPERFAMILY52042Ribosomal protein L32ecoord: 24..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48227contigH-elongata_contig48227:2643..3176 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48227.11971.1mRNA_H-elongata_contig48227.11971.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48227 2643..3482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48227.11971.1 ID=prot_H-elongata_contig48227.11971.1|Name=mRNA_H-elongata_contig48227.11971.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MSEESFSSVYRIPRNVRSSVGFVGSDKRTRNLLPNGFYKFLVHNVKELEL
LLMHNRVRSSSSPMSLIDACRKYAAEIAHNVSSRKRKEIVERAGQLHIRV
TNAGAKLSAEEDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR036351Ribosomal_L32e_sf