prot_H-elongata_contig48067.11946.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48067.11946.1
Unique Nameprot_H-elongata_contig48067.11946.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length610
Homology
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BLAST of mRNA_H-elongata_contig48067.11946.1 vs. uniprot
Match: A0A6H5K7S5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S5_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 5.520e-69
Identity = 295/451 (65.41%), Postives = 322/451 (71.40%), Query Frame = 0 
Query:   44 NADAVRRALRGMESELVDLVLNSSCAGG---WMDWLRVPLECATTTGRLDAVKRLLAAGVETSIPPRRSSPGPLLHAAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EAPDARGWTPLHVAAKLGHRGVVVFLLLKGAHTLRTTLPEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEACIALLRAGSAVGRVSSQGLSCLDIAAWNGHTGRLLQILTAAEPTADRKRRCSLALYYATKANKPSTIHDLVELGANVDQRKSGGMTNLHLAAARGTDGATEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDVVGTASANTEAVVVAAAAATEEFEDKLVRDDAIRQMLESAPADRVWRRRSWLVLCRARWLARIMDN-KPREAP 489
            +ADA+R A+RGMES+LVDLV + S         DWL+VPLE AT +G L  VKRLL+AGV T  P        LLH     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   D RGWTPLH+AA  G+RGVVVFLLLKGA +         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL ACIALLR G+ VGRV S+GLSCLD AAWNGH+G+LLQILTA E  ADRKRRCSLALYYA KANK  TI DLV+LGA+V+  +S G TNLH  A RG   AT+AL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            D+VG  S   E +      + E    K + D AIR ML +APADRVWRRR WLVLCRARWLAR+ +  KP  AP
Sbjct:   54 SADAMREAIRGMESDLVDLVFSGSSRAPPRELEDWLKVPLEYATASGNLAVVKRLLSAGVGTDPPSNGMRLRLLLHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDAAVRAIASDPRAVVNVADTRGWTPLHIAANAGYRGVVVFLLLKGAKSWLKIASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGACIALLRGGATVGRVCSKGLSCLDTAAWNGHSGQLLQILTAGESPADRKRRCSLALYYAAKANKTDTIRDLVDLGADVNTTRSAGNTNLHCTATRGAYAATQALLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETATNYDNLTAHDLVGH-SVEEELL------SNEALVSKELVDTAIRSMLVNAPADRVWRRRGWLVLCRARWLARVAEKRKPLLAP 497
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BLAST of mRNA_H-elongata_contig48067.11946.1 vs. uniprot
Match: D8LNL9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL9_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 2.900e-56
Identity = 221/326 (67.79%), Postives = 239/326 (73.31%), Query Frame = 0 
Query:   44 NADAVRRALRGMESELVDLVLNSSCAGG---WMDWLRVPLECATTTGRLDAVKRLLAAGVETSIPPRRSSPGPLLHAAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EAPDARGWTPLHVAAKLGHRGVVVFLLLKGAHTLRTTLPEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEACIALLRAGSAVGRVSSQGLSCLDIAAWNGHTGRLLQILTAAEPTADRKRRCSLALYYATKANKPSTIHDLVELGANVDQRKSGGMTNLHLAAARGTDGATEAL 365
            +ADA+R A+RGMESELVDLV + S         DWL+VPLE AT +G L  VKRLL+AGV T  P        LLH     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   D RGWTPLH+AA  G+RGVVVFLLLKGA +         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL ACIALLR G+ VGRV S+GLSCLD AAWNGH+G+LLQILTA E  ADRKRRCSLALYYA KANK  TI DLV+LGA+V+  +SGG TNLH  A RG   AT AL
Sbjct:   52 SADAMREAVRGMESELVDLVFSGSSRAPPRELEDWLKVPLEYATASGNLAVVKRLLSAGVGTDPPSNGMRLRLLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDAAVRAIASDPRAVVNVADTRGWTPLHIAANAGYRGVVVFLLLKGAKSWLKIASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGACIALLRGGATVGRVCSKGLSCLDTAAWNGHSGQLLQILTAVESPADRKRRCSLALYYAAKANKTDTIRDLVDLGADVNTTRSGGNTNLHCTATRGAYAATHAL 377
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48067.11946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7S5_9PHAE5.520e-6965.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNL9_ECTSI2.900e-5667.79Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 179..194
score: 44.63
coord: 361..375
score: 31.89
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 246..275
e-value: 0.099
score: 21.8
coord: 279..307
e-value: 1200.0
score: 4.4
coord: 145..174
e-value: 0.2
score: 20.7
coord: 378..409
e-value: 0.14
score: 21.2
coord: 212..241
e-value: 3.6
score: 16.6
coord: 109..139
e-value: 54.0
score: 12.6
coord: 178..208
e-value: 0.037
score: 23.2
coord: 345..374
e-value: 1.2
score: 18.2
coord: 75..104
e-value: 410.0
score: 7.9
coord: 312..341
e-value: 59.0
score: 12.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 145..177
score: 10.339
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 246..278
score: 9.538
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 378..410
score: 10.152
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 178..203
score: 10.82
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 212..236
score: 8.736
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 345..377
score: 10.953
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 115..142
score: 10.045
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 44..207
e-value: 6.6E-30
score: 106.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 299..450
e-value: 4.2E-25
score: 90.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 208..298
e-value: 1.0E-15
score: 59.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 78..418
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 317..403
e-value: 2.5E-9
score: 37.6
coord: 115..204
e-value: 2.5E-14
score: 53.6
coord: 217..300
e-value: 5.1E-8
score: 33.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 79..416
score: 70.379
NoneNo IPR availablePANTHERPTHR24124FAMILY NOT NAMEDcoord: 145..293
coord: 290..433
coord: 77..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48067contigH-elongata_contig48067:1071..3488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48067.11946.1mRNA_H-elongata_contig48067.11946.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48067 954..3657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48067.11946.1 ID=prot_H-elongata_contig48067.11946.1|Name=mRNA_H-elongata_contig48067.11946.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=610bp
MSSTESAASSSVASNFSTTPARAPSWWEDNDIDNDIDIDIGCPNADAVRR
ALRGMESELVDLVLNSSCAGGWMDWLRVPLECATTTGRLDAVKRLLAAGV
ETSIPPRRSSPGPLLHAAAANGNAGVVCELLKAGADVHEVDKTRSDRTAL
HSAAGSGAEDAVLALVRAGAKVEAPDARGWTPLHVAAKLGHRGVVVFLLL
KGAHTLRTTLPEGDTALHLAASGNHAGVIEDLVVLGDACVSCPNVNGQTA
LHIAARGCHLEACIALLRAGSAVGRVSSQGLSCLDIAAWNGHTGRLLQIL
TAAEPTADRKRRCSLALYYATKANKPSTIHDLVELGANVDQRKSGGMTNL
HLAAARGTDGATEALLRAGASLEARSHGGDTPLHRACSFSQRNTVRLLLR
CGALETIRNFGNQTPFDVVGTASANTEAVVVAAAAATEEFEDKLVRDDAI
RQMLESAPADRVWRRRSWLVLCRARWLARIMDNKPREAPPRKKPAPIPFP
SLSPSSSEKRPDKNAAAVVLAVHPSKRPREVDKSKAKRRRTKGGVGAVLR
LGRDSVLSDILLREGALSDGEAGLRSIKEGAGNARFLRAVERLLLLREEG
VFREVVAYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom