prot_H-elongata_contig4786.11924.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4786.11924.1
Unique Nameprot_H-elongata_contig4786.11924.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: D8LGP5_ECTSI (Farnesyl pyrophosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP5_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 2.870e-91
Identity = 141/158 (89.24%), Postives = 150/158 (94.94%), Query Frame = 0
Query:    1 MIVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAVFHQFIDKIYKRSK 158
            MIVRYKTAYYTFYLPCAIGMIYAGVKD ASYRLARDICCRIGEFFQIQDD+LDCFGDP+VIGKVGTDIQDNKCSWLVVQAL+RA K QKA+L++NYAIDEE KIERVK LYREL LE VY+KYEE+THKQIK+LIAKVE IPHAVFHQFIDKIYKRSK
Sbjct:  342 MIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALERASKAQKAVLIQNYAIDEEAKIERVKELYRELKLEKVYAKYEEDTHKQIKELIAKVEDIPHAVFHQFIDKIYKRSK 499          
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: A0A6H5L554_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L554_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 4.440e-80
Identity = 127/145 (87.59%), Postives = 137/145 (94.48%), Query Frame = 0
Query:    1 MIVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAV 145
            MIVRYKTAYYTFYLPCAIGMIYAGVKD ASYRLARDICCRIGEFFQIQDD+LDCFGDP+VIGKVGTDIQDNKCSWLVVQAL+RA + QKA+L++NYAIDEE KIERVK LYREL LE VY+KYEE+THKQIK+LIAKVE IPHAV
Sbjct:  360 MIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALERASRAQKAVLIQNYAIDEEAKIERVKELYRELKLEEVYAKYEEDTHKQIKELIAKVEDIPHAV 504          
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: A0A835YUF9_9STRA (Farnesyl pyrophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUF9_9STRA)

HSP 1 Score: 206 bits (524), Expect = 5.920e-62
Identity = 101/158 (63.92%), Postives = 125/158 (79.11%), Query Frame = 0
Query:    1 MIVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAVFHQFIDKIYKRSK 158
            MIV+YKTA+YTFYLPCAIGMIYAGV D +S+ LAR ICC IGE+FQIQDD+LDC+GDP  IGKVGTDIQD KCSWLVVQAL+R    QK  L+ NY  D+ EKI +VKA+Y +L L  VY  YEE+++K+I+ LI +V+ +P  V+H F+ +IYKR K
Sbjct:  295 MIVKYKTAFYTFYLPCAIGMIYAGVSDPSSFALARRICCTIGEYFQIQDDYLDCYGDPKFIGKVGTDIQDMKCSWLVVQALERCSAAQKDELIANYGKDDAEKIGKVKAIYNDLKLADVYHAYEEQSYKEIQGLIEEVKDVPKDVYHNFVKRIYKRDK 452          
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: A0A812TYN2_SYMMI (Fps protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TYN2_SYMMI)

HSP 1 Score: 194 bits (493), Expect = 8.590e-59
Identity = 97/157 (61.78%), Postives = 123/157 (78.34%), Query Frame = 0
Query:    2 IVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAVFHQFIDKIYKRSK 158
            IV+YKTA+Y+FYLP A+GM+ AGV + A Y  AR+I C +GE+FQIQDD LDCFG P+VIGKVGTDIQDNKCSWLVVQAL RADK+Q+ LL  NY   +++K+E+VK LYR+L+LE ++ KYEEE+H QIK +I     +P  VF   + KIYKR+K
Sbjct:  163 IVKYKTAFYSFYLPVALGMVKAGVTERALYDKAREILCIMGEYFQIQDDVLDCFGAPEVIGKVGTDIQDNKCSWLVVQALDRADKKQRELLERNYGQHDDKKVEKVKTLYRDLNLEQLFQKYEEESHAQIKAMIDSTPDLPREVFEFLLKKIYKRTK 319          
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: A0A835Z5G4_9STRA (Farnesyl pyrophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G4_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.290e-58
Identity = 97/158 (61.39%), Postives = 126/158 (79.75%), Query Frame = 0
Query:    1 MIVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAVFHQFIDKIYKRSK 158
            MIV+YKTA+YTFYLPCAIGMIYA V D +S+ LAR ICC IGE+FQIQDD+LDC+GDP VIGKVGTDIQD KCSWLVVQAL++   +Q+  L++NY  ++ +KI +VKALY  L L + Y  YEE++H +I+ LIA+V+ +P  V++ F+ +IYKR K
Sbjct:  348 MIVKYKTAFYTFYLPCAIGMIYASVSDPSSFALARRICCIIGEYFQIQDDYLDCYGDPAVIGKVGTDIQDMKCSWLVVQALEKCTPEQRQQLMDNYGKNDPKKIAKVKALYTALGLPAAYRNYEEQSHGEIQTLIAEVKDVPTDVYNNFVKRIYKRDK 505          
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: A0A7S2JT51_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JT51_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.200e-58
Identity = 98/158 (62.03%), Postives = 126/158 (79.75%), Query Frame = 0
Query:    1 MIVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAVFHQFIDKIYKRSK 158
            +IV+YKTA+YTFYL  AIGMI +GV D  +Y LA++ICC IGE+FQIQDD+LDC+GDP VIGKVGTDIQDNKCSWLVVQAL+R D +QK LL ENY   +++K+++VK LY EL LE V+ +YEE ++++I+  + KVE +P  VF   + KIYKRSK
Sbjct:  208 LIVKYKTAFYTFYLSVAIGMITSGVTDPEAYSLAKEICCIIGEYFQIQDDYLDCYGDPAVIGKVGTDIQDNKCSWLVVQALERVDAEQKKLLEENYGQWDDDKVKKVKDLYGELGLEQVFKEYEEASYERIQKGLEKVELMPKEVFELLLKKIYKRSK 365          
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: E1Z2N1_CHLVA (Uncharacterized protein FPPS n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z2N1_CHLVA)

HSP 1 Score: 192 bits (487), Expect = 1.440e-57
Identity = 93/157 (59.24%), Postives = 121/157 (77.07%), Query Frame = 0
Query:    2 IVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAVFHQFIDKIYKRSK 158
            IV YKTA+YTFYLP A G+  AG+ D A+Y+LA DIC ++G +FQIQDD+LDCFGDP+VIGK+GTDIQDNKCSWLVVQAL RA ++QKA + E+Y  DEE  ++RVK +YR+LDLE ++ KYE+++H Q+   I   + +P  VF   + KIYKR K
Sbjct:  190 IVTYKTAFYTFYLPVACGLRLAGITDPAAYKLAEDICLQMGRYFQIQDDYLDCFGDPEVIGKIGTDIQDNKCSWLVVQALTRASEEQKAAIEESYGKDEEAAVQRVKEVYRQLDLEGLFKKYEQDSHDQLVKTIEGQDLLPQGVFTMLLKKIYKRQK 346          
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: A0A2P6VM23_9CHLO (Farnesyl diphosphate synthase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VM23_9CHLO)

HSP 1 Score: 189 bits (479), Expect = 3.300e-56
Identity = 93/157 (59.24%), Postives = 122/157 (77.71%), Query Frame = 0
Query:    2 IVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAVFHQFIDKIYKRSK 158
            IV YKTAYYTFYLP A G+  AGV D A+Y+LA DIC  +G++FQIQDD+LDC+GDP VIGK+GTDIQDNKCSWLVVQALQRA + QK ++ +NY  D++ K++ VKA+YREL LE+V+ +YE+E++ ++   I   + +P AVF   + KIYKR K
Sbjct:  204 IVTYKTAYYTFYLPVACGLRLAGVTDPAAYKLAEDICVTMGQYFQIQDDYLDCYGDPVVIGKIGTDIQDNKCSWLVVQALQRASEAQKKVIEDNYGQDDKGKVQAVKAVYRELQLEAVFKQYEQESYNKLVQTIKGQDLLPQAVFTMLLKKIYKRQK 360          
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: A0A0G4EIF1_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EIF1_VITBC)

HSP 1 Score: 186 bits (472), Expect = 4.310e-55
Identity = 91/158 (57.59%), Postives = 122/158 (77.22%), Query Frame = 0
Query:    2 IVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIP-HAVFHQFIDKIYKRSK 158
            IVR+KTAYY+FY+PCA+GMI  G++D A+++   DIC  +G++FQIQDDFLDC+GDP+VIGKVGTDIQ+NKCSWLV QALQRAD+ Q+ +L+ENY  D+   + ++K LY+ L LE VY+ YEEE   +I +LIA VE     ++F   + KIYKR+K
Sbjct:  209 IVRHKTAYYSFYMPCALGMIVGGIEDDAAFQKTEDICMELGQYFQIQDDFLDCYGDPEVIGKVGTDIQENKCSWLVCQALQRADESQRQILIENYGRDDLSAVAKIKTLYKTLKLEDVYAAYEEEAKVKIDNLIASVESASLQSLFKFLLSKIYKRNK 366          
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Match: A0A7S3V6T5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6T5_9STRA)

HSP 1 Score: 187 bits (476), Expect = 5.320e-55
Identity = 95/157 (60.51%), Postives = 122/157 (77.71%), Query Frame = 0
Query:    2 IVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDDFLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDEEEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAVFHQFIDKIYKRSK 158
            IV+YKTA+YTFYLP AIGMI + V++  +Y LA+ ICC++GE+FQIQDD+LDCFGDP+VIGKVGTDIQDNKCSWLVVQAL R   +Q+A+L  NY   +++K+  VKALY+ELDL  V+  YEE++ K I+  + KV  +P  VF   + KIYKRSK
Sbjct:  276 IVKYKTAFYTFYLPVAIGMITSRVEEGPTYDLAKKICCQMGEYFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALDRVTPEQRAVLEANYGQWDDQKVANVKALYKELDLVKVFQTYEEDSFKIIQTELDKVTTMPRDVFELLLKKIYKRSK 432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4786.11924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGP5_ECTSI2.870e-9189.24Farnesyl pyrophosphate synthase n=1 Tax=Ectocarpus... [more]
A0A6H5L554_9PHAE4.440e-8087.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YUF9_9STRA5.920e-6263.92Farnesyl pyrophosphate synthase n=1 Tax=Tribonema ... [more]
A0A812TYN2_SYMMI8.590e-5961.78Fps protein n=1 Tax=Symbiodinium microadriaticum T... [more]
A0A835Z5G4_9STRA1.290e-5861.39Farnesyl pyrophosphate synthase n=1 Tax=Tribonema ... [more]
A0A7S2JT51_9STRA4.200e-5862.03Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
E1Z2N1_CHLVA1.440e-5759.24Uncharacterized protein FPPS n=1 Tax=Chlorella var... [more]
A0A2P6VM23_9CHLO3.300e-5659.24Farnesyl diphosphate synthase n=1 Tax=Micractinium... [more]
A0A0G4EIF1_VITBC4.310e-5557.59Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S3V6T5_9STRA5.320e-5560.51Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..117
NoneNo IPR availablePANTHERPTHR11525:SF0FARNESYL PYROPHOSPHATE SYNTHASEcoord: 2..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availableTMHMMTMhelixcoord: 7..25
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 2..113
e-value: 8.2E-39
score: 133.2
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 1..158
e-value: 3.6E-54
score: 185.8
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 2..157
IPR039702Farnesyl pyrophosphate synthasePANTHERPTHR11525FARNESYL-PYROPHOSPHATE SYNTHETASEcoord: 2..158
IPR033749Polyprenyl synthetase, conserved sitePROSITEPS00444POLYPRENYL_SYNTHASE_2coord: 41..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4786contigH-elongata_contig4786:350..1900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4786.11924.1mRNA_H-elongata_contig4786.11924.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4786 2..4264 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4786.11924.1 ID=prot_H-elongata_contig4786.11924.1|Name=mRNA_H-elongata_contig4786.11924.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
MIVRYKTAYYTFYLPCAIGMIYAGVKDAASYRLARDICCRIGEFFQIQDD
FLDCFGDPDVIGKVGTDIQDNKCSWLVVQALQRADKQQKALLLENYAIDE
EEKIERVKALYRELDLESVYSKYEEETHKQIKDLIAKVEHIPHAVFHQFI
DKIYKRSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000092Polyprenyl_synt
IPR008949Isoprenoid_synthase_dom_sf
IPR039702FPS1
IPR033749Polyprenyl_synt_CS