prot_H-elongata_contig47364.11850.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 2.120e-19 Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 0
Query: 5 RDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGVLAIVEVRK 65
RD +AR+EDES GYVMS +VM+R+ARKCPS+RD+LE CGNPLP LVQ+ AE +L IVE K
Sbjct: 529 RDMIARAEDESYGYVMSAYVMIRVARKCPSSRDDLEGCGNPLPRLVQQHAEDILEIVENAK 589
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: A0A836CIH7_9STRA (Protein in complex with Mn, Zn, and Amp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH7_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 8.380e-13 Identity = 32/57 (56.14%), Postives = 45/57 (78.95%), Query Frame = 0
Query: 5 RDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGVLAIV 61
RDA+AR EDES GYVMS ++MLR+AR P++ D L C PLPPLVQ++++ V+A++
Sbjct: 291 RDALAREEDESPGYVMSAYLMLRLARAAPASHDALVRCAAPLPPLVQQRSDEVIALL 347
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: A0A816G701_9BILA (Hypothetical protein (Fragment) n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A816G701_9BILA) HSP 1 Score: 57.8 bits (138), Expect = 4.720e-9 Identity = 25/58 (43.10%), Postives = 40/58 (68.97%), Query Frame = 0
Query: 5 RDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGVLAIVE 62
RD +AR+EDESTGYV+ +++LRI+ P T +++ +C NP P LV++ + IV+
Sbjct: 35 RDKLARTEDESTGYVLPNYMLLRISEMLPKTAEDIRACCNPTPILVRQNLHDIYQIVQ 92
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: A0A093J177_EURHL (Exosome component 10 (Fragment) n=1 Tax=Eurypyga helias TaxID=54383 RepID=A0A093J177_EURHL) HSP 1 Score: 60.5 bits (145), Expect = 7.650e-9 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0
Query: 1 MFLARDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGVLAIVE 62
+F RD VAR EDESTGYV+ H++L+IA K P + +C NP+PPLV+++ + +++
Sbjct: 387 LFAWRDKVARQEDESTGYVLPNHMLLKIAEKLPKEPQGIIACCNPVPPLVRQQINELHLLIQ 448
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: A0A671VE32_SPAAU (Exosome component 10 n=2 Tax=Sparus aurata TaxID=8175 RepID=A0A671VE32_SPAAU) HSP 1 Score: 60.1 bits (144), Expect = 1.050e-8 Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 0
Query: 1 MFLARDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGVLAIVE------VRKYIF 68
+F RD +AR EDESTGYV+ H+M++I+ + P + +C NP+PPLV+++ + +V+ + KY+F
Sbjct: 514 LFAWRDKLARQEDESTGYVLPTHMMIKISEELPKEPQGIIACCNPVPPLVRQQVNALHLLVQQAREMPLLKYLF 587
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: A0A672ZGD7_9TELE (Exosome component 10 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672ZGD7_9TELE) HSP 1 Score: 59.7 bits (143), Expect = 1.420e-8 Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 0
Query: 1 MFLARDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGV-LAIVEVRKYI 67
+F RD +AR EDESTGYVM H+M++I+ + P + +C NP+PPLV+++ + L I E R+ +
Sbjct: 513 LFAWRDKLARQEDESTGYVMPTHMMIKISEELPKEPQGIIACCNPVPPLVRQQINELHLLIQEAREIL 580
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: A0A672ZH80_9TELE (Exosome component 10 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672ZH80_9TELE) HSP 1 Score: 59.3 bits (142), Expect = 1.940e-8 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0
Query: 1 MFLARDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGV-LAIVEVRK 65
+F RD +AR EDESTGYVM H+M++I+ + P + +C NP+PPLV+++ + L I E R+
Sbjct: 488 LFAWRDKLARQEDESTGYVMPTHMMIKISEELPKEPQGIIACCNPVPPLVRQQINELHLLIQEARE 553
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: A0A672ZIV7_9TELE (Exosome component 10 n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672ZIV7_9TELE) HSP 1 Score: 59.3 bits (142), Expect = 1.940e-8 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0
Query: 1 MFLARDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGV-LAIVEVRK 65
+F RD +AR EDESTGYVM H+M++I+ + P + +C NP+PPLV+++ + L I E R+
Sbjct: 472 LFAWRDKLARQEDESTGYVMPTHMMIKISEELPKEPQGIIACCNPVPPLVRQQINELHLLIQEARE 537
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: A0A672ZIM6_9TELE (Exosome component 10 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672ZIM6_9TELE) HSP 1 Score: 59.3 bits (142), Expect = 1.940e-8 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0
Query: 1 MFLARDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGV-LAIVEVRK 65
+F RD +AR EDESTGYVM H+M++I+ + P + +C NP+PPLV+++ + L I E R+
Sbjct: 513 LFAWRDKLARQEDESTGYVMPTHMMIKISEELPKEPQGIIACCNPVPPLVRQQINELHLLIQEARE 578
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Match: A0A672ZII7_9TELE (Exosome component 10 n=3 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672ZII7_9TELE) HSP 1 Score: 59.3 bits (142), Expect = 1.950e-8 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0
Query: 1 MFLARDAVARSEDESTGYVMSLHVMLRIARKCPSTRDELESCGNPLPPLVQRKAEGV-LAIVEVRK 65
+F RD +AR EDESTGYVM H+M++I+ + P + +C NP+PPLV+++ + L I E R+
Sbjct: 514 LFAWRDKLARQEDESTGYVMPTHMMIKISEELPKEPQGIIACCNPVPPLVRQQINELHLLIQEARE 579 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47364.11850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig47364.11850.1 ID=prot_H-elongata_contig47364.11850.1|Name=mRNA_H-elongata_contig47364.11850.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bpback to top |