prot_H-elongata_contig46926.11790.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46926.11790.1
Unique Nameprot_H-elongata_contig46926.11790.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
[Close]
BLAST of mRNA_H-elongata_contig46926.11790.1 vs. uniprot
Match: D7FR35_ECTSI (Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR35_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.190e-51
Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 0 
Query:    2 EAAERQNTVKTAARLGCAVGNLNKRQQAMLVAKDQEWLWASDFLPCLEFSDPIFTPSMVATWIGEIGLAHLRRGRLLLAHNYMQEALAYLGFKPVPKQDLLLQRMWCLALEYARQHN--RNVDDSLFAAGLYGSIADISIK 140
            EAAER +  +TAARLGC+VGNL KRQ+ MLVAKDQEWLWA+DFLP LEFSDP+F+P++VA WIG IG+AHL  GRLL AHN+MQEAL YLGF  VP Q L   R  CLA E+       R+ DD+LFAA LYG+IADISIK
Sbjct: 1747 EAAERLHAARTAARLGCSVGNLTKRQREMLVAKDQEWLWAADFLPWLEFSDPLFSPTLVARWIGAIGMAHLHLGRLLPAHNHMQEALVYLGFPAVPSQALPFDRAACLAKEFFLMQGPARDSDDTLFAAKLYGAIADISIK 1887
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46926.11790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR35_ECTSI1.190e-5167.38Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46926contigH-elongata_contig46926:1278..2346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46926.11790.1mRNA_H-elongata_contig46926.11790.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46926 1278..2346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46926.11790.1 ID=prot_H-elongata_contig46926.11790.1|Name=mRNA_H-elongata_contig46926.11790.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
EEAAERQNTVKTAARLGCAVGNLNKRQQAMLVAKDQEWLWASDFLPCLEF
SDPIFTPSMVATWIGEIGLAHLRRGRLLLAHNYMQEALAYLGFKPVPKQD
LLLQRMWCLALEYARQHNRNVDDSLFAAGLYGSIADISIK
back to top