prot_H-elongata_contig46607.11759.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46607.11759.1
Unique Nameprot_H-elongata_contig46607.11759.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
BLAST of mRNA_H-elongata_contig46607.11759.1 vs. uniprot
Match: A0A835Z6T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.590e-48
Identity = 93/234 (39.74%), Postives = 111/234 (47.44%), Query Frame = 0
Query:   14 CGTATSSSPCCIECFGLSYCDVLNGYKVEDKYYPGEPTILGSCDNFEDRASRLDVFGPSKT-----------------------------------------------FRDTYACREMVLDYTCLWWGSDNEMYDNRCGVEAQVYPCRSYCVQLAKTCANNVLEWQELCRP--------------------------INCPPIDDECMPGPYTQDPDE--ACYLYEYHSPLSAG 172
            CG A +  PCC+ C GL+ C VLN Y VE+KYYPG    +GSC NF+DR SRL VFGP KT                                               FRDT  CR+ V  YTCLWWG+DN  +DNRCG  A   PCRS+CVQ+A+ CAN+   W                                I CPPI D+C+PGP+   P E  AC+LYEY+SPL  G
Sbjct:   52 CGVAPNPVPCCVLCLGLNQCSVLNSYAVEEKYYPGSSGTVGSCTNFDDRVSRLAVFGPEKTVWXXXXXXXXXXXXXXXSCDAAQVXXXXXXXXEKTVSXXXXXXXXXXFRDTPDCRKWVYAYTCLWWGTDNAHFDNRCGSFANRPPCRSFCVQVAEVCANDP-GWNAAAXXXXXXXAAAQVXXXXXXXXXXXXXXXGIACPPIADDCVPGPFVTHPVEPDACFLYEYNSPLQGG 284          
BLAST of mRNA_H-elongata_contig46607.11759.1 vs. uniprot
Match: A0A7S2MQ94_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQ94_9STRA)

HSP 1 Score: 164 bits (416), Expect = 6.310e-48
Identity = 79/162 (48.77%), Postives = 98/162 (60.49%), Query Frame = 0
Query:   13 DCGTATSSSPCCIECFGLSYCDVLNGYKVEDKYYPGEPTILGSCDNFEDRASRLDVFGPSK---TFRDTYACREMVLDYTCLWWGSDNEMYDNRCGVEAQV-YPCRSYCVQLAKTCANNVLEWQELCRPINCPPIDDECMPGPYTQDPDEACYLYEYHSPLS 170
            DCG   +  PCCI+C  L YC  +N Y +EDKYYP E  I GSCD  +DR  RL++FGP+    TFRDT  CR +V+DY CLWW S+N+ YDNRC     +  PCRSYCVQ+   CAN+ L+W + C  I C   +  C  GP   D D  C + EY S  S
Sbjct:   48 DCGIDDNQCPCCIQCESLDYCSAINFYVMEDKYYPTENDITGSCDMLDDRIQRLEIFGPASLGYTFRDTDQCRSLVMDYICLWWASENDHYDNRCDYGEDIDRPCRSYCVQVGLVCANS-LDWLDTCYHIECASNEAGCTTGP--DDIDYKCAIPEYISSFS 206          
BLAST of mRNA_H-elongata_contig46607.11759.1 vs. uniprot
Match: A0A7S2C5P0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5P0_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.950e-44
Identity = 78/158 (49.37%), Postives = 95/158 (60.13%), Query Frame = 0
Query:   13 DCGTATSSSPCCIECFG--LSYC-DVLNGYKVEDKYYPGEPTILGSCDNFEDRASRLDVFGPSKTFRDTYACREMVLDYTCLWWGSDNEMYDNRCGVEAQVY-PCRSYCVQLAKTCANNVLEWQELCRPINCPPIDD-ECMPGPYTQDPDEACYLYEY 165
            DCGT+    PCCI C    +SYC D L G  +ED+YYP E  I GSCDN ++R   LDVFG  KTFRD   CR++V +Y CLWWGS+N  Y+NRC    Q   PCR +CVQ+   CANN  +W  LC  I C   D  EC P PY+      C +YE+
Sbjct:  121 DCGTSDEECPCCIRCLNEEMSYCHDALGGKLLEDQYYPTEKGISGSCDNLDERVGALDVFGKGKTFRDNDECRDLVREYVCLWWGSENAHYENRCNNGGQAAKPCRGFCVQVGLVCANNE-DWMNLCYDIPCSAGDGPECTPAPYSTS--FLCSVYEF 275          
BLAST of mRNA_H-elongata_contig46607.11759.1 vs. uniprot
Match: A0A8J2WWI3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWI3_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.540e-40
Identity = 73/153 (47.71%), Postives = 96/153 (62.75%), Query Frame = 0
Query:   23 CCIECFG-LSYCDVLNGYKVEDKYYPGEPTILGSCDNFEDRASRLDVFGPSKTFRDTYACREMVLDYTCLWWGSD--NEMYDNRCGVEAQVY--PCRSYCVQLAKTCANNVLEWQELCRPINCPPIDDECMPGP-----YTQDPDEACYLYEY 165
            CC  C   L  C  + GY VEDKYYP E ++ GSCD+ + R + LDVFGPSKTFRD   CR +V +Y CLWWGS+  ++  +N C  +  +   PCR +CVQ+A  CAN+ L++Q LC+ I CPPI++ CMP P      T     ACY+Y Y
Sbjct:  120 CCSLCKNDLQTCWRMAGYLVEDKYYPSEQSVTGSCDDIDRRVANLDVFGPSKTFRDNDLCRRLVNEYMCLWWGSEGVDQSSENHCSSKGVILVAPCRPFCVQVAIQCANS-LDYQRLCQAIPCPPIEETCMPEPRSVATVTLSKTMACYVYRY 271          
BLAST of mRNA_H-elongata_contig46607.11759.1 vs. uniprot
Match: A0A7S0SRC5_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRC5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 6.000e-32
Identity = 60/149 (40.27%), Postives = 87/149 (58.39%), Query Frame = 0
Query:   18 TSSSPCCIECFGLSYCDVLNGYKVEDKYYPGEPTILGSCDNFEDRASRL--DVFGPSKTFRDTYACREMVLDYTCLWWGSDNEMYDNRCGVEAQVY-------------PCRSYCVQLAKTCANNVLEWQELCRPINCPPIDDECMPGP 151
            TS  PC I C GL YC  +NG  +++ YYP + ++LGSC   E    R+  ++FG   T+RDT  CR +V+ Y CL++GS+N+MY N C  +  V              PC+S+CVQ+A  CAN+ +++  +C  I CPP +D C P P
Sbjct:   43 TSEVPCVI-CRGLKYCSAINGLMLQEVYYPYDLSLLGSCYVLEAFGKRIYSEIFGNGGTYRDTVECRSIVMQYLCLFYGSNNDMYTNYCIYQEDVSDANPANHKVAPRPPCKSFCVQVATVCANDPVDFLYICNEIACPPTEDACNPDP 190          
BLAST of mRNA_H-elongata_contig46607.11759.1 vs. uniprot
Match: A0A7S2FUR6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FUR6_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.300e-24
Identity = 50/102 (49.02%), Postives = 61/102 (59.80%), Query Frame = 0
Query:   66 LDVFGPSKTFRDTYACREMVLDYTCLWWGSDNEMYDNRCGVEAQVY-PCRSYCVQLAKTCANNVLEWQELCRPINCPPIDD-ECMPGPYTQDPDEACYLYEY 165
            LDVFG  KTFRD   CR++V +Y CLWWGS+N  Y+NRC    Q   PCR +CVQ+   CANN  +W  LC  I C   D  EC P PY+      C +YE+
Sbjct:    8 LDVFGKGKTFRDNDECRDLVREYVCLWWGSENAHYENRCNNGGQAAKPCRGFCVQVGLVCANNE-DWMNLCYDIPCSAGDGPECTPAPYSTS--FLCSVYEF 106          
BLAST of mRNA_H-elongata_contig46607.11759.1 vs. uniprot
Match: A0A482SB23_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB23_9ARCH)

HSP 1 Score: 60.5 bits (145), Expect = 1.780e-8
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   24 CIECFGLSYCDVLNGYKVEDKYYPGEPTILGSCDNFEDRASRLD--VFGPSKTFRDTYACR 82
            C+ C GLS C  LNGY V++KYYP       +C   +   SR++  +FG S+TFRDT  CR
Sbjct:   69 CVICRGLSVCTALNGYLVQEKYYPKNLNFRETCKVIDTFGSRIEKSIFGGSRTFRDTAQCR 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46607.11759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835Z6T3_9STRA1.590e-4839.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2MQ94_9STRA6.310e-4848.77Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2C5P0_9STRA1.950e-4449.37Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2WWI3_9STRA1.540e-4047.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0SRC5_9STRA6.000e-3240.27Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2FUR6_9STRA1.300e-2449.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A482SB23_9ARCH1.780e-845.90Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46607contigH-elongata_contig46607:134..3080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46607.11759.1mRNA_H-elongata_contig46607.11759.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46607 134..3080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46607.11759.1 ID=prot_H-elongata_contig46607.11759.1|Name=mRNA_H-elongata_contig46607.11759.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
ALGRRGLATTSSDCGTATSSSPCCIECFGLSYCDVLNGYKVEDKYYPGEP
TILGSCDNFEDRASRLDVFGPSKTFRDTYACREMVLDYTCLWWGSDNEMY
DNRCGVEAQVYPCRSYCVQLAKTCANNVLEWQELCRPINCPPIDDECMPG
PYTQDPDEACYLYEYHSPLSAGRRR
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