prot_H-elongata_contig46281.11714.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46281.11714.1
Unique Nameprot_H-elongata_contig46281.11714.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: A0A6H5KD38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD38_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 8.830e-30
Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    1 MSSDGWDIRMVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAG 80
            MS+DGWDI+++N PANSPD N L+L FF S+QSLQDRT   + D+ V   K AW+E+PP VLN VWLSL  CLEQIMLAG
Sbjct:    1 MSADGWDIQLINQPANSPDKNVLDLGFFNSIQSLQDRTTPTSIDDLVGAEKDAWNEDPPVVLNRVWLSLQPCLEQIMLAG 80          
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.960e-25
Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    3 SDGWDIRMVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYNLPHLRKDMLENAG 99
            +DGWDIR++N P+NSPDTN L+L FF +VQSLQDR   +  DE +  VK A++E  P   + VW+SL A L QI+LA G+N + LPHL+KD   N+G
Sbjct:  175 ADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAIL-QIILAKGNNTFKLPHLKKDNAANSG 270          
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: A0A6H5JRC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC0_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 2.030e-23
Identity = 47/84 (55.95%), Postives = 56/84 (66.67%), Query Frame = 0
Query:   17 SPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYNLPHLRKDMLENAGT 100
            SPDTN L+L FF S+QSLQDR K +  D+ V  V+ AW++  PD L  VW SL ACLEQ +L GGDN Y + HL KD    AGT
Sbjct:    2 SPDTNILDLGFFASIQSLQDRYKPRTIDDLVGEVETAWEKASPDKLGKVWTSLQACLEQTLLCGGDNTYKVSHLSKDKAARAGT 85          
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: A0A0A9BDH3_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9BDH3_ARUDO)

HSP 1 Score: 97.4 bits (241), Expect = 2.040e-23
Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    4 DGWDIRMVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYNLPHLRKDMLENAG 99
            DG+DIR+V  PANSPD N L+L FF S+QS+Q +T  K  +E V  V  A++E      N ++L+L  CL +IM  GG+N YN+PH+RK MLE  G
Sbjct:   64 DGFDIRIVCQPANSPDLNILDLGFFNSLQSIQQKTTCKTKEELVAAVDKAFEEYQVSKANRIFLTLHGCLNEIMRIGGNNSYNIPHIRKAMLERQG 159          
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08)

HSP 1 Score: 100 bits (250), Expect = 6.170e-23
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 0
Query:    2 SSDGWDIRMVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYNLPHLRKDMLENAG 99
            +SDG+ I ++  P NSPDTN L+L FFR++QSLQ +   +N DE V+ V  A++E  P  LN V+LSL ACL QI+   GDN Y +PH+ KD LE  G
Sbjct:  314 NSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTG 411          
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: A0A6H5JEL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL2_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 8.440e-23
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 0
Query:   10 MVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYN-LPHL 90
            + NHP NSPDTN L+L FF S+QSLQDR K +  D+ V   + AW++  PD L  VW SL ACLEQ +L GGDN Y  LPHL
Sbjct:   82 LCNHPPNSPDTNILDLGFFASIQSLQDRYKPRTIDDLVGEAETAWEKASPDKLGKVWTSLQACLEQTLLCGGDNTYKVLPHL 163          
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: UPI001C25248E (uncharacterized protein LOC121754342 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25248E)

HSP 1 Score: 97.4 bits (241), Expect = 8.730e-23
Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 0
Query:    2 SSDGWDIRMVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYNLPHLRKDMLE 96
            +SDG+ I ++  P NSPDTN L+L FFR++QSLQ     +  DE V+ V  A++E  P  LN V+LSL ACL QI+   GDN Y LPH+ KD LE
Sbjct:  107 NSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHEKPCRGVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILKFKGDNHYKLPHMNKDRLE 201          
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 98.6 bits (244), Expect = 1.960e-22
Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 0
Query:    2 SSDGWDIRMVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYNLPHLRKDMLENAGT 100
            S DG+DIR++  P NSPD N L+L FFRS+Q LQ        +E V  VK ++DE P + LN V+L+   C+++IM   GDNDY +PH+ KD LE  GT
Sbjct:  240 SKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGT 338          
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: A0A0A9QJP6_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9QJP6_ARUDO)

HSP 1 Score: 91.7 bits (226), Expect = 1.420e-21
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    4 DGWDIRMVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYNLPHLRKDMLENAG 99
            DG+DI +V  PANSPD N L+L FF+S+QS+Q +T  K  +E V   + A++E      N ++L++  C++++M  GG N YN+PH+RK MLE  G
Sbjct:   26 DGFDIGIVCQPANSPDLNILDLGFFKSIQSIQQKTSCKTKEELVAAFEKAFEEYSVSQGNRIFLTVNGCMKEVMKIGGGNGYNIPHIRKGMLERQG 121          
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Match: UPI000DF4E7C4 (uncharacterized protein LOC112889894 n=1 Tax=Panicum hallii TaxID=206008 RepID=UPI000DF4E7C4)

HSP 1 Score: 96.7 bits (239), Expect = 2.660e-21
Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    4 DGWDIRMVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVVKVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYNLPHLRKDMLE 96
            DG+DIR++  PANSPD N  +L FF S+QS+Q +T SK+ +E V  V  A+ + PP  LN ++LS  AC+ +++  GG N+Y +PH+RK +LE
Sbjct:  381 DGFDIRLMLQPANSPDLNICDLGFFNSIQSIQYKTSSKSTEELVSAVLEAFADYPPSKLNRIFLSFHACMNEVIKIGGGNEYKVPHIRKGVLE 473          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46281.11714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD38_9PHAE8.830e-3065.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGY9_9PHAE1.960e-2553.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRC0_9PHAE2.030e-2355.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0A9BDH3_ARUDO2.040e-2350.00Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]
UPI0020091A086.170e-2351.02uncharacterized protein LOC125206097 n=1 Tax=Salvi... [more]
A0A6H5JEL2_9PHAE8.440e-2357.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001C25248E8.730e-2351.58uncharacterized protein LOC121754342 n=1 Tax=Salvi... [more]
UPI0007F012D11.960e-2248.48uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
A0A0A9QJP6_ARUDO1.420e-2144.79Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]
UPI000DF4E7C42.660e-2147.31uncharacterized protein LOC112889894 n=1 Tax=Panic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.470coord: 3..85
e-value: 4.5E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 3..99
NoneNo IPR availablePANTHERPTHR47169:SF1coord: 3..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46281contigH-elongata_contig46281:1021..1320 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46281.11714.1mRNA_H-elongata_contig46281.11714.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46281 998..1320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46281.11714.1 ID=prot_H-elongata_contig46281.11714.1|Name=mRNA_H-elongata_contig46281.11714.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
MSSDGWDIRMVNHPANSPDTNALNLFFFRSVQSLQDRTKSKNADEQVQVV
KVAWDENPPDVLNGVWLSLPACLEQIMLAGGDNDYNLPHLRKDMLENAGT
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