prot_H-elongata_contig46281.11713.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46281.11713.1
Unique Nameprot_H-elongata_contig46281.11713.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 9.990e-12
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 0
Query:   42 MFLGVIGRQRCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVTETVEVTK 96
            MFL  + R R +TS+  +F GK+G++PFT Q  AQRNSRNRAAGT  T+ VEVTK
Sbjct:    1 MFLAAVARPRYDTSRRCNFTGKLGIFPFTVQRPAQRNSRNRAAGTMETKCVEVTK 55          
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 3.660e-11
Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   42 MFLGVIGRQRCNTSQNADFGGKIGVYPFT----EQVQAQRNSRNRAAGTTVTETVEVTK 96
            MFL  + R R ++S+N  F GKIG+YPFT     Q  AQRNSRNRAAGT VT +VEV +
Sbjct:    1 MFLAAVARPRFDSSRNRHFDGKIGIYPFTVQRAAQRAAQRNSRNRAAGTIVTRSVEVNR 59          
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: UPI000E6FC8C0 (uncharacterized protein LOC113311561 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC8C0)

HSP 1 Score: 65.5 bits (158), Expect = 4.160e-10
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0
Query:   40 EVMFLGVIGRQRCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVT-ETVEVTK 96
            +VMFL V+ R R +++ N +F GKIG++PFT Q  AQRNS+NR AGT  T E + VTK
Sbjct:   42 KVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKEILSVTK 99          
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: UPI000E6FC7BC (uncharacterized protein LOC113359119 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC7BC)

HSP 1 Score: 65.1 bits (157), Expect = 4.190e-10
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 0
Query:   40 EVMFLGVIGRQRCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVTETV-EVTK 96
            +VMFL V+ R R +++ N +F GKIG++PFT Q  AQRNS+NR AGT  T+ +  VTK
Sbjct:   29 KVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKAILSVTK 86          
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: W4HD18_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HD18_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 5.320e-10
Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 0
Query:   24 KTSRSITCSTARLPQAEVMFLGVIGRQRCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVTETVEVT 95
            +T R  +C + +L   +VMFL  + R R +  +++DF G IG++PF EQ+ A  NSRNR AGT VT+ V VT
Sbjct:   92 ETPRRRSCKS-KLFLPKVMFLAAVARPRWDIDRDSDFDGNIGMWPFVEQLPAAPNSRNRHAGTMVTQLVAVT 162          
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: H3GF36_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GF36_PHYRM)

HSP 1 Score: 63.9 bits (154), Expect = 1.350e-9
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   41 VMFLGVIGRQRCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVTETVEVTK 96
            VMFL  +GR R + S +  F GK+G++PF EQV AQR+S  R AGT +T+ + VTK
Sbjct:  149 VMFLSAVGRPRYDPSTHQVFDGKLGIWPFVEQVPAQRSSARRPAGTIITKEISVTK 204          
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: A0A3L6VGG5_9STRA (HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VGG5_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.140e-9
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   40 EVMFLGVIGRQRCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVTETVEVT 95
            +VM L  + R + ++S N  F GKIG + FTEQV AQRNSRNR AGT VT+ V VT
Sbjct:  147 KVMLLAAVMRPQWDSSGNCIFDGKIGFWAFTEQVPAQRNSRNRPAGTLVTKCVNVT 202          
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: UPI000E6FD0CA (uncharacterized protein LOC113359240 n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FD0CA)

HSP 1 Score: 62.0 bits (149), Expect = 8.040e-9
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   40 EVMFLGVIGRQRCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVTETV-EVTK 96
            +VMFL V+ R R +++ N +F GKIG++ FT Q  AQRNS+NR AGT  T+ +  VTK
Sbjct:  145 KVMFLAVVARPRYDSANNEEFSGKIGIFSFTFQEPAQRNSKNRTAGTMETKAILSVTK 202          
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: UPI000B8B71D0 (uncharacterized protein LOC110801945 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B71D0)

HSP 1 Score: 61.6 bits (148), Expect = 1.250e-8
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   40 EVMFLGVIGRQRCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVTETVEVTKPEQ 99
            +VMF   + R R N+     F GK+G++PFT Q +A+RNS+NR  GT VT+ VE  + E+
Sbjct:   67 KVMFTAAVARPRFNSQNECTFDGKLGIFPFTYQEEAKRNSKNRDKGTMVTKAVESVRKEE 126          
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Match: UPI000B8B1CFF (uncharacterized protein LOC110777199 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B1CFF)

HSP 1 Score: 59.7 bits (143), Expect = 2.630e-8
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   40 EVMFLGVIGRQRCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVTETVEVTKPEQ 99
            +VMF   + R R N      F GK+G++PFT Q  A+RNS+NR  GT VT+ VE  + E+
Sbjct:  100 KVMFTAAVARPRFNAQNECIFDGKLGIFPFTYQEAAKRNSKNREKGTMVTKVVESVRKEE 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46281.11713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGY9_9PHAE9.990e-1260.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRZ6_9PHAE3.660e-1157.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000E6FC8C04.160e-1055.17uncharacterized protein LOC113311561 n=1 Tax=Papav... [more]
UPI000E6FC7BC4.190e-1053.45uncharacterized protein LOC113359119 n=1 Tax=Papav... [more]
W4HD18_9STRA5.320e-1045.83Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
H3GF36_PHYRM1.350e-951.79Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A3L6VGG5_9STRA2.140e-957.14HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Ap... [more]
UPI000E6FD0CA8.040e-951.72uncharacterized protein LOC113359240 n=2 Tax=Papav... [more]
UPI000B8B71D01.250e-845.00uncharacterized protein LOC110801945 n=1 Tax=Spina... [more]
UPI000B8B1CFF2.630e-845.00uncharacterized protein LOC110777199 n=1 Tax=Spina... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 40..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46281contigH-elongata_contig46281:519..887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46281.11713.1mRNA_H-elongata_contig46281.11713.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46281 2..887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46281.11713.1 ID=prot_H-elongata_contig46281.11713.1|Name=mRNA_H-elongata_contig46281.11713.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
MALQCAIRVIDHQSHWTGSSGTAKTSRSITCSTARLPQAEVMFLGVIGRQ
RCNTSQNADFGGKIGVYPFTEQVQAQRNSRNRAAGTTVTETVEVTKPEQG
HRHNGYQDSGGNQGEVQKDDDRP
back to top