prot_H-elongata_contig46266.11709.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46266.11709.1
Unique Nameprot_H-elongata_contig46266.11709.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length362
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46266.11709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 236..269
e-value: 1.2E-4
score: 22.1
coord: 185..225
e-value: 4.6E-7
score: 29.9
coord: 272..313
e-value: 2.5E-4
score: 21.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 156..343
e-value: 8.9E-9
score: 36.2
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 90..195
coord: 156..323
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 156..323
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 90..195
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 86..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46266contigH-elongata_contig46266:989..2233 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46266.11709.1mRNA_H-elongata_contig46266.11709.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46266 989..2233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46266.11709.1 ID=prot_H-elongata_contig46266.11709.1|Name=mRNA_H-elongata_contig46266.11709.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=362bp
RVFLLSEYDRGAGPPWLGSTKHLSVASLHTCEECRMVAALHVRIADNTPR
SLWATRENHDGPKFRSATAGDLGNASVVTIKASRVPAARVVKITWDKLSP
VRAVTWPPDLLELSFGRCFDRPIDGVKWPRTLQRLIFGHAFSQSCSGIVW
PGAILELIFGHEYNHPITEIAWPTSLKRLSFGRKFNQSIDGVCWPPALTK
LTLGWSFDQSLKEVALPSTLEVLSIAGVYDRPLDFAFPARLKKLTLGGHF
NQPLGAIQWPDQLEEISFGWAFNQSLAEVTWPPKLLKLSLGYRFNQPAAH
IRWPQTLRELDLGVFSRQSLEGIVWPQSFRTLLVSRAFDLTGVVLPKEGR
VCRRGHTYCNVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf