prot_H-elongata_contig4623.11706.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4623.11706.1
Unique Nameprot_H-elongata_contig4623.11706.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length370
Homology
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A438JMN5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JMN5_VITVI)

HSP 1 Score: 246 bits (629), Expect = 1.110e-73
Identity = 146/377 (38.73%), Postives = 220/377 (58.36%), Query Frame = 0
Query:    2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGA--VGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADE------PRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
            G +E++K RLVA+GF Q +G+ Y + +SP     S+R+ +A  A  D EL   D +   L   +DE++Y+E PE + K      V +L K+IYGL QA R W  KF   +   GF++   D C++ KV  G   + ++++VDDIL  + D   +      L + F + DMG+A Y +   I R+R    L ++Q  Y++ ++E+F+++     S +SG+  + K D+      PRN  E+E+M+K PY  AVG+LM+  T TR DI+ A   + R+  +PG  H KA  K+M+YL  TKD+ +TY  +   L +  Y+DSD+G CLD+ +S SG V MLA GAISW +  Q +TAS T+EAE VA  +A    L+LR
Sbjct:   52 GNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENILDQCIYLKV-SGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEANYVISIEIFRDRSRGVLGLSQKGYIDRVLERFNMQ-----SCSSGIAPILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLR 421          
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A438IPK0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IPK0_VITVI)

HSP 1 Score: 248 bits (632), Expect = 6.000e-72
Identity = 146/377 (38.73%), Postives = 221/377 (58.62%), Query Frame = 0
Query:    2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGA--VGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADE------PRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
            G +E++K RLVA+GF Q +G+ Y + +SP     S+R+ +A  A  D EL   D +   L   +DE++Y+E PE + K      V +L K+IYGL QA R W  KF   +   GF++   D C++ KV  G   + ++++VDDIL  + D   +      L + F + DMG+A Y +G  I R+R    L ++Q  Y++ ++E+F+++     S +SG+  + K D+      PRN  E+E+++K PY  AVG+LM+  T TR DI+ A   + R+  +PG  H KA  K+M+YL  TKD+ +TY  +   L +  Y+DSD+G CLD+ +S SG V MLA GAISW +  Q +TAS T+EAE VA  +A    L+LR
Sbjct:  293 GNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKV-SGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQ-----SCSSGIAPILKGDKLSKMQCPRNNIEREQIKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLR 662          
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR)

HSP 1 Score: 241 bits (616), Expect = 8.510e-72
Identity = 140/366 (38.25%), Postives = 217/366 (59.29%), Query Frame = 0
Query:    1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFS--GAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERK--ISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDA 362
            DGKVE YK RLVA+G+ Q +G+ Y E +SP     SIR+ LA AA  D E+   D +   L  ++ EE+Y+  PE +   S    V +L ++IYGL QA R WN +F   +    F + + +PC+++K+  G + + +V++VDDIL    D  ++    V L ++F +KD+G+A Y +G  I R+R  R L ++Q +Y+++++++++++K ++  +    GV +LS+ + P+  EE+E M + PY  AVGA+M+T T TR D+A A    +R+  NPG  H K V  I++YL  TKD  + YG     L ++ YTD+ F    D  +SISG V  L  GAISW +  Q   A  T EAE +A S+A
Sbjct:  150 DGKVETYKARLVAKGYRQKEGIDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEEVYMTQPEGFTSLSDHNKVCKLQRSIYGLKQASRSWNIRFNNTIEKFNFVKCEEEPCVYKKI-SGSSIIFLVLYVDDILLFGNDIPSMQSTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGV-SLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGNSE--LSLKGYTDASFASDKDDSKSISGYVFTLNGGAISWKSSKQATVADSTTEAEYIAASEA 511          
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA)

HSP 1 Score: 243 bits (619), Expect = 2.190e-71
Identity = 146/380 (38.42%), Postives = 219/380 (57.63%), Query Frame = 0
Query:    2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPE---------EYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVP--TLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
            G+V +YK RLVA+G+ Q  G+ Y E YSP     S+R  LA   A+  E+   D +   L  +++EE+Y+E+PE         E +     V  L +++YGL QA R WN      +   GFE   ADPC++ +  +GE E +V ++VDD+L  ++ KA I      + +KF++KD+G AR+ +G  I  + + R L I+Q  Y ES+++KF  ++  K   T   P   L+KADEP+  E+K +M+  PY   VG+LM+    TR DI+ A   ++RF ENPG  H  A +K+++YLL TKD GI Y G   G   EAY+D+D+    D RRS+SG + ML    + W +  Q+  A  + EAE +ALSD VK+ +++R
Sbjct:  124 GQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFG-QENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMR 500          
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 6.400e-71
Identity = 141/370 (38.11%), Postives = 215/370 (58.11%), Query Frame = 0
Query:    1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
            +GK++ +K RLVA+GF Q+  V Y    SP P +ASI++ LA A  K   L H+D +Q    A +DEE+++++P      S  + +  +AIYGL Q+GR W       +   GFEQ KADPC+FRK+VD    +++V++VDDIL    D+   +     L +KF  K++G+ +++ GC I R+ +A  L+I+Q  Y++SMVE+FDVK   +I AT G     K        E EE  ++P  EA+G++MW +T +R D++ A R VAR    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ +    D RRS+SG    +    +S  ++ Q + +  + EAE +A  + VK+ LF+R
Sbjct:  795 EGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVR 1154          
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 9.710e-71
Identity = 141/370 (38.11%), Postives = 215/370 (58.11%), Query Frame = 0
Query:    1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
            +GK++ +K RLVA+GF Q+  V Y    SP P +ASI++ LA A  K   L H+D +Q    A +DEE+++++P      S  + +  +AIYGL Q+GR W       +   GFEQ KADPC+FRK+VD    +++V++VDDIL    D+   +     L +KF  K++G+ +++ GC I R+ +A  L+I+Q  Y++SMVE+FDVK   +I AT G     K        E EE  ++P  EA+G++MW +T +R D++ A R VAR    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ +    D RRS+SG    +    +S  ++ Q + +  + EAE +A  + VK+ LF+R
Sbjct: 1174 EGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVR 1533          
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 9.820e-71
Identity = 141/370 (38.11%), Postives = 215/370 (58.11%), Query Frame = 0
Query:    1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
            +GK++ +K RLVA+GF Q+  V Y    SP P +ASI++ LA A  K   L H+D +Q    A +DEE+++++P      S  + +  +AIYGL Q+GR W       +   GFEQ KADPC+FRK+VD    +++V++VDDIL    D+   +     L +KF  K++G+ +++ GC I R+ +A  L+I+Q  Y++SMVE+FDVK   +I AT G     K        E EE  ++P  EA+G++MW +T +R D++ A R VAR    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ +    D RRS+SG    +    +S  ++ Q + +  + EAE +A  + VK+ LF+R
Sbjct: 1194 EGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVR 1553          
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 9.930e-71
Identity = 141/370 (38.11%), Postives = 215/370 (58.11%), Query Frame = 0
Query:    1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
            +GK++ +K RLVA+GF Q+  V Y    SP P +ASI++ LA A  K   L H+D +Q    A +DEE+++++P      S  + +  +AIYGL Q+GR W       +   GFEQ KADPC+FRK+VD    +++V++VDDIL    D+   +     L +KF  K++G+ +++ GC I R+ +A  L+I+Q  Y++SMVE+FDVK   +I AT G     K        E EE  ++P  EA+G++MW +T +R D++ A R VAR    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ +    D RRS+SG    +    +S  ++ Q + +  + EAE +A  + VK+ LF+R
Sbjct: 1337 EGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVR 1696          
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.170e-70
Identity = 148/380 (38.95%), Postives = 223/380 (58.68%), Query Frame = 0
Query:    2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPE---EYQKFSGAVGR------LNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVP--TLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
            G+V +YK RLVA+G+ Q  G+ Y E YSP     SIR  LA  +A+  E+   D +   L  K++EE+Y+E+ E   E  + + A G       L +++YGL QA R WN      +  +GFE    DPC++ +  +GE E +V ++VDD+L  ++ KA I      + +KF++KDMG AR+ +G  I  + + R L I+Q  Y ES+++KF  ++  K   T   P   L+KADEP+  E+K +M+  PY   VG+LM+ +  TR DI+ A   ++RF ENPG  H  A +K+++YLL TKD GI Y G   G  +EAY+D+D+    D RRS+SG + ML    + W +  Q+  A  + EAE +ALSD VK+ +++R
Sbjct:  189 GQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFG-QENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNWDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMR 565          
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A438DUF5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DUF5_VITVI)

HSP 1 Score: 249 bits (636), Expect = 1.770e-70
Identity = 146/377 (38.73%), Postives = 222/377 (58.89%), Query Frame = 0
Query:    2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGA--VGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADE------PRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
            G +E++K RLVA+GF Q +G+ Y + +SP     S+R+ +A  A  D EL   D +   L   +DE++Y+E PE + K      V +L K+IYGL QA R W  KF   +   GF++   D C++ KV  G   + ++++VDD+L  + D   +      L + F + DMG+A+Y +G  I R+R    L ++Q  Y++ ++E+F+++     S +SG+  + K D+      PRN  E+E+M+K PY  AVG+LM+  T TR DI+ A   + R+  +PG  H KA  K+M+YL  TKD+ +TY  +   L +  Y+DSD+G CLD+ +S SG V MLA GAISW +  Q +TAS T+EAE VA  +A    L+LR
Sbjct:  811 GNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFTKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKV-SGSKFIFLILYVDDVLLASSDLGLLRETKEYLSKNFHMVDMGEAKYVIGIEIFRDRTRGVLGLSQKGYIDRVLERFNMQ-----SCSSGIAPILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLR 1180          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438JMN5_VITVI1.110e-7338.73Retrovirus-related Pol polyprotein from transposon... [more]
A0A438IPK0_VITVI6.000e-7238.73Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3MAN7_TRIPR8.510e-7238.25Retrotransposon protein putative Ty1-copia subclas... [more]
A0A6A3Q908_9STRA2.190e-7138.42Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KSG8_9PHAE6.400e-7138.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE9.710e-7138.11Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE9.820e-7138.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE9.930e-7138.11Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6A3DSS8_9STRA1.170e-7038.95Retrovirus-related Pol polyprotein from transposon... [more]
A0A438DUF5_VITVI1.770e-7038.73Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..210
e-value: 1.8E-44
score: 152.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4623contigH-elongata_contig4623:7780..8889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4623.11706.1mRNA_H-elongata_contig4623.11706.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4623 7780..8889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4623.11706.1 ID=prot_H-elongata_contig4623.11706.1|Name=mRNA_H-elongata_contig4623.11706.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=370bp
DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGE
LRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGAVGRLNKAIYGLVQAGRC
WNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDK
ATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESM
VEKFDVKKERKISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMW
TTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGG
QGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASG
TLEAEDVALSDAVKDVLFLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2