prot_H-elongata_contig4623.11706.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A438JMN5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JMN5_VITVI) HSP 1 Score: 246 bits (629), Expect = 1.110e-73 Identity = 146/377 (38.73%), Postives = 220/377 (58.36%), Query Frame = 0
Query: 2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGA--VGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADE------PRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
G +E++K RLVA+GF Q +G+ Y + +SP S+R+ +A A D EL D + L +DE++Y+E PE + K V +L K+IYGL QA R W KF + GF++ D C++ KV G + ++++VDDIL + D + L + F + DMG+A Y + I R+R L ++Q Y++ ++E+F+++ S +SG+ + K D+ PRN E+E+M+K PY AVG+LM+ T TR DI+ A + R+ +PG H KA K+M+YL TKD+ +TY + L + Y+DSD+G CLD+ +S SG V MLA GAISW + Q +TAS T+EAE VA +A L+LR
Sbjct: 52 GNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENILDQCIYLKV-SGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEANYVISIEIFRDRSRGVLGLSQKGYIDRVLERFNMQ-----SCSSGIAPILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLR 421
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A438IPK0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IPK0_VITVI) HSP 1 Score: 248 bits (632), Expect = 6.000e-72 Identity = 146/377 (38.73%), Postives = 221/377 (58.62%), Query Frame = 0
Query: 2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGA--VGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADE------PRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
G +E++K RLVA+GF Q +G+ Y + +SP S+R+ +A A D EL D + L +DE++Y+E PE + K V +L K+IYGL QA R W KF + GF++ D C++ KV G + ++++VDDIL + D + L + F + DMG+A Y +G I R+R L ++Q Y++ ++E+F+++ S +SG+ + K D+ PRN E+E+++K PY AVG+LM+ T TR DI+ A + R+ +PG H KA K+M+YL TKD+ +TY + L + Y+DSD+G CLD+ +S SG V MLA GAISW + Q +TAS T+EAE VA +A L+LR
Sbjct: 293 GNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKV-SGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQ-----SCSSGIAPILKGDKLSKMQCPRNNIEREQIKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLR 662
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR) HSP 1 Score: 241 bits (616), Expect = 8.510e-72 Identity = 140/366 (38.25%), Postives = 217/366 (59.29%), Query Frame = 0
Query: 1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFS--GAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERK--ISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDA 362
DGKVE YK RLVA+G+ Q +G+ Y E +SP SIR+ LA AA D E+ D + L ++ EE+Y+ PE + S V +L ++IYGL QA R WN +F + F + + +PC+++K+ G + + +V++VDDIL D ++ V L ++F +KD+G+A Y +G I R+R R L ++Q +Y+++++++++++K ++ + GV +LS+ + P+ EE+E M + PY AVGA+M+T T TR D+A A +R+ NPG H K V I++YL TKD + YG L ++ YTD+ F D +SISG V L GAISW + Q A T EAE +A S+A
Sbjct: 150 DGKVETYKARLVAKGYRQKEGIDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEEVYMTQPEGFTSLSDHNKVCKLQRSIYGLKQASRSWNIRFNNTIEKFNFVKCEEEPCVYKKI-SGSSIIFLVLYVDDILLFGNDIPSMQSTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGV-SLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGNSE--LSLKGYTDASFASDKDDSKSISGYVFTLNGGAISWKSSKQATVADSTTEAEYIAASEA 511
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 243 bits (619), Expect = 2.190e-71 Identity = 146/380 (38.42%), Postives = 219/380 (57.63%), Query Frame = 0
Query: 2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPE---------EYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVP--TLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
G+V +YK RLVA+G+ Q G+ Y E YSP S+R LA A+ E+ D + L +++EE+Y+E+PE E + V L +++YGL QA R WN + GFE ADPC++ + +GE E +V ++VDD+L ++ KA I + +KF++KD+G AR+ +G I + + R L I+Q Y ES+++KF ++ K T P L+KADEP+ E+K +M+ PY VG+LM+ TR DI+ A ++RF ENPG H A +K+++YLL TKD GI Y G G EAY+D+D+ D RRS+SG + ML + W + Q+ A + EAE +ALSD VK+ +++R
Sbjct: 124 GQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFG-QENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMR 500
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 250 bits (639), Expect = 6.400e-71 Identity = 141/370 (38.11%), Postives = 215/370 (58.11%), Query Frame = 0
Query: 1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
+GK++ +K RLVA+GF Q+ V Y SP P +ASI++ LA A K L H+D +Q A +DEE+++++P S + + +AIYGL Q+GR W + GFEQ KADPC+FRK+VD +++V++VDDIL D+ + L +KF K++G+ +++ GC I R+ +A L+I+Q Y++SMVE+FDVK +I AT G K E EE ++P EA+G++MW +T +R D++ A R VAR P H A+ KI+ YL T+D GITY +G GL + Y D+ + D RRS+SG + +S ++ Q + + + EAE +A + VK+ LF+R
Sbjct: 795 EGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVR 1154
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 250 bits (639), Expect = 9.710e-71 Identity = 141/370 (38.11%), Postives = 215/370 (58.11%), Query Frame = 0
Query: 1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
+GK++ +K RLVA+GF Q+ V Y SP P +ASI++ LA A K L H+D +Q A +DEE+++++P S + + +AIYGL Q+GR W + GFEQ KADPC+FRK+VD +++V++VDDIL D+ + L +KF K++G+ +++ GC I R+ +A L+I+Q Y++SMVE+FDVK +I AT G K E EE ++P EA+G++MW +T +R D++ A R VAR P H A+ KI+ YL T+D GITY +G GL + Y D+ + D RRS+SG + +S ++ Q + + + EAE +A + VK+ LF+R
Sbjct: 1174 EGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVR 1533
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 250 bits (639), Expect = 9.820e-71 Identity = 141/370 (38.11%), Postives = 215/370 (58.11%), Query Frame = 0
Query: 1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
+GK++ +K RLVA+GF Q+ V Y SP P +ASI++ LA A K L H+D +Q A +DEE+++++P S + + +AIYGL Q+GR W + GFEQ KADPC+FRK+VD +++V++VDDIL D+ + L +KF K++G+ +++ GC I R+ +A L+I+Q Y++SMVE+FDVK +I AT G K E EE ++P EA+G++MW +T +R D++ A R VAR P H A+ KI+ YL T+D GITY +G GL + Y D+ + D RRS+SG + +S ++ Q + + + EAE +A + VK+ LF+R
Sbjct: 1194 EGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVR 1553
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 250 bits (639), Expect = 9.930e-71 Identity = 141/370 (38.11%), Postives = 215/370 (58.11%), Query Frame = 0
Query: 1 DGKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGAVGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
+GK++ +K RLVA+GF Q+ V Y SP P +ASI++ LA A K L H+D +Q A +DEE+++++P S + + +AIYGL Q+GR W + GFEQ KADPC+FRK+VD +++V++VDDIL D+ + L +KF K++G+ +++ GC I R+ +A L+I+Q Y++SMVE+FDVK +I AT G K E EE ++P EA+G++MW +T +R D++ A R VAR P H A+ KI+ YL T+D GITY +G GL + Y D+ + D RRS+SG + +S ++ Q + + + EAE +A + VK+ LF+R
Sbjct: 1337 EGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVR 1696
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA) HSP 1 Score: 242 bits (618), Expect = 1.170e-70 Identity = 148/380 (38.95%), Postives = 223/380 (58.68%), Query Frame = 0
Query: 2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPE---EYQKFSGAVGR------LNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVP--TLSKADEPRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
G+V +YK RLVA+G+ Q G+ Y E YSP SIR LA +A+ E+ D + L K++EE+Y+E+ E E + + A G L +++YGL QA R WN + +GFE DPC++ + +GE E +V ++VDD+L ++ KA I + +KF++KDMG AR+ +G I + + R L I+Q Y ES+++KF ++ K T P L+KADEP+ E+K +M+ PY VG+LM+ + TR DI+ A ++RF ENPG H A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRS+SG + ML + W + Q+ A + EAE +ALSD VK+ +++R
Sbjct: 189 GQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFG-QENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNWDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMR 565
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Match: A0A438DUF5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DUF5_VITVI) HSP 1 Score: 249 bits (636), Expect = 1.770e-70 Identity = 146/377 (38.73%), Postives = 222/377 (58.89%), Query Frame = 0
Query: 2 GKVEKYKCRLVAQGFWQVKGVHYTEKYSPTPPTASIRVFLATAAAKDGELRHFDAEQTSLKAKIDEELYIEIPEEYQKFSGA--VGRLNKAIYGLVQAGRCWNNKFCGDMAVIGFEQGKADPCMFRKVVDGEAEVVVVVHVDDILAHAKDKATIDRFAVELGQKFKLKDMGDARYYMGCHITRNRKARELKINQHLYVESMVEKFDVKKERKISATSGVPTLSKADE------PRNPEEKEEMRKFPYGEAVGALMWTTTMTRQDIASAARTVARFCENPGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSISGTVCMLAKGAISWYARVQEVTASGTLEAEDVALSDAVKDVLFLR 370
G +E++K RLVA+GF Q +G+ Y + +SP S+R+ +A A D EL D + L +DE++Y+E PE + K V +L K+IYGL QA R W KF + GF++ D C++ KV G + ++++VDD+L + D + L + F + DMG+A+Y +G I R+R L ++Q Y++ ++E+F+++ S +SG+ + K D+ PRN E+E+M+K PY AVG+LM+ T TR DI+ A + R+ +PG H KA K+M+YL TKD+ +TY + L + Y+DSD+G CLD+ +S SG V MLA GAISW + Q +TAS T+EAE VA +A L+LR
Sbjct: 811 GNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFTKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKV-SGSKFIFLILYVDDVLLASSDLGLLRETKEYLSKNFHMVDMGEAKYVIGIEIFRDRTRGVLGLSQKGYIDRVLERFNMQ-----SCSSGIAPILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLR 1180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4623.11706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig4623.11706.1 ID=prot_H-elongata_contig4623.11706.1|Name=mRNA_H-elongata_contig4623.11706.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=370bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|