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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 193..226
e-value: 110.0
score: 6.0
coord: 151..184
e-value: 0.25
score: 20.4
coord: 109..142
e-value: 8.6
score: 15.3
coord: 319..353
e-value: 310.0
score: 1.9
coord: 362..395
e-value: 82.0
score: 6.9
coord: 25..58
e-value: 0.55
score: 19.3
coord: 235..268
e-value: 12.0
score: 14.4
coord: 67..100
e-value: 120.0
score: 5.5 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 1..105
e-value: 5.8E-18
score: 67.1 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 106..261
e-value: 2.2E-50
score: 173.4 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 262..418
e-value: 1.4E-44
score: 154.3 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 332..416 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 1..225 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 230..330 |
| None | No IPR available | PFAM | PF13374 | TPR_10 | coord: 192..233
e-value: 0.001
score: 18.9 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 234..309
e-value: 1.8E-18
score: 66.6
coord: 108..182
e-value: 5.8E-20
score: 71.4
coord: 1..57
e-value: 3.2E-8
score: 33.8
coord: 331..387
e-value: 3.8E-12
score: 46.3 |
| None | No IPR available | PANTHER | PTHR45783 | FAMILY NOT NAMED | coord: 77..179
coord: 179..284
coord: 104..258
coord: 346..412 |
| None | No IPR available | PANTHER | PTHR45783:SF6 | KINESIN LIGHT CHAIN 4 | coord: 77..179
coord: 104..258
coord: 346..412 |
| None | No IPR available | PANTHER | PTHR45783 | FAMILY NOT NAMED | coord: 261..385 |
| None | No IPR available | PANTHER | PTHR45783:SF6 | KINESIN LIGHT CHAIN 4 | coord: 179..284 |
| None | No IPR available | PANTHER | PTHR45783 | FAMILY NOT NAMED | coord: 2..91 |
| None | No IPR available | PANTHER | PTHR45783:SF6 | KINESIN LIGHT CHAIN 4 | coord: 2..91
coord: 261..385 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 25..268
score: 10.136 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig462.11701.1 ID=prot_H-elongata_contig462.11701.1|Name=mRNA_H-elongata_contig462.11701.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=418bp
QAEPLYSRAKTILGRNVGPDHQNMAAVLNNLAGLLYRQAKYVDAEQLYLR
VSEIAEKNLGPQDPIMAYIFSNRASLLRARARYVEAGTLYERANKICEQF
VGPEAPNTATVLNNWAELLRLQGKYAEAEPLCARSQAIREAVLGPEHPHV
ADSLINRAELFREQGKYAEAEPLYERSQTIREIALGLEHPDVAQSLHYRG
GLLLQQGKYAEAALLNERSQAIREKMLDAAHPELAEALHNHASIFHAQGN
FTEAEPLYIRSLSILERTLGPDHPDSAIAASNHAVWLHQLGRRSEAEPLH
KRSQAIREKVLGPHHPDVAHSLRNRAVWLACENEMYEEAEALYIRALSIY
GDAFGRDHPWVATLLDGRAWILCQQGREAEAESLYERLQIIKEESLGPEH
LEVAQLLNNWAMSMYRQV back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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