prot_H-elongata_contig46098.11687.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46098.11687.1
Unique Nameprot_H-elongata_contig46098.11687.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length253
Homology
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BLAST of mRNA_H-elongata_contig46098.11687.1 vs. uniprot
Match: A0A6H5JV94_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV94_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 1.090e-68
Identity = 132/198 (66.67%), Postives = 152/198 (76.77%), Query Frame = 0 
Query:    1 MAPGVARLYASAVRGCGRERDAVALVQALRCRDPSLGWCTDEIARWELFRGLVEEGKKLASAGGHNSAVGVFTQQVLEAESTCVVPNAEAFCFRGSSRLGQGKALEALDDCYRALSLLSLE-VGRGGGTGGCDPLVGP---FASARGMALLVRGRAYMALSRIGESISDLKGSLKCNPGLTE-ASEYLRQAEQRQAEA 193
            MAPGVARLYASA+RGCGR+ +A+ +VQALRCRDPSL WC ++ A W+    L  EG++LA+ G H  A   FTQ VLEA+  CVVP+AEAFC RGS RLG+GKALEALDDCYRALSLLSLE V  G  T       G    FASARGMALLVRGRAY+ALSR+GE+I DL+G  KCNPGL E A +YLR+AEQRQAEA
Sbjct:  691 MAPGVARLYASALRGCGRQHEALPVVQALRCRDPSLAWCVEDGACWDRAGRLTVEGERLAAGGDHAKAAEAFTQ-VLEADPGCVVPSAEAFCHRGSCRLGEGKALEALDDCYRALSLLSLEGVXXGQRTAAXXXXXGAAEAFASARGMALLVRGRAYLALSRLGEAIGDLRGCSKCNPGLEEDALKYLREAEQRQAEA 887
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46098.11687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JV94_9PHAE1.090e-6866.67J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 229..249
NoneNo IPR availableCOILSCoilCoilcoord: 183..222
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 46..250
e-value: 3.9E-11
score: 45.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 51..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46098contigH-elongata_contig46098:1222..3512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46098.11687.1mRNA_H-elongata_contig46098.11687.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46098 1222..3527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46098.11687.1 ID=prot_H-elongata_contig46098.11687.1|Name=mRNA_H-elongata_contig46098.11687.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp
MAPGVARLYASAVRGCGRERDAVALVQALRCRDPSLGWCTDEIARWELFR
GLVEEGKKLASAGGHNSAVGVFTQQVLEAESTCVVPNAEAFCFRGSSRLG
QGKALEALDDCYRALSLLSLEVGRGGGTGGCDPLVGPFASARGMALLVRG
RAYMALSRIGESISDLKGSLKCNPGLTEASEYLRQAEQRQAEASLQRRQR
ERQEREREARAAAAAAAAVEERAKLWAKKKREAAAAASAEAEASRASENG
ASA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf