prot_H-elongata_contig46070.11682.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46070.11682.1
Unique Nameprot_H-elongata_contig46070.11682.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length248
Homology
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 1.410e-107
Identity = 171/248 (68.95%), Postives = 201/248 (81.05%), Query Frame = 0
Query:    1 VTDRSEPDLLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRTSRTQDYSFYRYLPLAAAGVHYLCRSDQRAVVSHPKKDYEARTARSAKRNILQSFVDGRQLAATARTGESVVLDMLSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTFSPRSASGRAEGIGGGGGATFLQGIFAQEFVLEPSIDELVKYEGYDLAHPMLAAPLRPIVAHEVSLAAVRQAE 248
            + DR + D+ EEV  FNDH K++AG+HENFLGVRFNDPTL KA+AA+DWL MADLMDTRT++TQDYSF RY P+AAAGVH+LCRSDQR+ V+ PKKDYEARTAR+AK NIL SF DGRQL AT RT +++VLDMLSHLMDILAP LRPLNPDL+S QERAR   LVG+LLSCGLTFSP+SAS  +          F     AQEF LEP+ID+L+KYEGY+ AHP LA PLRP+VAHEV+L  +R+AE
Sbjct:  591 MADRKDADVFEEVQAFNDHSKVLAGVHENFLGVRFNDPTLSKAAAAMDWLEMADLMDTRTNQTQDYSFSRYAPVAAAGVHFLCRSDQRSTVTQPKKDYEARTARAAKSNILHSFADGRQLGATGRTTQALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRELVGILLSCGLTFSPQSASSSSSA---SAPPAFGAATGAQEFALEPAIDQLLKYEGYEFAHPRLAPPLRPMVAHEVALEGMRKAE 835          
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: A0A836CAX9_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX9_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.080e-32
Identity = 93/245 (37.96%), Postives = 135/245 (55.10%), Query Frame = 0
Query:    9 LLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRT-SRTQDYSFYRYLPLAAAGVHYLCRSDQRA----VVSHPKKDYEARTARSAKRNILQSFVDGRQLAATARTGESVVLDM--LSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTFSPRSASGRAEGIGGGGGATFLQGIFAQEFVLEPSIDELVKYEGYDLAHPMLAAPLRPIVAHEVSLAAVRQ 246
            +  ++  FNDH +++ G+HE +L  +++DP+L ++ AA DWLA AD ++      ++ Y+  RYLP AAAGVH   R D R     + S       AR ARSA    L++F  GR  A++ R G +   ++  L     +LAP LR +  +L+   ER RL  LV  L++CG T +    SG     GG GG        A E+VLEP ID L  +EG  L++  LA P+R +VAHEV +  VR+
Sbjct:  845 VQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSA---ALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSG-----GGXGGD-------ADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRR 1074          
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: W7TIW5_9STRA (Chromosome transmission fidelity n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIW5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.120e-30
Identity = 75/176 (42.61%), Postives = 109/176 (61.93%), Query Frame = 0
Query:    9 LLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRTSRTQDYSFYRYLPLAAAGVHYLCRSDQRAVVSHPKKDYEARTARSAKRNILQSFVDGRQLAAT-ARTGESVVLDMLSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTFSPRSASG 183
            ++  VA ++DH  ++    EN+  +RF DP+L K   A +WLA +DL+  R           +L  AAA +H LCR + R  ++ P+KD+E R+AR ++++ILQSF +G  L A  AR    VVLD++S LM IL P+LRP+NPDL S  E+A L  LV VLL+CG+++     SG
Sbjct:  338 VMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEGLHVMEDLHLATAAA-LHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSG 512          
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: A0A4D9CU49_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU49_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.790e-30
Identity = 76/177 (42.94%), Postives = 110/177 (62.15%), Query Frame = 0
Query:    9 LLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRTSRTQDYSFYRYLPLA-AAGVHYLCRSDQRAVVSHPKKDYEARTARSAKRNILQSFVDGRQLAAT-ARTGESVVLDMLSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTFSPRSASG 183
            ++  VA ++DH  ++    EN+  +RF DP L K   A +WLA +DL+  R  + + +     L LA AA +H LCR + R  ++ P+KD+E R+AR ++++ILQSF +G  L A  AR    VVLD++S LM IL P LRP+NPDL S  E+A L  LV VLL+CG+++     SG
Sbjct:  739 VMASVASYSDHAHVLLAAQENYCQLRFTDPNLTKVLHAAEWLAFSDLVQGR--QMEGHHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQAMWARRPTPVVLDVVSPLMHILNPNLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSG 913          
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: G3WKJ1_SARHA (Chromosome transmission fidelity factor 18 n=3 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3WKJ1_SARHA)

HSP 1 Score: 120 bits (301), Expect = 2.330e-27
Identity = 69/241 (28.63%), Postives = 124/241 (51.45%), Query Frame = 0
Query:    9 LLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRTSRTQDYSFYRYLPLAAAGVHYLCRSDQRAVVSHPKKDYEARTARSAKRNILQSFVDGRQLAATARTG-ESVVLDMLSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTFSPRSASGRAEGIGGGGGATFLQGIFAQEFVLEPSIDELVKYEGYDLAHPMLAAPLRPIVAHEVSLAAVRQAE 248
            +L       DH K+  G+++NFL ++  DPTL    AA+DWL   D++D      Q++   RYLP      H L  ++    +S+P   +EA    +  +N++ S V G   AA +R G +S++L+ L  L+DI++P LRP++  L S++E+ +L  L+ ++L+  LT+                      G++   + L+P+I+E+ ++     A   L    + ++A E+ L  +R+AE
Sbjct:  677 ILHITTSTGDHEKVAQGLYDNFLNMKLKDPTLNSVCAAMDWLIFEDILDQTVRHGQNFQLMRYLPFLPVAFHLLFAANSIPRISYPNSQHEALNKMNQTQNLIMSLVSGVTPAARSRAGPQSLILEALCLLLDIISPKLRPVSTQLYSNKEKQQLANLINIMLAYNLTYHQERTP---------------DGMYT--YKLDPNIEEVCRFPDLP-ARKQLTYQTKQLIAREIDLEKMRRAE 899          
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: A0A673UFC5_SURSU (Chromosome transmission fidelity factor 18 n=1 Tax=Suricata suricatta TaxID=37032 RepID=A0A673UFC5_SURSU)

HSP 1 Score: 118 bits (295), Expect = 1.430e-26
Identity = 74/241 (30.71%), Postives = 121/241 (50.21%), Query Frame = 0
Query:    9 LLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRTSRTQDYSFYRYLPLAAAGVHYLCRSDQRAVVSHPKKDYEARTARSAKRNILQSFVDGRQLAATARTGESV-VLDMLSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTFSPRSASGRAEGIGGGGGATFLQGIFAQEFVLEPSIDELVKYEGYDLAHPMLAAPLRPIVAHEVSLAAVRQAE 248
            +L   A   +  K+V G+ +NFL +R  D +L    AA+DWLA+ DL+      +Q++   RYLP   A  H L  S     ++ P    EA+   S  + ++Q  V G   A  +R    V +LD L  L+DILAP LRP++  L S++E+ +L  LVG++L+  LT+     S                G +   + LEP+++E+ ++       P L    + ++AHE+ +  +R+AE
Sbjct:  585 ILHVAASAGEREKVVQGLFDNFLRLRLRDSSLGAVCAALDWLALDDLLSRAAHHSQNFQLLRYLPFLPAAFHLLFASSHIPRITFPSSQQEAQNRTSRTQALVQMLVSGLTPATRSRAAPQVLILDALCLLLDILAPKLRPVSTQLYSTREKQQLASLVGIMLAYSLTYRQERMS---------------DGHYV--YRLEPNVEEVCRFPELPTRKP-LTYQAKQLIAHEIEMEKMRRAE 807          
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: A0A673U788_SURSU (Chromosome transmission fidelity factor 18 n=2 Tax=Suricata suricatta TaxID=37032 RepID=A0A673U788_SURSU)

HSP 1 Score: 118 bits (295), Expect = 1.460e-26
Identity = 74/241 (30.71%), Postives = 121/241 (50.21%), Query Frame = 0
Query:    9 LLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRTSRTQDYSFYRYLPLAAAGVHYLCRSDQRAVVSHPKKDYEARTARSAKRNILQSFVDGRQLAATARTGESV-VLDMLSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTFSPRSASGRAEGIGGGGGATFLQGIFAQEFVLEPSIDELVKYEGYDLAHPMLAAPLRPIVAHEVSLAAVRQAE 248
            +L   A   +  K+V G+ +NFL +R  D +L    AA+DWLA+ DL+      +Q++   RYLP   A  H L  S     ++ P    EA+   S  + ++Q  V G   A  +R    V +LD L  L+DILAP LRP++  L S++E+ +L  LVG++L+  LT+     S                G +   + LEP+++E+ ++       P L    + ++AHE+ +  +R+AE
Sbjct:  654 ILHVAASAGEREKVVQGLFDNFLRLRLRDSSLGAVCAALDWLALDDLLSRAAHHSQNFQLLRYLPFLPAAFHLLFASSHIPRITFPSSQQEAQNRTSRTQALVQMLVSGLTPATRSRAAPQVLILDALCLLLDILAPKLRPVSTQLYSTREKQQLASLVGIMLAYSLTYRQERMS---------------DGHYV--YRLEPNVEEVCRFPELPTRKP-LTYQAKQLIAHEIEMEKMRRAE 876          
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: A0A8C6RTR0_NANGA (Chromosome transmission fidelity factor 18 n=2 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6RTR0_NANGA)

HSP 1 Score: 117 bits (293), Expect = 2.670e-26
Identity = 76/244 (31.15%), Postives = 126/244 (51.64%), Query Frame = 0
Query:    9 LLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRTSRTQDYSFYRYLPLAAAGVHYLCRSDQRAVVSHPKKDYEARTARSAKRNILQSFVDGRQLAATAR---TGESVVLDMLSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTF-SPRSASGRAEGIGGGGGATFLQGIFAQEFVLEPSIDELVKYEGYDLAHPMLAAPLRPIVAHEVSLAAVRQAE 248
            +L       +H K+V G+ +NFL +R  D +L     A+DWLA  DL++    R+Q +   RYLP   A  H L  S     +  P    EA+T  +  RN +Q+ V G  +A T R   T +++VLD L  L+D+LAP LRP++  L S++E+ +L+ LVG +L+  LT+   R   G+           +L       + LEP+++++ ++       P L    + ++A E+ +  +R+AE
Sbjct:  629 ILHVTTSAGEHEKVVQGLFDNFLRLRLRDSSLGTVCCALDWLAFDDLLEQAAHRSQSFQLLRYLPFLPAAFHVLFASSHVPRILFPSSQQEAQTRMNQTRNQIQTLVSG--MAPTTRSQATPQTLVLDTLCLLLDVLAPKLRPVSTQLYSAREKQQLSSLVGTMLAYSLTYLQERMPDGQ-----------YL-------YRLEPNVEKVCRFPELPARKP-LTYQAKQLIAREIEVEKMRRAE 851          
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: UPI0018640A5C (chromosome transmission fidelity protein 18 homolog n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018640A5C)

HSP 1 Score: 115 bits (289), Expect = 9.130e-26
Identity = 73/242 (30.17%), Postives = 127/242 (52.48%), Query Frame = 0
Query:    9 LLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRTSRTQDYSFYRYLPLAAAGVHYLCRSDQRAVVSHPKKDYEARTARSAKRNILQSFVDGRQLAATARTGESVV-LDMLSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTF-SPRSASGRAEGIGGGGGATFLQGIFAQEFVLEPSIDELVKYEGYDLAHPMLAAPLRPIVAHEVSLAAVRQAE 248
            +L   +   +H K+  G+++NFL ++  DP+L    +A+DWL  +D+++     +Q +S  RYLP   A  H L  +     +++P   YEA T     RN L + +     +  +R G S + LD+LS L++++ P LRP+NP L S +E+ +L  LV  +LS  LT+   RS  G+           +L       ++LEP+++E+V++ G       L    + ++A E+ L  +R+AE
Sbjct:  643 VLHLASSSGEHEKLTQGLYDNFLSMKLKDPSLRGVCSALDWLGFSDVLNEAMLHSQSFSLMRYLPFLPAAFHLLFAATTVPRINYPNSHYEALTRTQHTRNALVAMLAEIPPSIRSRVGMSCLSLDILSMLLEVICPKLRPVNPQLYSVREKQQLVELVDTMLSYNLTYRQDRSPEGQ-----------YL-------YLLEPNVEEVVRFPGLP-PRRQLTYQAKQMIAREIELERMRRAE 865          
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Match: A0A4X2LD57_VOMUR (Chromosome transmission fidelity factor 18 n=5 Tax=Metatheria TaxID=9263 RepID=A0A4X2LD57_VOMUR)

HSP 1 Score: 115 bits (289), Expect = 9.210e-26
Identity = 67/241 (27.80%), Postives = 122/241 (50.62%), Query Frame = 0
Query:    9 LLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWLAMADLMDTRTSRTQDYSFYRYLPLAAAGVHYLCRSDQRAVVSHPKKDYEARTARSAKRNILQSFVDGRQLAATARTG-ESVVLDMLSHLMDILAPALRPLNPDLMSSQERARLNCLVGVLLSCGLTFSPRSASGRAEGIGGGGGATFLQGIFAQEFVLEPSIDELVKYEGYDLAHPMLAAPLRPIVAHEVSLAAVRQAE 248
            +L       DH K+  G+++NFL ++  DPTL     A+DWL   D++D      Q++   RYLP      H L  ++    +S+P   +EA    +  +N++ S V G   AA +R   +S+VL+ L  L+DI++P LRP++  L S++E+ +L  L+ ++L+  LT+                      G++   + L+P+I+++ ++     A   L    + ++A E+ L  +R+AE
Sbjct:  678 ILHITTSTGDHEKVAQGLYDNFLNMKLKDPTLNSVCTAMDWLIFEDILDQTVRHGQNFQLMRYLPFLPVAFHLLFAANSVPRISYPNSQHEALNKMNQTQNLIMSLVSGVTPAARSRAAPQSLVLEALCLLLDIISPKLRPVSTQLYSNREKQQLANLINIMLAYNLTYHQERTP---------------DGMYT--YKLDPNIEDVCRFPDLP-ARKQLTYQTKQLIAREIELEKMRRAE 900          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46070.11682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K262_9PHAE1.410e-10768.95AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CAX9_9STRA2.080e-3237.96AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
W7TIW5_9STRA3.120e-3042.61Chromosome transmission fidelity n=2 Tax=Nannochlo... [more]
A0A4D9CU49_9STRA3.790e-3042.94AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
G3WKJ1_SARHA2.330e-2728.63Chromosome transmission fidelity factor 18 n=3 Tax... [more]
A0A673UFC5_SURSU1.430e-2630.71Chromosome transmission fidelity factor 18 n=1 Tax... [more]
A0A673U788_SURSU1.460e-2630.71Chromosome transmission fidelity factor 18 n=2 Tax... [more]
A0A8C6RTR0_NANGA2.670e-2631.15Chromosome transmission fidelity factor 18 n=2 Tax... [more]
UPI0018640A5C9.130e-2630.17chromosome transmission fidelity protein 18 homolo... [more]
A0A4X2LD57_VOMUR9.210e-2627.80Chromosome transmission fidelity factor 18 n=5 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 9..248
NoneNo IPR availablePANTHERPTHR23389:SF3CHROMOSOME TRANSMISSION FIDELITY PROTEIN 18 HOMOLOGcoord: 9..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46070contigH-elongata_contig46070:486..3491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46070.11682.1mRNA_H-elongata_contig46070.11682.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46070 486..3491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46070.11682.1 ID=prot_H-elongata_contig46070.11682.1|Name=mRNA_H-elongata_contig46070.11682.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp
VTDRSEPDLLEEVAGFNDHGKIVAGIHENFLGVRFNDPTLCKASAAIDWL
AMADLMDTRTSRTQDYSFYRYLPLAAAGVHYLCRSDQRAVVSHPKKDYEA
RTARSAKRNILQSFVDGRQLAATARTGESVVLDMLSHLMDILAPALRPLN
PDLMSSQERARLNCLVGVLLSCGLTFSPRSASGRAEGIGGGGGATFLQGI
FAQEFVLEPSIDELVKYEGYDLAHPMLAAPLRPIVAHEVSLAAVRQAE
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