prot_H-elongata_contig46045.11681.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46045.11681.1
Unique Nameprot_H-elongata_contig46045.11681.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: D8LIR7_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR7_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 2.210e-42
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQV 80
            +QDFLNGVCTN+IVMQ+RQMKYWGGNYDTY RTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQ+
Sbjct:  179 SQDFLNGVCTNIIVMQQRQMKYWGGNYDTYQRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQL 257          
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: A0A6H5J9L9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L9_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 1.030e-41
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQV 80
            +QDFLNGVCTN+IVMQ+RQMKYWGGNYDTY RTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQ+
Sbjct:  271 SQDFLNGVCTNIIVMQQRQMKYWGGNYDTYQRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQL 349          
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: A0A1X6NW09_PORUM (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NW09_PORUM)

HSP 1 Score: 134 bits (337), Expect = 5.300e-35
Identity = 63/79 (79.75%), Postives = 74/79 (93.67%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQV 80
            +QDFL+GVCT+ +VMQERQ+KYWGGNY TY RTR+EQDVNQ+KLYKKQQ EI+HTK FI+SCGT+SNLVRQAKSRQKQ+
Sbjct:  305 SQDFLDGVCTDTMVMQERQLKYWGGNYSTYVRTRKEQDVNQLKLYKKQQEEIKHTKDFISSCGTYSNLVRQAKSRQKQL 383          
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: A0A835ZA40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA40_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.200e-34
Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQV 80
            +QDFLNGVCTNM+VMQERQ++YWGGNYD Y  TR EQD NQ+K+YKKQQ EI HTK FIASCGT+SNL+RQ KSRQKQ+
Sbjct:  270 SQDFLNGVCTNMMVMQERQLRYWGGNYDAYVATRTEQDTNQLKMYKKQQEEIAHTKAFIASCGTYSNLIRQGKSRQKQL 348          
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: A0A7S0QJF4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QJF4_9CRYP)

HSP 1 Score: 123 bits (308), Expect = 3.550e-34
Identity = 56/79 (70.89%), Postives = 69/79 (87.34%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQV 80
            +QDFLNGVC  M+V+++RQ+ YW GNYDTY +TR EQ+ NQ+K+Y KQQ EI+HTK FIASCGTF+NLVRQAKSRQKQ+
Sbjct:   15 SQDFLNGVCNGMMVLRQRQLSYWSGNYDTYLKTRTEQEANQMKMYNKQQEEIKHTKAFIASCGTFANLVRQAKSRQKQL 93          
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: A0A2V3IUK5_9FLOR (Probable ATP-dependent transporter ycf16 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3IUK5_9FLOR)

HSP 1 Score: 128 bits (321), Expect = 8.260e-33
Identity = 59/79 (74.68%), Postives = 73/79 (92.41%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQV 80
            +QDFL+GVCT+ +VMQ++++KYWGGNY TY RTREEQD N++KLYKKQQ EI+H KQFIASCGT++NLVRQAKSRQKQ+
Sbjct:  290 SQDFLDGVCTDTMVMQQQKLKYWGGNYSTYVRTREEQDTNKLKLYKKQQEEIKHIKQFIASCGTYANLVRQAKSRQKQL 368          
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: A0A5J4Z7G4_PORPP (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G4_PORPP)

HSP 1 Score: 125 bits (314), Expect = 7.530e-32
Identity = 58/79 (73.42%), Postives = 72/79 (91.14%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQV 80
            +QDFL+GVCT+ +V+Q +++KYWGGNY  Y +TREEQDVNQ+KLYKKQQ EI+H KQFIASCGT++NLVRQAKSRQKQ+
Sbjct:  283 SQDFLDGVCTDTMVLQRKKLKYWGGNYSQYQKTREEQDVNQMKLYKKQQDEIKHIKQFIASCGTYANLVRQAKSRQKQL 361          
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: A0A0L0SB86_ALLM3 (ABC transporter ATP-binding protein ARB1 n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SB86_ALLM3)

HSP 1 Score: 115 bits (289), Expect = 3.740e-30
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQK 78
            +QDFLNGVCTNMI ++ +++ YWGGNYD Y RTR EQ+ NQ+K Y KQQ EI H K FIASCGT++NLVRQAKSRQK
Sbjct:   56 SQDFLNGVCTNMIDLRNQKLSYWGGNYDAYVRTRAEQETNQMKQYNKQQEEIAHIKAFIASCGTYANLVRQAKSRQK 132          
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: A0A7S3HE41_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE41_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.730e-30
Identity = 55/77 (71.43%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQK 78
            +QDFLN VCT+M+VMQE++++YW GNYD+Y  TR EQ+ NQ+KLYKKQQ EIQ  KQFI+SCGT++NLVRQAKSRQK
Sbjct:  279 SQDFLNAVCTDMMVMQEQKLRYWSGNYDSYLNTRREQETNQIKLYKKQQGEIQEIKQFISSCGTYANLVRQAKSRQK 355          
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Match: A0A7S1DUN0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DUN0_HEMAN)

HSP 1 Score: 117 bits (293), Expect = 7.450e-30
Identity = 53/79 (67.09%), Postives = 68/79 (86.08%), Query Frame = 0
Query:    2 AQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQV 80
            +QDFLNGVC+N++V+Q  ++KYW GNY+ Y +TR EQ+ NQ+KLY KQQ EI+H K+FIASCGTF+NLVRQAKSRQK +
Sbjct:   30 SQDFLNGVCSNIMVLQRSKLKYWAGNYEQYVKTRTEQETNQMKLYAKQQEEIKHAKEFIASCGTFANLVRQAKSRQKML 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46045.11681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIR7_ECTSI2.210e-4293.67Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A6H5J9L9_9PHAE1.030e-4193.67ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A1X6NW09_PORUM5.300e-3579.75Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A835ZA40_9STRA2.200e-3477.22P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S0QJF4_9CRYP3.550e-3470.89Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A2V3IUK5_9FLOR8.260e-3374.68Probable ATP-dependent transporter ycf16 n=2 Tax=R... [more]
A0A5J4Z7G4_PORPP7.530e-3273.42Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A0L0SB86_ALLM33.740e-3070.13ABC transporter ATP-binding protein ARB1 n=1 Tax=A... [more]
A0A7S3HE41_9STRA4.730e-3071.43Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1DUN0_HEMAN7.450e-3067.09Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032781ABC-transporter extension domainPFAMPF12848ABC_tran_Xtncoord: 16..79
e-value: 1.9E-15
score: 56.7
NoneNo IPR availableGENE3D3.40.50.300coord: 2..78
e-value: 7.1E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR19211ATP-BINDING TRANSPORT PROTEIN-RELATEDcoord: 2..79
NoneNo IPR availablePANTHERPTHR19211:SF15ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 2coord: 2..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46045contigH-elongata_contig46045:3498..4191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46045.11681.1mRNA_H-elongata_contig46045.11681.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46045 3498..4191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46045.11681.1 ID=prot_H-elongata_contig46045.11681.1|Name=mRNA_H-elongata_contig46045.11681.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
MAQDFLNGVCTNMIVMQERQMKYWGGNYDTYTRTREEQDVNQVKLYKKQQ
AEIQHTKQFIASCGTFSNLVRQAKSRQKQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032781ABC_tran_Xtn