prot_H-elongata_contig46015.11675.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig46015.11675.1 vs. uniprot
Match: D7G629_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G629_ECTSI) HSP 1 Score: 261 bits (667), Expect = 1.750e-76 Identity = 225/349 (64.47%), Postives = 249/349 (71.35%), Query Frame = 0
Query: 2 GDATVRSIGRHCPNIKSLSMVELTRTTDRSLKXXXXXXXXXXLLDSSSDLNMLERSHRTRVPKLGTDGIREMCVGTRGLEVLRLNGACKITDDALKAVGANCSQLEELSCNLVTDVGIAAVARGSPFLRHLGAGGCVQLTD---ASVRVVAIRAGRRLRVLDVTGCRKVTDHSLEAIGEHCGGLESLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRVQLAGERLPFVARDPGKRELRLCNHPCRVFNAHVQERVEWTASAITVQRIVRGQLCRLRWKRVQQRKACATKALRTGLSSIMATRLFRKQLEWRRTEH 347
GD TVR I RHCP + SLSMVELTRT XXXXXXX LLDSSSD+N+LE SHRTRVPKLG DG+RE+ +GT L VLRLNGACKITDD+L AVG+NC ASVRV+A RAG LRVLD LEAIG HC GLE LTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSRVQLAGERLP V R+PG R LR C PCRVFN+++Q R EWTA+AITVQR +RG+LCRLRW+R +QRKA A LR+ LS++MA RLFR++LE RR+EH
Sbjct: 355 GDGTVRDIARHCPGLTSLSMVELTRTXXXXXXXXXXXXXLLRLLDSSSDINVLETSHRTRVPKLGGDGVRELSLGTPCLTVLRLNGACKITDDSLLAVGSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVRVLAARAGGGLRVLDFXXXXXXXXXXLEAIGSHCRGLEGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGSRVQLAGERLPLVVREPGTRVLRPCALPCRVFNSYIQRRAEWTAAAITVQRTLRGKLCRLRWERGEQRKAWAAMVLRSKLSAVMARRLFRRRLEQRRSEH 703
BLAST of mRNA_H-elongata_contig46015.11675.1 vs. uniprot
Match: UPI00053C24EB (F-box/LRR-repeat protein 4 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C24EB) HSP 1 Score: 62.4 bits (150), Expect = 9.060e-7 Identity = 44/130 (33.85%), Postives = 60/130 (46.15%), Query Frame = 0
Query: 59 RTRVPKLGTDGIREMCVGTRGLEVLRLNGACKITDDALKAVGANCSQLEELSCN--LVTDVGIAAVARGSPFLRHLGAGGCVQLTDASVRVVAIRAGRRLRVLDVTGCRKVTDHSLEAIGEHCGGLESLT 186
R L G+ + G LE L L I+ L ++ C L+ L + D G+AAV + L L C LTDA + VA GR L+ L V K+TD S+EA+G HC LE+L+
Sbjct: 128 RLEPSSLSDAGLTALASGFPQLESLSLIWCSNISSQGLISLAEKCISLKSLDLQGCYIGDQGLAAVGKICKQLEELNLRFCEGLTDAGLIDVAAGCGRSLKSLGVAASAKITDLSMEAVGNHCKFLETLS 257
BLAST of mRNA_H-elongata_contig46015.11675.1 vs. uniprot
Match: A0A6A4M4G5_9ERIC (Uncharacterized protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4M4G5_9ERIC) HSP 1 Score: 60.5 bits (145), Expect = 4.120e-6 Identity = 42/133 (31.58%), Postives = 63/133 (47.37%), Query Frame = 0
Query: 80 LEVLRLNGACKITDDALKAVGANCSQLEELS---CNLVTDVGIA------------------------AVARGSPFLRHL---GAGGCVQLTDASVRVVAIRAGRRLRVLDVTGCRKVTDHSLEAIGEHCGGL 182
L ++ L GAC++TDDALKA+ A+ L+ ++ C+L+TD GI+ VA +HL G + D V V + GR ++ LD+ C K+T+ S+E IG C GL
Sbjct: 482 LAIISLKGACRLTDDALKALVASTPALQSINLGECSLLTDTGISLLAACLGATLRELYIDNCHRIDARVVAHAILEFKHLEVLSVAGIQTVCDEFVVEVITKCGRNMKGLDLADCVKLTNTSMEVIGNTCSGL 614
BLAST of mRNA_H-elongata_contig46015.11675.1 vs. uniprot
Match: A0A1W4V5P2_DROFC (F-box/LRR-repeat protein 13 n=9 Tax=melanogaster group TaxID=32346 RepID=A0A1W4V5P2_DROFC) HSP 1 Score: 59.3 bits (142), Expect = 8.690e-6 Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 0
Query: 78 RGLEVLRLNGACKITDDALKAVGANCSQLEELS---CNLVTDVGIAAVARGSPFLRHLGAGGCVQLTDASVRVVAIRAGRRLRVLDVTGCRKVTDHSLEAIGEHCGGLESL 185
RGL+ L L G ITD ALK G +L LS C+ +T G AV + P L L C+ + D +VR++ + +RLR+L+++ C K+T S+ I H L L
Sbjct: 494 RGLKELNLRGCRNITDRALKH-GLKLPELRALSLGYCSRLTPAGFEAVTQNCPSLEALCVSSCMTMDDETVRII-VSGLKRLRILNLSNCAKLTLQSIHYILAHAHNLVEL 602
BLAST of mRNA_H-elongata_contig46015.11675.1 vs. uniprot
Match: K3X2Z6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2Z6_GLOUD) HSP 1 Score: 57.4 bits (137), Expect = 2.240e-5 Identity = 25/75 (33.33%), Postives = 43/75 (57.33%), Query Frame = 0
Query: 111 CNLVTDVGIAAVARGSPFLRHLGAGGCVQLTDASVRVVAIRAGRRLRVLDVTGCRKVTDHSLEAIGEHCGGLESL 185
C L++ G+ V + L G GC ++ DA++ +A G ++R + V G ++DHSL+A+ +HC GL+ L
Sbjct: 162 CRLMSSAGVNTVVQECKKLSEFGFKGCPKVNDAAMLAIATHCGAQVRRVSVGGSGNISDHSLQALADHCSGLQEL 236
BLAST of mRNA_H-elongata_contig46015.11675.1 vs. uniprot
Match: A0A218WGT7_PUNGR (EIN3-binding F-box protein 1-like n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218WGT7_PUNGR) HSP 1 Score: 57.8 bits (138), Expect = 2.710e-5 Identity = 53/208 (25.48%), Postives = 86/208 (41.35%), Query Frame = 0
Query: 3 DATVRSIGRHCPNIKSLSMVELTRTTDRSLKXXXXXXXXXXLLDSSSDLNMLERSHRTRVPKLGTDGIREMCVGTRGLEVLRLNGACKITDDALKAVG-ANCSQLEELS---CNLVTDVGIAAVARGSPFLRHLGAGG---------------------------CVQLTDASVRVVAIRAGRRLRVLDVTGCRKVTDHSLEAIGEHC 179
D + +G CPN+K + + +D L + ++ L L+ RV ++G G+ C G R L+ L L+ + D + ++C L LS C + G+A V + P L HL G C +TD ++ + + G L++L++ GCRKVTD SLEAI ++C
Sbjct: 372 DVGLEVLGNGCPNLKQVCLQRCYFISDNGL---------LDFVRAAGSLESLQLMELNRVSQVGVIGVLSNC-GAR-LKTLALSECMGVKDFPVAVPDLSSCQSLRCLSIQNCPGFGNAGVALVGKLCPNLHHLEFTGLWGIKDAALLPLLESCEDGLVKVNLSDCPNVTDEAISALVMIHGGTLQMLNIDGCRKVTDASLEAIADNC 568 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46015.11675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig46015.11675.1 ID=prot_H-elongata_contig46015.11675.1|Name=mRNA_H-elongata_contig46015.11675.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=426bpback to top |