prot_H-elongata_contig45955.11669.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig45955.11669.1
Unique Nameprot_H-elongata_contig45955.11669.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length155
Homology
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BLAST of mRNA_H-elongata_contig45955.11669.1 vs. uniprot
Match: A0A6H5L6P2_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6P2_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.710e-65
Identity = 117/155 (75.48%), Postives = 133/155 (85.81%), Query Frame = 0 
Query:    1 MASLILLPSAADRLPSPLKTLTQAPQLTLLLAVGGYLVFLVFFLPLYAISFLVTAAGAWLFLLGGVYMGGRNLTRMISYPGASKQIQRDIELEYTKSVGNRLSSFTNALRLWLQLVQDVTVVPSSMSHFRSLNEEIRDRALGGDMLLLKRAFEEV 155
            +ASL+LLPSAA+RLP P + L Q PQLTL+LA GGY+ FLV FLPLYA+SFLVTA GAWL LLG VYMGGR LTR ISYPGASKQIQRDIELEYTK V +RL SF NALRLWLQLV+DVTVVPS+MSHFR L++E+RDR+ GGD+ +L RA EEV
Sbjct:   22 VASLVLLPSAAERLPFPFRALAQTPQLTLVLAGGGYVTFLVLFLPLYAVSFLVTATGAWLVLLGTVYMGGRGLTRTISYPGASKQIQRDIELEYTKHVSSRLVSFANALRLWLQLVRDVTVVPSAMSHFRVLHQELRDRSRGGDVWVLTRALEEV 176
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BLAST of mRNA_H-elongata_contig45955.11669.1 vs. uniprot
Match: D7FRK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK4_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 6.030e-41
Identity = 78/102 (76.47%), Postives = 87/102 (85.29%), Query Frame = 0 
Query:    1 MASLILLPSAADRLPSPLKTLTQAPQLTLLLAVGGYLVFLVFFLPLYAISFLVTAAGAWLFLLGGVYMGGRNLTRMISYPGASKQIQRDIELEYTKSVGNRL 102
            +ASL+LLPSAA+RLP P + L Q PQLTL+LA GGY+ FLV FLPLYA+SFLVTA GAWL LLG VY+GGR LTR ISYPGASKQIQRDIELEYTK V +RL
Sbjct:   34 VASLVLLPSAAERLPFPFRALAQTPQLTLVLAGGGYVTFLVLFLPLYAVSFLVTATGAWLVLLGTVYVGGRGLTRTISYPGASKQIQRDIELEYTKHVSSRL 135
[Close]
BLAST of mRNA_H-elongata_contig45955.11669.1 vs. uniprot
Match: A0A835YTB0_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB0_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.380e-25
Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 0 
Query:    1 MASLILLPSAADRLPSPLKTLTQAPQLTLLLAVGGYLVFLVFFLPLYAISFLVTAAGAWLFLLGGVYMGGRNLTRMISYPGASKQIQRDIELEYTKSVGNRLSSFTNALRLWLQLVQDVTVVPSSMSHFRSLNEEI 136
            +ASL+LLPSAADRLP P   +T+ P + +      Y  F   +LPLY ISF VT+ GA L L GGV  GGR L R +S+PG+S  ++R+IE EY K    RL++    L+ WLQ+V   +  P +   FR L+ ++
Sbjct:   18 LASLVLLPSAADRLPFPWGPITRTPPVAVACGGAAYAFFFALWLPLYLISFAVTSGGAGLVLAGGVVYGGRALARALSFPGSSSYVRREIEKEYAKYTAARLAAVAMCLKQWLQVVGGSSAFPGNALQFRELHRDV 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig45955.11669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L6P2_9PHAE1.710e-6575.48AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
D7FRK4_ECTSI6.030e-4176.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTB0_9STRA1.380e-2544.12Hydrolase_4 domain-containing protein n=1 Tax=Trib... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 8..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 12..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..68
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 22..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig45955contigH-elongata_contig45955:217..1711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig45955.11669.1mRNA_H-elongata_contig45955.11669.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig45955 217..1717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig45955.11669.1 ID=prot_H-elongata_contig45955.11669.1|Name=mRNA_H-elongata_contig45955.11669.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp
MASLILLPSAADRLPSPLKTLTQAPQLTLLLAVGGYLVFLVFFLPLYAIS
FLVTAAGAWLFLLGGVYMGGRNLTRMISYPGASKQIQRDIELEYTKSVGN
RLSSFTNALRLWLQLVQDVTVVPSSMSHFRSLNEEIRDRALGGDMLLLKR
AFEEV
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