prot_H-elongata_contig45647.11642.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: D7G5K5_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K5_ECTSI) HSP 1 Score: 375 bits (962), Expect = 1.240e-114 Identity = 200/329 (60.79%), Postives = 231/329 (70.21%), Query Frame = 0
Query: 1 LRGAKAEQCQVCMGSCVLFAGLRLQAAXXXXXXXXXXXXXXXXXXXDACSSTNTPSSKRAKGSKSDAGTGTAVGTXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDSKSAAAATPP---ETEGLVKEGRVDVSGLRDAVLAVAEAVPEKAWRPGQWRRVSYPAWRAFVLVATGPRELMQSMLMMEAGIKKEWLAKWWVKGWASPAVAMRIVTLQSVAFRAYALDSAILYEGSSRGGTNADAPAPPTGKKRGRPKSTPSAGPPKGARLFKGFHENTCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAGTPKQV 326
+RGA +QCQVC GSC+LFA RL+AA + ++TP++KR+KG + T + XX K + A P E E VKEG+VDVSGLR AVL +AEAVPEKAW+ GQWRRVSYPAWRAFVLVATGPRELMQ++LMMEAGI KEWLAKWW KGWASPAVAMR+VTLQSVA+RAYALD+A+LYEGSSRGGTNA+AP PP+GKKRGRPKS+PS+GPPKGARLFKG HE TCS+C EGG LICCDYCPAS+HM+PCL + A+DP G WACPLCRAGTPK V
Sbjct: 2729 IRGAPVDQCQVCQGSCMLFASRRLKAASAAAGGLGATAEG---------AGSSTPAAKRSKGGSGASRTEVSS--------------------------KXXGKGGGNRGGAEEPVGREPEAQVKEGKVDVSGLRSAVLQLAEAVPEKAWKTGQWRRVSYPAWRAFVLVATGPRELMQALLMMEAGITKEWLAKWWNKGWASPAVAMRVVTLQSVAYRAYALDAAVLYEGSSRGGTNANAPPPPSGKKRGRPKSSPSSGPPKGARLFKGVHEATCSICGEGGALICCDYCPASFHMEPCLDL------AKDPAGPWACPLCRAGTPKPV 3016
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: A0A6H5J8B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8B2_9PHAE) HSP 1 Score: 361 bits (926), Expect = 8.200e-110 Identity = 195/328 (59.45%), Postives = 222/328 (67.68%), Query Frame = 0
Query: 1 LRGAKAEQCQVCMGSCVLFAGLRLQAAXXXXXXXXXXXXXXXXXXXDACSSTNTPSSKRAKGSKSDAGTGTAVGTXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDSKSAAAATPP--ETEGLVKEGRVDVSGLRDAVLAVAEAVPEKAWRPGQWRRVSYPAWRAFVLVATGPRELMQSMLMMEAGIKKEWLAKWWVKGWASPAVAMRIVTLQSVAFRAYALDSAILYEGSSRGGTNADAPAPPTGKKRGRPKSTPSAGPPKGARLFKGFHENTCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAGTPKQV 326
+RGA +QCQVC GSC+LFA RL+AA + +TP++KR+KG + T + K A P E E VKEG+VDVSGLR AVL VAEAVPEKAW+ GQWRRVSYPAWRAFVLVATGPRELMQ++LMMEAGI KEWLAKW ASPAVAMR+VTLQSVA+RAYALD+A+LYEGSSRGGTN +AP PP+GKKRGRPKS+PS+GPPKGARLFKG HE TCSMC EGG LICCDYCPAS+HM+PCL + A+DP G WACPLCRAGTPK V
Sbjct: 2154 IRGAPVDQCQVCQGSCMLFASRRLKAASAASGGLGATAEG---------AGLSTPAAKRSKGGSGASRTEVSS--------------------------KKKGKGGNRGGAEEPVGLEPEAQVKEGKVDVSGLRSAVLQVAEAVPEKAWKTGQWRRVSYPAWRAFVLVATGPRELMQALLMMEAGITKEWLAKWXXXXXASPAVAMRVVTLQSVAYRAYALDAAVLYEGSSRGGTNPNAPPPPSGKKRGRPKSSPSSGPPKGARLFKGVHEATCSMCGEGGALICCDYCPASFHMEPCLEL------AKDPAGPWACPLCRAGTPKPV 2440
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: D8UEW1_VOLCA (PHD-type domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UEW1_VOLCA) HSP 1 Score: 58.9 bits (141), Expect = 1.650e-7 Identity = 28/65 (43.08%), Postives = 35/65 (53.85%), Query Frame = 0
Query: 257 PPKGARLFKGFHENTCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAG 321
PP F + C +C GG+LICCD CPA+YH++ C+G T A P G W CP C G
Sbjct: 4 PPAQTNAFDDGNTENCVLCGVGGSLICCDRCPAAYHLR-CIGQT----AHSIPDGDWLCPECAVG 63
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: A0A6A3AMG6_HIBSY (Galactose oxidase/kelch repeat superfamily protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AMG6_HIBSY) HSP 1 Score: 63.5 bits (153), Expect = 1.740e-7 Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 0
Query: 249 PKSTPSAGPPKGAR----LFKGFHENTCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAG 321
P++ P PK + LF+ ++ CS C GG LICCDYCP+++HM+ CLG+ + P G W CP C G
Sbjct: 248 PRTRPIVESPKTVKAADDLFRNENDEVCSACYNGGDLICCDYCPSTFHMK-CLGLKEV------PNGPWFCPSCCCG 317
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: I0YIG1_COCSC (PHD-type domain-containing protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIG1_COCSC) HSP 1 Score: 56.2 bits (134), Expect = 7.180e-7 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0
Query: 270 NTCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAG 321
+ C +C +GG+L+CCD CPASYH++ C+G A P G W CP C G
Sbjct: 5 DNCCLCNQGGSLLCCDGCPASYHLR-CIG----EQAKSLPEGEWLCPECALG 51
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: A0A835YD59_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YD59_9CHLO) HSP 1 Score: 59.7 bits (143), Expect = 4.350e-6 Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0
Query: 271 TCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAGT 322
TC +C GG+L+CCD CPA+YHM+ C+G + ARN P+G W CP C AG+
Sbjct: 624 TCVLCGVGGSLLCCDMCPAAYHMK-CIGES-ARNL---PSGEWRCPECVAGS 670
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: A0A154P0K3_DUFNO (PHD finger protein 12 n=1 Tax=Dufourea novaeangliae TaxID=178035 RepID=A0A154P0K3_DUFNO) HSP 1 Score: 59.3 bits (142), Expect = 4.410e-6 Identity = 28/65 (43.08%), Postives = 36/65 (55.38%), Query Frame = 0
Query: 262 RLFKGFHENTCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAGTPKQV 326
R +G + +TC C +GG LICCD CPASYH+Q A + A P G W C CR + K +
Sbjct: 49 RRGRGHNRDTCDACRDGGELICCDKCPASYHLQCHY---PAVDPADIPNGEWLCYACRCASKKNL 110
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: A0A212F2A3_DANPL (PHD finger protein 12 isoform X1 n=4 Tax=Danaus TaxID=13036 RepID=A0A212F2A3_DANPL) HSP 1 Score: 59.3 bits (142), Expect = 4.730e-6 Identity = 29/64 (45.31%), Postives = 36/64 (56.25%), Query Frame = 0
Query: 262 RLFKGFHENTCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAGTPKQ 325
R KG + ++C C EGG LICCD CPAS+H+ C N P G+W C C+AG KQ
Sbjct: 44 RPGKGHNHDSCDACREGGDLICCDRCPASFHLG-CYDPPLEENDI--PAGSWLCRECKAGDEKQ 104
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: A0A6A2Y693_HIBSY (Galactose oxidase/kelch repeat superfamily protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Y693_HIBSY) HSP 1 Score: 58.9 bits (141), Expect = 5.570e-6 Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 263 LFKGFHENTCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAG 321
LF+ H+ S C GG LICCDYCP+++HM+ CLG+ + N DP W CP C G
Sbjct: 267 LFRDEHDEVFSACYNGGDLICCDYCPSTFHMK-CLGLKEVPN---DP---WFCPSCCCG 318
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Match: A0A835M552_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835M552_9MAGN) HSP 1 Score: 58.9 bits (141), Expect = 7.010e-6 Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query: 262 RLFKGFHENTCSMCEEGGTLICCDYCPASYHMQPCLGMTKARNAARDPTGAWACPLCRAG 321
R+ + CS+C+ GG LI CDYCP+SYH+ C+ + + A P G W CP C+ G
Sbjct: 562 RMSSDQSDTICSVCQYGGKLIICDYCPSSYHLS-CVDLKVYPSVADVPDGKWFCPSCQCG 620 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig45647.11642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig45647.11642.1 ID=prot_H-elongata_contig45647.11642.1|Name=mRNA_H-elongata_contig45647.11642.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=326bpback to top |