prot_H-elongata_contig45623.11639.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig45623.11639.1
Unique Name	prot_H-elongata_contig45623.11639.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	117

Homology

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BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: D7G0L9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L9_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 4.950e-27
Identity = 58/102 (56.86%), Postives = 72/102 (70.59%), Query Frame = 0

Query:    3 NLLINCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSISSAARSY--PWMDYHFVFYASAAVMILLANLGWRTLTTDILMMP 102
            N L NC   AV +ALSI ST +VP + RGKL GL+NTAESLGRF+GP  Y+  YA+S+S +       W+D+ FVFYASAA + L+A L WRTLTT+ LM P
Sbjct:  335 NTLANCSCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPSTLDAFGGWVDHRFVFYASAAALALVAALAWRTLTTENLMKP 436

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BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: A0A6H5JH24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH24_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.900e-26
Identity = 59/122 (48.36%), Postives = 83/122 (68.03%), Query Frame = 0

Query:    1 MSNLLINCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSIS-SAARSYP-WMDYHFVFYASAAVMILLANLGWRTLTTDILMMP----APVDVEVAAEEETP 116
            ++N LI C + ++++ALS+ ST +VP   RGKL GLYNTAESLGRF GPV Y+T+YA+S+S S   ++  W+DYHFVFY SA  ++++  + WRTLT + LM      A VDV    ++  P
Sbjct:  275 VANNLILCSLGSITLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTLEAFGGWVDYHFVFYLSALALVVVGVMAWRTLTVENLMSEEFDRADVDVAHPTDKTVP 396

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BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: A0A6H5JRQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ3_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 5.620e-26
Identity = 58/102 (56.86%), Postives = 71/102 (69.61%), Query Frame = 0

Query:    3 NLLINCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSISSAARSY--PWMDYHFVFYASAAVMILLANLGWRTLTTDILMMP 102
            N L NC   AV +ALSI ST +VP + RGKL GL+NTAESLGRF+GP  Y+  YA+S+S +       W+DY FVF ASAA + L+A L WRTLTT+ LM P
Sbjct:  501 NTLANCSCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPSTLDAFGGWVDYRFVFDASAAALALVAALAWRTLTTENLMKP 602

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BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: A0A6H5K449_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K449_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 2.700e-25
Identity = 55/100 (55.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:    5 LINCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSISSAARSY--PWMDYHFVFYASAAVMILLANLGWRTLTTDILMMP 102
            L NC   AV +ALSI ST +VP + RGKL GL+NTAESLGRF+GP  Y+  YA+S+S +       W+DY FVF  SAA + L+A L WRTL T+ LM P
Sbjct:  168 LANCGCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPSTLDAFGGWVDYRFVFNVSAAALALVAALAWRTLATENLMKP 267

[Close]

BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.320e-25
Identity = 59/122 (48.36%), Postives = 82/122 (67.21%), Query Frame = 0

Query:    1 MSNLLINCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSIS-SAARSYP-WMDYHFVFYASAAVMILLANLGWRTLTTDILMMP----APVDVEVAAEEETP 116
            ++N LI C + ++S+ALS+ ST +VP   RGKL GLYNTAESLGRF GPV Y+T+YA+S+S S   ++  W+DYH VF ASA  ++++  + WRTLT + LM      A VDV    ++  P
Sbjct:  445 VANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTLEAFGGWVDYHLVFCASALALVVVGVMAWRTLTVESLMSEELDRADVDVVHPTDKTVP 566

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BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: D8LJX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX7_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.520e-22
Identity = 49/100 (49.00%), Postives = 71/100 (71.00%), Query Frame = 0

Query:    3 NLLINCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSIS--SAARSYPWMDYHFVFYASAAVMILLANLGWRTLTTDILM 100
            N   +C ++AV++A+S+ ST +VP   RGKL GLYN AESLGRFLGP  ++ +YA+S+S  S+A  + W+++ FVF+ SA ++ L A L W TLT + LM
Sbjct:  283 NTFASCGLAAVTLAMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAITYAWSVSPSSSAAGFDWVNFRFVFWVSAVLLALCAVLAWPTLTAENLM 382

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BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: A0A6H5K5T8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T8_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 4.870e-22
Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query:    3 NLLINCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSIS--SAARSYPWMDYHFVFYASAAVMILLANLGWRTLTTDILM 100
            N   +C ++AV++ +S+ ST +VP   RGKL GLYN AESLGRFLGP  ++ SYA+S+S  S+A    W+++ FVF+ASA ++ + A L W TLT + LM
Sbjct:  451 NTFASCGLAAVALTMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAISYAWSVSPSSSAAGVDWVNFRFVFWASAVLLAMCAVLAWSTLTAENLM 550

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BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: D8LET0_ECTSI (Major facilitator superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET0_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 6.890e-22
Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = 0

Query:    6 INCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSISSAARSYPWMDYHFVFYASAAVMILLANLGWRTLTTDI 98
            +NCC++AVSIAL++AST+IVP   RGKLSGLY TAES GRF   V ++  +A+SISS   +  W+D+ FVFY+SA  + +   + WRTL  ++
Sbjct:  156 VNCCLAAVSIALAVASTSIVPSSLRGKLSGLYGTAESFGRFTSAVGFAALFAWSISS--DNLGWVDHRFVFYSSALALGVATVVAWRTLPAEV 246

[Close]

BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 4.750e-20
Identity = 53/103 (51.46%), Postives = 68/103 (66.02%), Query Frame = 0

Query:    7 NCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSISSAARSYPWMDYHFVFYASAAVMILLANLGWRTLTTDILM-MPAPVDVE 108
            NCC++AV IAL++AST+IVP   RGKLSGLY TAES GRF   V     +A+SISS      W+D+ FVFY+SA  + +   + WRTL  +IL   PA  +VE
Sbjct:  393 NCCLAAVGIALAVASTSIVPSRLRGKLSGLYGTAESFGRFASAVGSGVLFAWSISSDNPD--WVDHRFVFYSSALSLGVATVVAWRTLPAEILGDKPAAENVE 493

[Close]

BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Match: D8LET3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET3_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 9.150e-19
Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 0

Query:    6 INCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPVAYSTSYAFSISSAARSYPWMDYHFVFYASAAVMILLANLGWRTLTTDI 98
            +NCC++AVSI L++AST+IVP   RGKLSGLY++A SLGRF   V ++  +A+SISS       +D+ FVFY+ A  + +   + WRTL  ++
Sbjct:   73 VNCCLAAVSITLTVASTSIVPSRLRGKLSGLYSSAGSLGRFTSAVGFAVLFAWSISSDILGL--IDHRFVFYSCALALGVATVVAWRTLPAEV 163

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot

BLAST of mRNA_H-elongata_contig45623.11639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
D7G0L9_ECTSI	4.950e-27	56.86	MFS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JH24_9PHAE	1.900e-26	48.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRQ3_9PHAE	5.620e-26	56.86	MFS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K449_9PHAE	2.700e-25	55.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G0M0_ECTSI	3.320e-25	48.36	MFS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LJX7_ECTSI	1.520e-22	49.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K5T8_9PHAE	4.870e-22	49.00	MFS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LET0_ECTSI	6.890e-22	51.61	Major facilitator superfamily n=1 Tax=Ectocarpus s...	[more]
D8LJK9_ECTSI	4.750e-20	51.46	MFS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LET3_ECTSI	9.150e-19	47.31	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 2..98 e-value: 1.3E-9 score: 39.7
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 74..91
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..73
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 92..116
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.542
None	No IPR available	TMHMM	TMhelix		coord: 69..91
None	No IPR available	TMHMM	TMhelix		coord: 5..27
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 1..116 score: 8.698
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 5..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig45623	contig	H-elongata_contig45623:1785..3731 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig45623.11639.1	mRNA_H-elongata_contig45623.11639.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig45623 1632..3959 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig45623.11639.1 ID=prot_H-elongata_contig45623.11639.1|Name=mRNA_H-elongata_contig45623.11639.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
MSNLLINCCISAVSIALSIASTNIVPPHHRGKLSGLYNTAESLGRFLGPV
AYSTSYAFSISSAARSYPWMDYHFVFYASAAVMILLANLGWRTLTTDILM
MPAPVDVEVAAEEETP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020846	MFS_dom
IPR036259	MFS_trans_sf