prot_H-elongata_contig45568.11634.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig45568.11634.1
Unique Nameprot_H-elongata_contig45568.11634.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
BLAST of mRNA_H-elongata_contig45568.11634.1 vs. uniprot
Match: D7FQ34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ34_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 2.090e-53
Identity = 86/118 (72.88%), Postives = 97/118 (82.20%), Query Frame = 0
Query:    1 RDTPLQVDRAKDILHPPVNKTAFKIIRNVRLPSGKRAALNPPPVSVFSLEPYEKPDAFMASIRGKHREKWVVTDPATGEKLDFCVRLHRDRMKPKPHKACARLKHPPLTPSEMQGPRW 118
            RDTPLQ DRAKDILHPP+NKTAFKI+RN RLPSGK A L P PVS FSLEP+ +P+ F  SIRG H+E+W   DP TG+K DF +RLH DRMK K HKACARLKHPPL+PSEM+GPRW
Sbjct:  734 RDTPLQTDRAKDILHPPINKTAFKIVRNARLPSGKSAPLRPAPVSAFSLEPFAEPEDFTVSIRGNHQERWAAADPVTGDKKDFFLRLHGDRMKVKSHKACARLKHPPLSPSEMKGPRW 851          
BLAST of mRNA_H-elongata_contig45568.11634.1 vs. uniprot
Match: A0A7S3YKX3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKX3_HETAK)

HSP 1 Score: 100 bits (249), Expect = 1.070e-23
Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 0
Query:    1 RDTPLQVDRAKDILHPPVNKTAFKIIRNVRLPSGKRAALNPPPVSVFSLEPYEKPDAFMASIRGKHREKWVVTDPATGEKLDFCVRLHRDRMKPKPHKACARLKHPPLTPSEMQGPRW 118
            +D P QVDR ++IL  P  K + +I+RN RLPSGKR  +  PP+S+ + E YE P  F A +R  + E ++ TD ATG+KL F   +HR+  K K   + +  KHP L  +EM GPRW
Sbjct:  126 KDRPAQVDRQREILDGPALKKSLRIVRNARLPSGKRVPMKAPPISINNDE-YEDPKDFTADLRADNPEFYIATD-ATGKKLPFTRHIHRNTFKEKSTVSTSSRKHPQLALAEMSGPRW 241          
BLAST of mRNA_H-elongata_contig45568.11634.1 vs. uniprot
Match: A0A7S1U4M0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4M0_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.260e-22
Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    1 RDTPLQVDRAKDILHPPVNKTAFKIIRNVRLPSGKRAALNPPPVSVFSLEPYEKPDAFMASIRGKHREKWVVTDPATGEKLDFCVRLHRDRMKPKPHKACARLKHPPLTPSEMQGPRW 118
            RD P+Q +R  DILH  V   A +I+RN +LPSGK+      P S+F+ + Y+ P  F   +R    E +  TDP TG+ L F  ++HRD MKPK     ++ +  PLT S+  GP+W
Sbjct:  665 RDRPMQTERRNDILHGKVKNKALRIVRNAKLPSGKKIPFRQAPYSIFTRDQYKDPRDFTLDLRPDDPEHFYGTDPKTGQTLPFVTKIHRDVMKPKSQTIQSKRRIQPLTQSDRVGPKW 782          
BLAST of mRNA_H-elongata_contig45568.11634.1 vs. uniprot
Match: A0A8J2S3F3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3F3_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.080e-12
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 0
Query:    1 RDTPLQVDRAKDILHPPVNKTAFKIIRNVRLPSGKRAALNPPPVSVFSLEPYEKPDAFMASIRGKHREKWVVTDPATGEKLDFCVRLHRDRMKPKPHKACARLKHPPLTPSEMQG-PRW 118
            +D P   DR  DIL  P  K A K++RN +LPSG+R  + P P S+F+   +++ + F  ++R     +    D A GE +DF  R+HRD M+    K        P+   E+ G PRW
Sbjct: 1081 KDRPDACDRTSDILKDPPKKYALKLVRNAKLPSGRRVKMTPAPFSIFATGEFKEEERFDRTLRNYGGPEDFPKD-AQGEPIDFQTRIHRDIMRRASEKILCGKTITPVEAHEVYGDPRW 1198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig45568.11634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FQ34_ECTSI2.090e-5372.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3YKX3_HETAK1.070e-2344.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1U4M0_9STRA7.260e-2240.68Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2S3F3_9STRA2.080e-1235.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig45568contigH-elongata_contig45568:1309..1662 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig45568.11634.1mRNA_H-elongata_contig45568.11634.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig45568 1309..1662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig45568.11634.1 ID=prot_H-elongata_contig45568.11634.1|Name=mRNA_H-elongata_contig45568.11634.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
RDTPLQVDRAKDILHPPVNKTAFKIIRNVRLPSGKRAALNPPPVSVFSLE
PYEKPDAFMASIRGKHREKWVVTDPATGEKLDFCVRLHRDRMKPKPHKAC
ARLKHPPLTPSEMQGPRW
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