prot_H-elongata_contig45528.11631.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig45528.11631.1
Unique Nameprot_H-elongata_contig45528.11631.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
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BLAST of mRNA_H-elongata_contig45528.11631.1 vs. uniprot
Match: D7FXT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT1_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 2.730e-20
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0 
Query:    1 GLACQGAGRRESAEEYFRLSLELDPLMWVSIQSLCELGADFDVEKHF 47
            GLACQGAGRRESAE YFRLSLELDPL+WV+IQSLCELG + DV+KHF
Sbjct:  172 GLACQGAGRRESAEHYFRLSLELDPLLWVNIQSLCELGVELDVDKHF 218
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BLAST of mRNA_H-elongata_contig45528.11631.1 vs. uniprot
Match: A0A448YYH5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYH5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.190e-8
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0 
Query:    1 GLACQGAGRRESAEEYFRLSLELDPLMWVSIQSLCELGA-DFDVEKHF 47
            G  C+ + RR  A EY+R+SL+LDPLMWVS ++LCE+GA D D    F
Sbjct:  202 GNICRSSNRRRRAMEYYRMSLQLDPLMWVSYEALCEMGAVDIDPTSVF 249
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BLAST of mRNA_H-elongata_contig45528.11631.1 vs. uniprot
Match: A0A835YV22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV22_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.790e-6
Identity = 22/47 (46.81%), Postives = 27/47 (57.45%), Query Frame = 0 
Query:    1 GLACQGAGRRESAEEYFRLSLELDPLMWVSIQSLCELGADFDVEKHF 47
            G  CQ   R   A  YFRLSL LDP++W S +SLC++G   D    F
Sbjct:  125 GKICQATDRHGQAAAYFRLSLVLDPMLWSSFESLCDMGQAVDTSSCF 171
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig45528.11631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXT1_ECTSI2.730e-2085.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A448YYH5_9STRA3.190e-854.17Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A835YV22_9STRA4.790e-646.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..47
e-value: 4.8E-11
score: 44.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig45528contigH-elongata_contig45528:3786..3926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig45528.11631.1mRNA_H-elongata_contig45528.11631.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig45528 3786..3926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig45528.11631.1 ID=prot_H-elongata_contig45528.11631.1|Name=mRNA_H-elongata_contig45528.11631.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
GLACQGAGRRESAEEYFRLSLELDPLMWVSIQSLCELGADFDVEKHF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf