prot_H-elongata_contig45506.11628.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig45506.11628.1
Unique Nameprot_H-elongata_contig45506.11628.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length153
Homology
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: D7FMF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF7_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 1.680e-55
Identity = 115/193 (59.59%), Postives = 131/193 (67.88%), Query Frame = 0
Query:    1 LVPGTVSQNLSTLAMDKEYKLKRARRKEARGDNRDLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVLQGTV-STKRLLSVSKSSTDS-------------------------------------W--GVGQVRPRRVLYGPERALRSYVIEDARAAALL 153
            L+ GTVSQNL+TLAMDKEYKLKRARRK+ARG+N+D+LDGIGSAG SLARGLTDGVSGLI+NP++GAE GG+ GFAK  GT +LGLVVKPVVGVTDAATD+LQG   +T  +  + K S  +                                     W  GVGQVRPRRVLYG  R LR Y IEDARAAALL
Sbjct:  438 LITGTVSQNLTTLAMDKEYKLKRARRKDARGENKDVLDGIGSAGGSLARGLTDGVSGLIKNPLKGAESGGLAGFAKGVGTGMLGLVVKPVVGVTDAATDLLQGVRGTTASIAQIGKPSPSASPYHQTAGPPSAGHGRGGSLGAAGXXXXXXXXXXXXXWDEGVGQVRPRRVLYGSMRTLRPYAIEDARAAALL 630          
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 4.830e-44
Identity = 84/103 (81.55%), Postives = 95/103 (92.23%), Query Frame = 0
Query:    1 LVPGTVSQNLSTLAMDKEYKLKRARRKEARGDNRDLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVLQG 103
            L+ GTVSQNL+TLAMDKEYKLKRARRK+ARG+N+D+LDGIGSAG SLARGLTDGVSGLI+NP++GAE GG  GFAK  GT +LGLVVKPVVGVTDAATD+LQG
Sbjct:  791 LITGTVSQNLTTLAMDKEYKLKRARRKDARGENKDVLDGIGSAGGSLARGLTDGVSGLIKNPLKGAESGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDLLQG 893          
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: A0A7S0CCM6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCM6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 4.460e-30
Identity = 70/153 (45.75%), Postives = 100/153 (65.36%), Query Frame = 0
Query:    1 LVPGTVSQNLSTLAMDKEYKLKRARRKEARGDNRDLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVLQGTVSTKRLLSVSKSSTDSWGVGQVRPRRVLYGPERALRSYVIEDARAAALL 153
            L+  T+S+N++ L +D++Y  +R R+   R +  + ++G+GS G    +G+ DGV+G+ R PMRGAE+ GV GFAK  G  +LGL+VKPV+G+TDAATDV+ G   +            +  V Q+RPRR LYG ERALRSY I DA A+ L+
Sbjct:  493 LLTETLSKNMAVLTLDRKYAQRRDRKSLDR-EGGNFVEGVGSGGVKFFKGVMDGVTGVYRAPMRGAEKRGVEGFAKGVGKGLLGLLVKPVIGLTDAATDVMIGVKGSVECGGGGLKLRGTRRVQQIRPRRALYGRERALRSYNIADASASLLM 644          
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: A0A7S2LN01_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LN01_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.020e-29
Identity = 72/159 (45.28%), Postives = 98/159 (61.64%), Query Frame = 0
Query:    1 LVPGTVSQNLSTLAMDKEYKLKRAR---RKEARGDNRDLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVL---QGTVSTKRLLSVSKSSTDSWGVGQVRPRRVLYGPERALRSYVIEDARAAALL 153
            L+  T+S+N++ L +D+ Y  KR R   +    G    ++DGIG+    L +G+ DGVSG+IR PMRGAE+GG  GFAK  G  +LGLVVKPVVG++DAATD++   +G+V       + K         Q+RPRRV YG ER +R Y   DA AA L+
Sbjct:  398 LLTQTLSKNMAVLTLDRRYAQKRDRSLHQSNPSGATPTIVDGIGTGSAKLLKGVYDGVSGVIRAPMRGAEKGGPEGFAKGVGKGLLGLVVKPVVGLSDAATDIMIGVKGSVEGGTYNDIGKMQQRIKRASQLRPRRVFYGRERTIREYKQSDATAAQLM 556          
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: A0A7S2PQX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQX2_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.180e-29
Identity = 72/159 (45.28%), Postives = 98/159 (61.64%), Query Frame = 0
Query:    1 LVPGTVSQNLSTLAMDKEYKLKRAR---RKEARGDNRDLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVL---QGTVSTKRLLSVSKSSTDSWGVGQVRPRRVLYGPERALRSYVIEDARAAALL 153
            L+  T+S+N++ L +D+ Y  KR R   +    G    ++DGIG+    L +G+ DGVSG+IR PMRGAE+GG  GFAK  G  +LGLVVKPVVG++DAATD++   +G+V       + K         Q+RPRRV YG ER +R Y   DA AA L+
Sbjct:  609 LLTQTLSKNMAVLTLDRRYAQKRDRSLHQSNPSGATPTIVDGIGTGSAKLLKGVYDGVSGVIRAPMRGAEKGGPEGFAKGVGKGLLGLVVKPVVGLSDAATDIMIGVKGSVEGGTYNDIGKMQQRIKRASQLRPRRVFYGRERTIREYKQSDATAAQLM 767          
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: A0A4D9D9K3_9STRA (FYVE-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9K3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.070e-26
Identity = 71/168 (42.26%), Postives = 96/168 (57.14%), Query Frame = 0
Query:    2 VPGTVSQNLSTLAMDKEYKLKRARRKEARGDNR-----------------DLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVLQGTVSTKRLLSVSKSSTDSWGVGQVRPRRVLYGPERALRSYVIEDARAAAL 152
            V   V + LS LA DKEY+L R R +E                       D+L+G+G  G+ L RGL DGV+G++  P+RGAER G  G  K  G X+LGLVVKPVVG+ DAA+DVLQG   T      + ++  +  + Q+RP+R +YG ER L+ Y + DA+A  L
Sbjct: 4112 VMENVGKQLSCLAFDKEYRLARERGREGEAGXXXXXXXXXXXXXXXXRPADVLEGLGLGGKRLMRGLVDGVTGVVAAPVRGAEREGFRGMVKGMGKXMLGLVVKPVVGLADAASDVLQGVQGT------AGAALTAEALSQLRPKRAVYGEERRLKPYDMADAQAQML 4273          
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: A0A7S2WGV8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WGV8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.480e-25
Identity = 60/145 (41.38%), Postives = 93/145 (64.14%), Query Frame = 0
Query:   10 LSTLAMDKEYKLKRARRKEARGDNRDLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVLQGTVSTKRLLSVSKSSTD-SWGVGQVRPRRVLYGPERALRSYVIEDARAAALL 153
            ++ L +D+ Y  +R R K + G +    +G+ S    L RG+ +GV+G++R P++GAE+ GV GFAK  G  +LGL+VKPV+G++DAATDV+ G   +  +   ++++   S+   Q+RPRR  +G +R L  Y IEDA AA LL
Sbjct:    1 MAVLTLDRNYAQRRDRLKNSDGVSTTFAEGVESGVIKLIRGIVEGVTGVVRAPIKGAEKRGVEGFAKGIGKGLLGLLVKPVIGLSDAATDVMIGVKGS--IKGTNRNNLPLSFQFQQIRPRRTFHGQDRTLHQYSIEDATAALLL 143          
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: A0A1E7F6J4_9STRA (PDZ domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6J4_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.880e-25
Identity = 65/156 (41.67%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    1 LVPGTVSQNLSTLAMDKEYKLKRARRKEAR--GDNR-DLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVLQGTVSTKRLLSVSKSSTDSWGVGQVRPRRVLYGPERALRSYVIEDARAAALL 153
            L+  T S+NL+ + +D+ Y  KR RRK  R   D++  L  G+ S    L +G  +GV+G++R P+RGAE+ G+ GF K  G  +LGL+VKP++G+TDAATDV+ G  ST       + +       Q RPRR LYG ++ L+ Y +EDA A+ L+
Sbjct: 5603 LLMETFSKNLAVVTLDRRYAQKRDRRKSLRLKSDSKVTLAGGVESGFMKLVQGFKEGVTGVVRAPIRGAEKRGLEGFCKGIGKGLLGLLVKPIIGITDAATDVMIGVKSTVEYKEAQRQNLALLR-NQFRPRRPLYGRDKVLKPYNMEDAAASTLM 5757          
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: A0A448Z3P9_9STRA (PDZ domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3P9_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.650e-25
Identity = 66/156 (42.31%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    1 LVPGTVSQNLSTLAMDKEYKLKRARRKEAR--GDNR-DLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVLQGTVSTKRLLSVSKSSTDSWGVGQVRPRRVLYGPERALRSYVIEDARAAALL 153
            L+  T S+ ++ + +D+ Y  KR RRK  R   D +  L+ G+ S    L  G  +GV+G++R P+RGAE+ G+ GFAK  G  +LGL+VKP++G+TDAATDV+ G  ST     V K +       Q RPRR +YG ++ LR + +EDA AA L+
Sbjct: 5545 LLMETFSKYMAVVTLDRRYAQKRDRRKSLRMKSDAKVTLVGGVESGFLKLVTGFREGVTGVVRAPIRGAEKRGLEGFAKGLGKGLLGLLVKPIIGITDAATDVMIGVKSTVEYKEVQKENLALLR-NQFRPRRPMYGRDKVLRPFCMEDAAAATLM 5699          
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Match: A0A1E7EIG7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EIG7_9STRA)

HSP 1 Score: 108 bits (271), Expect = 6.770e-25
Identity = 64/156 (41.03%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    1 LVPGTVSQNLSTLAMDKEYKLKRARRKEAR--GDNR-DLLDGIGSAGESLARGLTDGVSGLIRNPMRGAERGGVTGFAKXXGTXVLGLVVKPVVGVTDAATDVLQGTVSTKRLLSVSKSSTDSWGVGQVRPRRVLYGPERALRSYVIEDARAAALL 153
            L+  T S+NL+ + +D+ Y  KR RR+  R   D++  L  G+ S    L +G  +GV+G++R P+RGAE+ G+ GF K  G  +LGL+VKP++G+TDAATDV+ G  ST       + +       Q RPRR LYG ++ L+ Y +EDA A+ L+
Sbjct:  237 LLMETFSKNLAVVTLDRRYAQKRDRRRSLRLKSDSKVTLAGGVESGFMKLVQGFKEGVTGVVRAPIRGAEKRGLEGFCKGIGKGLLGLLVKPIIGITDAATDVMIGVKSTVEYKEAQRQNLALLR-NQFRPRRPLYGRDKVLKPYNMEDAAASTLM 391          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig45506.11628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMF7_ECTSI1.680e-5559.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXT8_9PHAE4.830e-4481.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0CCM6_9STRA4.460e-3045.75Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2LN01_9STRA1.020e-2945.28Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2PQX2_9STRA1.180e-2945.28Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A4D9D9K3_9STRA4.070e-2642.26FYVE-type domain-containing protein n=2 Tax=Monodo... [more]
A0A7S2WGV8_9STRA1.480e-2541.38Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7F6J4_9STRA4.880e-2541.67PDZ domain-containing protein n=1 Tax=Fragilariops... [more]
A0A448Z3P9_9STRA6.650e-2542.31PDZ domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A1E7EIG7_9STRA6.770e-2541.03Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015412Autophagy-related, C-terminalPFAMPF09333ATG_Ccoord: 35..105
e-value: 7.1E-12
score: 45.5
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 4..150
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 4..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig45506contigH-elongata_contig45506:1420..3416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig45506.11628.1mRNA_H-elongata_contig45506.11628.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig45506 1420..3416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig45506.11628.1 ID=prot_H-elongata_contig45506.11628.1|Name=mRNA_H-elongata_contig45506.11628.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp
LVPGTVSQNLSTLAMDKEYKLKRARRKEARGDNRDLLDGIGSAGESLARG
LTDGVSGLIRNPMRGAERGGVTGFAKGVGTGVLGLVVKPVVGVTDAATDV
LQGTVSTKRLLSVSKSSTDSWGVGQVRPRRVLYGPERALRSYVIEDARAA
ALL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015412Autophagy-rel_C
IPR026847VPS13