prot_H-elongata_contig4549.11623.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4549.11623.1
Unique Nameprot_H-elongata_contig4549.11623.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length185
Homology
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: D8LQ56_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE), Vesicle-associated membrane protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ56_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 5.790e-95
Identity = 157/186 (84.41%), Postives = 172/186 (92.47%), Query Frame = 0
Query:    1 MANPDTFVEPRKRYSSEGTMFSIHFVADDEHRVYNCVTDKEYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVFQNRSSALRRQMKCKAIKMWLLLAXXXXXXXXXXXVPVVNHFKD 184
            M+NPDTFVEPRKRYS EG MFSIHFVADD +R+Y+CVTDKEYPARIAF LLEE Q KFLTKVG+KSLTA+EG LSRTMKSSFSDLC+KY+DIR VDRM+A  DKVDVVK+TMQDNIQQMLANEERLDQIS+NAE+LNEQAKVFQNRSSALRRQM+CKAIKMWLLLA XXXXXXXXXXVP+  H K+
Sbjct:   37 MSNPDTFVEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKN 222          
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: A0A835YU71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU71_9STRA)

HSP 1 Score: 206 bits (524), Expect = 6.730e-63
Identity = 109/209 (52.15%), Postives = 148/209 (70.81%), Query Frame = 0
Query:    1 MANPDTFVEPRKRYSSEGTMFSIHFVADDEHRVYNCVTDKEYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVF-----------------------QNRSSALRRQMKCKAIKMWLLLAXXXXXXXXXXXVPVVNHFKD 184
            +++P+ FVEP +RY++EG +  +HFVADD +RVY  VTDK+YPAR+AFALL+E+Q+KFLTKVGEKSL+A+E +LSRTM+SSF+D+CLKY+D++ VD++++   KVD VK  M++NI QMLANEE L+ IS NAE+LNEQA+                         QNRS+ALRR M+CKA+KMW LLA           VP+  + K+
Sbjct:   38 ISSPNVFVEPGRRYTNEGDVCCVHFVADDSNRVYTVVTDKQYPARVAFALLDEVQSKFLTKVGEKSLSAKEDTLSRTMRSSFADICLKYDDVKNVDKLASVQGKVDAVKTKMEENISQMLANEETLESISANAENLNEQARXXXXXXXXXXXXXXXXXXXXXXXXXQNRSTALRRNMRCKALKMWFLLAFVITIVLIIIIVPLAMYSKN 246          
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: A0A7S2XW80_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW80_9STRA)

HSP 1 Score: 125 bits (314), Expect = 5.910e-34
Identity = 59/112 (52.68%), Postives = 86/112 (76.79%), Query Frame = 0
Query:   13 RYSSEGTMFSIHFVADDEHRVYNCVTDKEYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEE 122
            RYS+EG  F++HFV D+ HR+Y  +T K+YP+R+AF LLEE+Q+KFL KVG++SL+ +EG L+ T K  F+++C +YED+   D+++A   KVDVVK  M+DNI +ML N+E
Sbjct:    1 RYSTEGVEFTLHFVGDERHRLYCVITAKDYPSRVAFTLLEELQSKFLDKVGDRSLSVKEGGLNGTCKKMFTNICHRYEDVEGADKLAAVQGKVDVVKSIMEDNISKMLKNQE 112          
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: A0A6V2A733_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A733_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.570e-25
Identity = 60/165 (36.36%), Postives = 98/165 (59.39%), Query Frame = 0
Query:   17 EGTMFSIHFVADDEHRVYNCVTDKEYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVFQNRSSALRRQMKCKAIKMWLLLAXXXXXXXXXXXVPVV 179
            + T+  + + AD +      +T ++YP+R+A  +L E+  +F    G ++ +A   SL++  K   S +C KY D+  VD+ SA  DKVD VK++MQDNI  ML N E+ + ++  +E LNEQA VF+ +S+ L++QMKCK +KM ++L            VP++
Sbjct:  105 QSTVHQVVYGADMDGLCLAVITGQKYPSRVAIQMLTELYGQFSQNFGLQAKSATTNSLTKKSKPMLSSICKKYSDLNNVDKASALIDKVDQVKISMQDNIAVMLKNTEQAETLADKSEQLNEQATVFKKKSTDLKKQMKCKNLKMTIILGLLIFGILAVILVPLI 269          
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: A0A7S2KAE4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAE4_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.100e-24
Identity = 57/170 (33.53%), Postives = 96/170 (56.47%), Query Frame = 0
Query:   17 EGTMFSIHFVADDEHRVYNCVTDKEYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVFQNRSSALRRQMKCKAIKMWLLLAXXXXXXXXXXXVPVVNHFKD 184
            E T+  + + AD + R    +T  +YP+R+A  ++ E+   F+ K G  +++A   SL++       + C KY+D+ +VD+ S+  +KV+ VK+ MQDNI  ML N E  +++   +  LNEQA VF+  S+ L++ MKCK +KM +LL            VP++   +D
Sbjct:   84 ESTVHQVTYGADGDGRCIAVITGLQYPSRVAVQMITELHKTFIEKFGLMAMSATTNSLTKKATPMLKEACKKYDDLSSVDKTSSVLEKVEGVKIQMQDNIAAMLVNTETAEELQDKSSQLNEQASVFKKNSTTLKKHMKCKNLKMTILLVLVVVGVLAIILVPLILRAQD 253          
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: W7U318_9STRA (R-snare vamp72-family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U318_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.070e-23
Identity = 59/173 (34.10%), Postives = 96/173 (55.49%), Query Frame = 0
Query:    8 VEPRKRYSSEGTMFSIHFVADDEHRVYNCVTDKEYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVFQNRSSALRRQMKCKAIKMWLLLAXXXXXXXXXXXVPV 178
            V P   +S      S H ++D E R++  ++++ YP R A A LEE Q  FL K G KSL  +E  L ++       LC KY+++  VD+++A  +KVD VK+ +Q+N+Q  LAN   LD I + AE L  QA +F+  ++ L++QM  K ++M +++            +P+
Sbjct:   49 VRPGVHFSFASGGSSWHLMSDVEGRIFILISERTYPVRAAHACLEEFQRSFLAKTGTKSLEVKEKGLDKSSGEMLRKLCEKYDNLAEVDKLAAVMNKVDAVKLVLQENVQVALANCVALDNIEKAAEDLQAQAGMFKRNATTLKKQMCWKQLRMKMVMGLAILAILLVIIIPI 221          
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: A0A7R9Z383_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z383_9STRA)

HSP 1 Score: 101 bits (252), Expect = 9.680e-23
Identity = 56/170 (32.94%), Postives = 100/170 (58.82%), Query Frame = 0
Query:   17 EGTMFSIHFVADDEHRVYNCVTDKEYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVFQNRSSALRRQMKCKAIKMWLLLAXXXXXXXXXXXVPVVNHFKD 184
            +  +  + + AD +      +T  +YP+R+A  +L E+  ++  + G ++ +A   SL++  K   S +C KY+D+  VD+ S+   KV+ VK+ MQDNI  ML N E+ + +++ +++LNEQA VF+ +S+ LR+QM+CK +KM L+L            VP++   K+
Sbjct:  124 QSEVHQVVYGADTDGLCLAVITGLQYPSRVAIQMLVELYGQYSEQFGLQAKSATTNSLTKKSKPMLSTMCNKYDDLSNVDKASSLIGKVEEVKVQMQDNIAAMLKNTEQAESLAERSDALNEQASVFKKKSTDLRKQMRCKNLKMTLILVFLIVGILAIILVPLIMKAKN 293          
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: A0A7S3Q7P0_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7P0_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.100e-22
Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 0
Query:   37 VTDKEYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVFQNRSSALRRQMKCKAIKMWLLLAXXXXXXXXXXXVPVVNHFK 183
            VT   YP+R+A  +L E   ++ TK+G++   A   SL+R  K   +  C KY+D+  VD+ SA   KVD VK+ MQDNI  ML N E+ + IS  A  LNE   VF+ +S+ L+RQMKCK +KM +++A           +P+++  K
Sbjct:  103 VTGLRYPSRVATQMLTECYGEYSTKMGDEIKDAATNSLNRKSKPILTKFCKKYDDVNNVDKASALIGKVDGVKVQMQDNIATMLQNMEQTEAISDQANQLNEXXXVFKKQSTDLKRQMKCKNLKMTIIVAVLVLGILLVILLPLISKAK 251          
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: A0A7S2XMG5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMG5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.300e-21
Identity = 61/188 (32.45%), Postives = 97/188 (51.60%), Query Frame = 0
Query:    9 EPRKRYSSEGTMFSIHFVADDEHRVYNCVTDK----------EYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVFQNRSSALRRQMKCKAIKMWLLLAXXXXXXXXXXXVPVVNHFKD 184
            +P    S  G +     V  D H+V     DK          +YP+R A  +L E+  KF  K G ++ +A   SL+   K     +C KY+D+  VD+  +   +VD VK  MQ+NI  ML+N E+ D +++ +  LNEQA VF+ +S+ L++ M+CK +KM L+LA           +P++   K+
Sbjct:   61 DPPGSVSDAGVIGGFKVVTSDMHQVIYGADDKGLCLCVIAGLKYPSRTAIQMLTELYGKFAPKFGLQAKSATVNSLTTKSKPMLRAVCEKYDDLSKVDKAKSVLGQVDSVKGKMQNNIAGMLSNTEKADSLAERSNQLNEQASVFKKKSTDLKKHMRCKNLKMTLILAGVVIGILCIILIPLIRKSKE 248          
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Match: T0S118_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S118_SAPDV)

HSP 1 Score: 96.3 bits (238), Expect = 6.590e-21
Identity = 56/158 (35.44%), Postives = 88/158 (55.70%), Query Frame = 0
Query:    8 VEPRKRYSSEGTMFSIHFVADDEHRVYNCVTDKEYPARIAFALLEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA--DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVFQNRSSALRRQMKCKAIKMWLLL 163
            V P  R++ +      HF  D++  VY  +T  +YP R+AF LL  +Q +   K   K  T +EG L +      S +   Y+D   VD+++    +VD VK TMQ+NIQ +L+N E+++ + Q +  L+EQAKVF+N   +L R M  K +K+ + L
Sbjct:   55 VAPNSRHTLDCEPNKFHFTMDNDEIVYVAITAADYPVRLAFKLLAAVQEEMTGKHAAKLPTVKEGGLDKECAKGLSVIATTYDDRTKVDKLAEVMAQVDAVKSTMQENIQVVLSNTEKMEMVEQKSNDLSEQAKVFRNTGKSLSRAMWWKNVKLTIAL 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4549.11623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ56_ECTSI5.790e-9584.41Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835YU71_9STRA6.730e-6352.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XW80_9STRA5.910e-3452.68Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6V2A733_9STRA1.570e-2536.36Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S2KAE4_9STRA1.100e-2433.53Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
W7U318_9STRA3.070e-2334.10R-snare vamp72-family n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7R9Z383_9STRA9.680e-2332.94Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3Q7P0_9STRA1.100e-2239.60Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2XMG5_9STRA2.300e-2132.45Hypothetical protein n=1 Tax=Attheya septentrional... [more]
T0S118_SAPDV6.590e-2135.44Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..151
NoneNo IPR availableGENE3D1.20.5.110coord: 96..179
e-value: 1.5E-19
score: 71.5
NoneNo IPR availableGENE3D3.30.450.50coord: 6..95
e-value: 4.0E-13
score: 51.5
NoneNo IPR availablePANTHERPTHR21136SNARE PROTEINScoord: 12..176
NoneNo IPR availablePANTHERPTHR21136:SF168GENE, 35911-RELATEDcoord: 12..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..179
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 101..155
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
IPR001388SynaptobrevinPRINTSPR00219SYNAPTOBREVNcoord: 120..139
score: 23.38
coord: 156..175
score: 32.3
coord: 100..119
score: 28.51
IPR001388SynaptobrevinPFAMPF00957Synaptobrevincoord: 100..179
e-value: 9.8E-23
score: 79.8
IPR001388SynaptobrevinPROSITEPS50892V_SNAREcoord: 95..155
score: 9.782
IPR010908Longin domainPFAMPF13774Longincoord: 12..69
e-value: 2.8E-11
score: 43.3
IPR010908Longin domainPROSITEPS50859LONGINcoord: 1..86
score: 13.756
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 11..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4549contigH-elongata_contig4549:6456..8278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4549.11623.1mRNA_H-elongata_contig4549.11623.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4549 6456..8284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4549.11623.1 ID=prot_H-elongata_contig4549.11623.1|Name=mRNA_H-elongata_contig4549.11623.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp
MANPDTFVEPRKRYSSEGTMFSIHFVADDEHRVYNCVTDKEYPARIAFAL
LEEMQAKFLTKVGEKSLTAREGSLSRTMKSSFSDLCLKYEDIRTVDRMSA
DKVDVVKMTMQDNIQQMLANEERLDQISQNAESLNEQAKVFQNRSSALRR
QMKCKAIKMWLLLAVVVIILLIVIIVPVVNHFKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001388Synaptobrevin
IPR010908Longin_dom
IPR011012Longin-like_dom_sf