prot_H-elongata_contig45449.11620.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig45449.11620.1
Unique Nameprot_H-elongata_contig45449.11620.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length171
Homology
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: D7FJV0_ECTSI (Ribosome production factor 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJV0_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 9.650e-87
Identity = 132/164 (80.49%), Postives = 145/164 (88.41%), Query Frame = 0
Query:    1 MPSKNINPKQLKAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLAKRVGSKPALVFLGERWGREETYRKLQNILV 164
            MPS+NI PKQ  AK LRA+RKREPQVHE AK AI+IKGRKTSQDV DALKD+YRLK PDA+MFSK+ND NPM+DETSAEFLM KNDC+L  FGSHNKKRPNN+ LGRTFDGHMLDMIELGLV YRGL +L GLAKRVGSKPA VF GE+WGREE YRKLQN+L+
Sbjct:    1 MPSRNIIPKQGNAKALRAKRKREPQVHENAKTAIIIKGRKTSQDVTDALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCSLFCFGSHNKKRPNNVVLGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLL 164          
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: A0A835ZC15_9STRA (Ribosome production factor 2 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC15_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.000e-58
Identity = 94/164 (57.32%), Postives = 121/164 (73.78%), Query Frame = 0
Query:    1 MPSKNINPKQLKAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLAKRVGSKPALVFLGERWGREETYRKLQNILV 164
            MP +NI PKQ K  V RA+  R P+V E  K A+ I+G+KTS+ ++  L D+YR+K P + M  +RNDL P DDET  EFL  KND +L  FGSHNKKRPNN+ LGRTFDGH+LDM+E+G+  YRG+D+  G AKRVGSKPA++F G+ W  EE YRKL+N+L+
Sbjct:    1 MPRQNIAPKQDKGHVRRAKEARAPKVVENTKTALCIRGKKTSESISTLLTDMYRMKKPFSRMLGRRNDLTPFDDETGIEFLTTKNDSSLFLFGSHNKKRPNNIVLGRTFDGHILDMMEMGVTAYRGIDEFRGSAKRVGSKPAMLFEGDLWENEEKYRKLRNLLI 164          
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: A0A7S4DDE5_HETAK (Ribosome production factor 2 homolog (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDE5_HETAK)

HSP 1 Score: 173 bits (439), Expect = 1.620e-52
Identity = 88/155 (56.77%), Postives = 117/155 (75.48%), Query Frame = 0
Query:    1 MPSKNINPKQLKAK--VLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDL-PGLAKRVGSKPALVFLGERWGR 152
            M  + I PK++K K  V RA ++REP++ E  KKA++I+G+KTS+ +N +LKDLYRLK P  +MF++ ND+ P +DET  EFL GKNDC+L A GSHNKKRP+NL LGR FDGH+LDM+ELG+  +  ++ +   LAKRVGSKPALVF G+ W R
Sbjct:    1 MAKQTIKPKEVKQKPRVKRALKEREPKLVENTKKALIIRGKKTSEVINLSLKDLYRLKKPHGLMFARHNDVQPFEDETKIEFLCGKNDCSLFALGSHNKKRPHNLILGRLFDGHLLDMVELGVADFASVEMVGAALAKRVGSKPALVFQGDLWDR 155          
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: A0A7S2UZD7_9STRA (Ribosome production factor 2 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.440e-45
Identity = 80/167 (47.90%), Postives = 119/167 (71.26%), Query Frame = 0
Query:    1 MPSKNINPKQL--KAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLA-KRVGSKPALVFLGERWGREETYRKLQNILV 164
            M  + I PK+   KA+V+R +R+R P++ E  K ++V++G KTSQ + +ALKD++R+K P + M S+ ND++P +DE+  EFL  KNDC+L AFGSHNKKRP+NL LGRT+DG +LDM ELG+  ++ + +    A KR+GSKP +VF G+ W  E   + L+N+L+
Sbjct:    1 MGKQTIQPKETRKKARVIRMQRERAPKLKENTKSSLVLRGNKTSQIIFEALKDIHRVKNPHSRMLSRNNDIHPFEDESKMEFLCEKNDCSLFAFGSHNKKRPHNLVLGRTYDGRLLDMFELGVEKFKSVVETKAKAPKRIGSKPCIVFQGDEWEVEGPLKSLKNLLL 167          
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: A0A8K1FC18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FC18_PYTOL)

HSP 1 Score: 159 bits (403), Expect = 7.110e-45
Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 0
Query:    8 PKQLKAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLAKRV-GSKPALVFLGERWGREETYRKLQNILV 164
            PK+ KA V+RA + +EP++ E  K  ++++G KTS +VN  L+DL  LK PDA M  K+ND++P DDET  EFL  KND +L   GS+ KKRPNNL LGRTFDGH+LD++EL    ++ +DD    +K+  GSKPA VF G++W   ET+ KL+N+L+
Sbjct:   40 PKRQKAHVVRAIKNKEPKLVENTKGLLIMRGNKTSDEVNKLLRDLRMLKAPDAKMMGKKNDIHPFDDETKIEFLTQKNDTSLFMVGSNTKKRPNNLVLGRTFDGHILDIMELEFSNFKSIDDFKCKSKKAPGSKPAFVFTGDQWESNETFAKLKNLLI 197          
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: A0A2D4BFM4_PYTIN (Ribosome production factor 2 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFM4_PYTIN)

HSP 1 Score: 158 bits (399), Expect = 2.490e-44
Identity = 80/158 (50.63%), Postives = 108/158 (68.35%), Query Frame = 0
Query:    8 PKQLKAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLAKRV-GSKPALVFLGERWGREETYRKLQNILV 164
            PK+ KA V+RA + REP++ E  KK +V++G KTS++V   L+DL  LK P+  M SK+ND++P DDET  EFL  KND +L   GSH KKRPNNL LGRTFDGH+LDM+EL    Y+ ++     +K+  GSKP  VF G+ W   E + KL+N+L+
Sbjct:   40 PKRQKAHVVRALKDREPKLVENTKKLLVMRGNKTSEEVTKLLRDLRMLKAPEVKMMSKKNDIHPFDDETKVEFLTQKNDTSLFMVGSHTKKRPNNLVLGRTFDGHILDMMELEFTNYKSIEAFQCKSKKAPGSKPCFVFTGDLWDTHELFGKLKNLLI 197          
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: A0A1V9ZW29_9STRA (Ribosome production factor 2 homolog n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZW29_9STRA)

HSP 1 Score: 156 bits (395), Expect = 8.330e-44
Identity = 78/160 (48.75%), Postives = 110/160 (68.75%), Query Frame = 0
Query:    6 INPKQLKAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLAKRV-GSKPALVFLGERWGREETYRKLQNILV 164
            I PK++KAKV RA + +EP++ E  K+ +V++G KT++DVN+ L+DL  +K PD+   +K+N+L+P DD  S EFL  KND +L   GS  KKRPNN+  GRTFDGH++DMIE+G   ++ +DD    +K   GSKP  VF G  W   E Y+KL+NIL+
Sbjct:   31 IKPKRVKAKVARAIKHKEPKLVENTKQLLVLRGNKTNEDVNNLLRDLRMIKAPDSKSLAKKNELHPFDDANSVEFLTTKNDTSLFLLGSSTKKRPNNIIFGRTFDGHLMDMIEMGFENFKSIDDFKIKSKMAPGSKPCFVFSGNEWETIEEYQKLKNILL 190          
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: A0A7S0CNA9_9STRA (Ribosome production factor 2 homolog n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CNA9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 6.690e-43
Identity = 79/157 (50.32%), Postives = 107/157 (68.15%), Query Frame = 0
Query:    9 KQLKAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLAK-RVGSKPALVFLGERWGREETYRKLQNILV 164
            KQ  A+V R  + +E Q+HE  K A+++KG K S  ++  LKDL  +  P A + SK ND+ P DD +S EFL  KNDC L    SHNKKRPNNL +GRTFD  +LDM ELGL+ Y+ L D  G+ K R+GSKP ++FLG++W  ++ ++KLQN+LV
Sbjct:   21 KQPNARVARYLKSQESQMHEGPKNALLMKGIKCSGGMSVVLKDLRSILAPSAKLLSKNNDIVPFDDASSIEFLSTKNDCCLFGMASHNKKRPNNLVIGRTFDHQILDMAELGLIHYKSLFDYRGMPKKRLGSKPMMLFLGDKWHLDDEWKKLQNLLV 177          
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: A0A1Y1Z1K2_9FUNG (Ribosome production factor 2 homolog n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z1K2_9FUNG)

HSP 1 Score: 152 bits (383), Expect = 3.420e-42
Identity = 82/159 (51.57%), Postives = 106/159 (66.67%), Query Frame = 0
Query:    6 INPKQLKAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLAKRVGSKPALVFLGERWGREETYRKLQNILV 164
            I PK  ++K  RA  KREP+V E  K A+ I+G +TSQ VNDAL DLY LK PDAI F+K+N ++P DD+TS EF   KND +L   G+H+KKRP+NL LGRTFD  +LDM+ELG+     + +       VG KP  VF GE W + E Y KL+N+L+
Sbjct:    5 IKPKNARSK--RAFEKREPKVVENTKTALFIRGSQTSQIVNDALNDLYSLKKPDAINFTKKNQIHPFDDDTSLEFFSKKNDTSLFVVGTHSKKRPHNLILGRTFDHQILDMLELGIERATPIKEFKSSKCAVGMKPCFVFNGEIWDQREDYSKLKNMLL 161          
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Match: A0A7S0CL36_9STRA (Ribosome production factor 2 homolog n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CL36_9STRA)

HSP 1 Score: 152 bits (384), Expect = 5.300e-42
Identity = 79/157 (50.32%), Postives = 107/157 (68.15%), Query Frame = 0
Query:    9 KQLKAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALKDLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRPNNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLAK-RVGSKPALVFLGERWGREETYRKLQNILV 164
            KQ  A+V R  + +E Q+HE  K A+++KG K S  ++  LKDL  +  P A + SK ND+ P DD +S EFL  KNDC L    SHNKKRPNNL +GRTFD  +LDM ELGL+ Y+ L D  G+ K R+GSKP ++FLG++W  ++ ++KLQN+LV
Sbjct:   21 KQPNARVARYLKSQESQMHEGPKNALLMKGIKCSGGMSVVLKDLRSILAPSAKLLSKNNDIVPFDDASSIEFLSTKNDCCLFGMASHNKKRPNNLVIGRTFDHQILDMAELGLIHYKSLFDYRGMPKKRLGSKPMMLFLGDKWHLDDEWKKLQNLLV 177          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig45449.11620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJV0_ECTSI9.650e-8780.49Ribosome production factor 2 homolog n=2 Tax=Ectoc... [more]
A0A835ZC15_9STRA2.000e-5857.32Ribosome production factor 2 homolog n=1 Tax=Tribo... [more]
A0A7S4DDE5_HETAK1.620e-5256.77Ribosome production factor 2 homolog (Fragment) n=... [more]
A0A7S2UZD7_9STRA4.440e-4547.90Ribosome production factor 2 homolog n=1 Tax=Fibro... [more]
A0A8K1FC18_PYTOL7.110e-4550.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BFM4_PYTIN2.490e-4450.63Ribosome production factor 2 homolog n=1 Tax=Pythi... [more]
A0A1V9ZW29_9STRA8.330e-4448.75Ribosome production factor 2 homolog n=1 Tax=Thrau... [more]
A0A7S0CNA9_9STRA6.690e-4350.32Ribosome production factor 2 homolog n=1 Tax=Probo... [more]
A0A1Y1Z1K2_9FUNG3.420e-4251.57Ribosome production factor 2 homolog n=1 Tax=Basid... [more]
A0A7S0CL36_9STRA5.300e-4250.32Ribosome production factor 2 homolog n=1 Tax=Probo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007109Brix domainSMARTSM00879Brix_2coord: 34..170
e-value: 2.4E-4
score: 24.9
IPR007109Brix domainPFAMPF04427Brixcoord: 38..163
e-value: 2.7E-20
score: 73.3
IPR007109Brix domainPROSITEPS50833BRIXcoord: 31..170
score: 16.765
IPR039770Ribosome biogenesis protein Rpf2PANTHERPTHR12728BRIX DOMAIN CONTAINING PROTEINcoord: 4..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig45449contigH-elongata_contig45449:1080..2861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig45449.11620.1mRNA_H-elongata_contig45449.11620.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig45449 1080..2861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig45449.11620.1 ID=prot_H-elongata_contig45449.11620.1|Name=mRNA_H-elongata_contig45449.11620.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
MPSKNINPKQLKAKVLRARRKREPQVHEPAKKAIVIKGRKTSQDVNDALK
DLYRLKLPDAIMFSKRNDLNPMDDETSAEFLMGKNDCALVAFGSHNKKRP
NNLTLGRTFDGHMLDMIELGLVGYRGLDDLPGLAKRVGSKPALVFLGERW
GREETYRKLQNILVGKTPLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007109Brix
IPR039770Rpf2